FFCP PHASE1:Mm9::chr9:114691104..114691116,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=102545|HGNC=|MCL_coexpression_id=115|UniProt=Q9ESD6|association_with_transcript=0bp_to_NM_001252479,NM_133978_5end|description=CAGE_peak_2_at_Cmtm7_5end|id=chr9:114691104..114691116,-|ontology_enrichment_celltype=CL:0000988!1.53e-09!32;CL:0002032!1.53e-09!32;CL:0000037!1.53e-09!32;CL:0000566!1.53e-09!32;CL:0000837!1.53e-09!32;CL:0002320!1.00e-08!46;CL:0000134!1.00e-08!46;CL:0000219!2.25e-07!54;CL:0000063!3.24e-07!66;CL:0000738!9.82e-07!17;CL:0002087!9.82e-07!17|ontology_enrichment_celltype_v019_2=CL:0000988,5.59e-10,32;CL:0002032,5.59e-10,32;CL:0000037,5.59e-10,32;CL:0000837,5.59e-10,32;CL:0002320,1.29e-09,46;CL:0000134,1.29e-09,46;CL:0000219,3.41e-08,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!1.81e-19!48;UBERON:0002390!9.10e-19!45;UBERON:0003061!9.10e-19!45;UBERON:0000926!1.45e-14!193;UBERON:0004120!1.45e-14!193;UBERON:0006603!1.45e-14!193;UBERON:0003081!2.88e-14!88;UBERON:0002405!2.18e-13!70;UBERON:0002204!1.78e-10!32;UBERON:0004177!3.17e-10!29;UBERON:0002371!1.39e-09!16;UBERON:0001474!1.55e-09!22;UBERON:0004765!1.55e-09!22;UBERON:0001434!1.55e-09!22;UBERON:0002384!1.00e-08!46;UBERON:0003104!1.50e-08!131;UBERON:0009142!1.50e-08!131;UBERON:0000072!6.04e-08!27;UBERON:0003408!6.63e-08!24;UBERON:0002370!1.28e-07!23;UBERON:0000974!1.28e-07!23;UBERON:0004807!1.28e-07!23;UBERON:0005058!1.28e-07!23;UBERON:0003351!1.28e-07!23;UBERON:0009113!1.28e-07!23;UBERON:0003295!1.28e-07!23;UBERON:0009722!1.28e-07!23;UBERON:0005562!1.28e-07!23;UBERON:0007690!1.28e-07!23;UBERON:0001004!3.57e-07!42;UBERON:0006562!6.06e-07!24;UBERON:0001557!6.06e-07!24;UBERON:0001042!6.06e-07!24;UBERON:0008814!6.06e-07!24;UBERON:0009145!6.06e-07!24;UBERON:0000065!6.64e-07!41|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.58e-19,48;UBERON:0002405,1.58e-19,48;UBERON:0002390,8.12e-19,45;UBERON:0003061,8.12e-19,45;UBERON:0000926,1.23e-14,120;UBERON:0004120,1.23e-14,120;UBERON:0006603,1.23e-14,120;UBERON:0003081,2.18e-13,87;UBERON:0002204,1.79e-10,32;UBERON:0004177,3.51e-10,29;UBERON:0005057,3.51e-10,29;UBERON:0000077,5.80e-10,35;UBERON:0002371,1.08e-09,16;UBERON:0001474,1.20e-09,22;UBERON:0004765,1.20e-09,22;UBERON:0001434,1.20e-09,22;UBERON:0002384,1.29e-09,46;UBERON:0003408,7.72e-08,24;UBERON:0000072,1.03e-07,27;UBERON:0002370,1.50e-07,23;UBERON:0000974,1.50e-07,23;UBERON:0004807,1.50e-07,23;UBERON:0005058,1.50e-07,23;UBERON:0003351,1.50e-07,23;UBERON:0009113,1.50e-07,23;UBERON:0003295,1.50e-07,23;UBERON:0009722,1.50e-07,23;UBERON:0005562,1.50e-07,23;UBERON:0007690,1.50e-07,23;UBERON:0001004,5.28e-07,42;UBERON:0000065,9.82e-07,41|phase1_expression=1.12104192973356,1.04692622291808,1.36499771816861,0,0,1.84667199103079,3.73780224952841,8.00564605337773,21.2590970449017,8.66038747391376,6.16384685611818,4.14815226775749,3.42401459862411,0.874204024189974,6.66219523631325,10.3262386368811,2.09868563438444,58.8336938393113,46.8931362931627,61.5364995107144,1.10556277196391,56.297969330902,52.7623574060649,3.35984087866154,4.81759490241057,3.44539178469012,0.86152399231815,0.861884930743556,0.380046838912748,0.504060259519861,2.66076612786366,0,0,0,1.73310971850765,2.49351968037739,2.85837098767317,12.1374172913703,13.2827008569046,6.80580867165938,14.1175557127443,19.1252735788365,17.4783727091215,2.39203954153597,2.63580021170738,3.30384153891027,22.6893489860931,1.09012578190223,1.5378032791413,0.194429899074283,5.03951117851305,1.43752564364972,64.4285207261708,2.17608642603403,9.07453257684653,3.34437266846731,3.72493471920384,3.6097046459421,0.404632921719196,0,0,5.42151251310611,16.8966011261116,18.8978940629094,24.7216590641744,19.1829631035447,8.68840320503374,11.9107674649682,0.207379224616955,0.270011876663381,0.210324961351382,1.42825492201902,0.883474163806454,0.244981598429908,0.191690942036473,0,1.10115880999389,0.510749352340751,0.46081959976873,0.395658863190582,0.0914876436024097,0,1.11673199600552,0,0.763991238884051,0.589257170947335,0.711858403995515,0.372798891650601,1.51452386666368,1.43585964202892,2.02905142091174,1.72084775396277,0,0,0,0,3.08977724289854,3.91989741929533,5.97507810586598,3.88673531961374,1.12674735821344,7.69958864485907,5.09610479413291,7.11066703153331,6.49473123033642,5.06719730950197,6.0662933401774,2.2836775943812,4.14300613835475,1.92974780784272,3.29622120855658,2.13125834818499,4.15107895060905,4.97384713823654,2.93971767839262,2.26199864393416,10.6293836125781,0.722996784599558,11.4999371753484,4.52947179852746,13.9130156630048,11.1521308221101,0,0.878342391034642,0.209446706813455,1.53274233125155,58.4697807588891,67.7890086022551,56.8003915016599,0.599162557619291,1.37250180845588,0,0.173824320192276,0.511430914660661,0.20778804455956,0.648965052271031,3.66621709861139,12.3162900903992,2.0217820674694,0.210441855886474,1.82168620147785,1.83921683546778,0.900310649026746,1.35634336052144,3.40182495756639,2.8185018462667,3.18585863503078,0.258703370739016,1.07783996466421,0.567318240503458,0.879755620819744,0.8767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| ||
|EntrezGene=102545 | |||
|HGNC= | |||
|MCL_coexpression_id=115 | |||
|UniProt=Q9ESD6 | |||
|association_with_transcript=0bp_to_NM_001252479,NM_133978_5end | |||
|description=CAGE_peak_2_at_Cmtm7_5end | |||
|id=chr9:114691104..114691116,- | |||
|ontology_enrichment_celltype=CL:0000988!1.53e-09!32;CL:0002032!1.53e-09!32;CL:0000037!1.53e-09!32;CL:0000566!1.53e-09!32;CL:0000837!1.53e-09!32;CL:0002320!1.00e-08!46;CL:0000134!1.00e-08!46;CL:0000219!2.25e-07!54;CL:0000063!3.24e-07!66;CL:0000738!9.82e-07!17;CL:0002087!9.82e-07!17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,5.59e-10,32;CL:0002032,5.59e-10,32;CL:0000037,5.59e-10,32;CL:0000837,5.59e-10,32;CL:0002320,1.29e-09,46;CL:0000134,1.29e-09,46;CL:0000219,3.41e-08,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.81e-19!48;UBERON:0002390!9.10e-19!45;UBERON:0003061!9.10e-19!45;UBERON:0000926!1.45e-14!193;UBERON:0004120!1.45e-14!193;UBERON:0006603!1.45e-14!193;UBERON:0003081!2.88e-14!88;UBERON:0002405!2.18e-13!70;UBERON:0002204!1.78e-10!32;UBERON:0004177!3.17e-10!29;UBERON:0002371!1.39e-09!16;UBERON:0001474!1.55e-09!22;UBERON:0004765!1.55e-09!22;UBERON:0001434!1.55e-09!22;UBERON:0002384!1.00e-08!46;UBERON:0003104!1.50e-08!131;UBERON:0009142!1.50e-08!131;UBERON:0000072!6.04e-08!27;UBERON:0003408!6.63e-08!24;UBERON:0002370!1.28e-07!23;UBERON:0000974!1.28e-07!23;UBERON:0004807!1.28e-07!23;UBERON:0005058!1.28e-07!23;UBERON:0003351!1.28e-07!23;UBERON:0009113!1.28e-07!23;UBERON:0003295!1.28e-07!23;UBERON:0009722!1.28e-07!23;UBERON:0005562!1.28e-07!23;UBERON:0007690!1.28e-07!23;UBERON:0001004!3.57e-07!42;UBERON:0006562!6.06e-07!24;UBERON:0001557!6.06e-07!24;UBERON:0001042!6.06e-07!24;UBERON:0008814!6.06e-07!24;UBERON:0009145!6.06e-07!24;UBERON:0000065!6.64e-07!41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.58e-19,48;UBERON:0002405,1.58e-19,48;UBERON:0002390,8.12e-19,45;UBERON:0003061,8.12e-19,45;UBERON:0000926,1.23e-14,120;UBERON:0004120,1.23e-14,120;UBERON:0006603,1.23e-14,120;UBERON:0003081,2.18e-13,87;UBERON:0002204,1.79e-10,32;UBERON:0004177,3.51e-10,29;UBERON:0005057,3.51e-10,29;UBERON:0000077,5.80e-10,35;UBERON:0002371,1.08e-09,16;UBERON:0001474,1.20e-09,22;UBERON:0004765,1.20e-09,22;UBERON:0001434,1.20e-09,22;UBERON:0002384,1.29e-09,46;UBERON:0003408,7.72e-08,24;UBERON:0000072,1.03e-07,27;UBERON:0002370,1.50e-07,23;UBERON:0000974,1.50e-07,23;UBERON:0004807,1.50e-07,23;UBERON:0005058,1.50e-07,23;UBERON:0003351,1.50e-07,23;UBERON:0009113,1.50e-07,23;UBERON:0003295,1.50e-07,23;UBERON:0009722,1.50e-07,23;UBERON:0005562,1.50e-07,23;UBERON:0007690,1.50e-07,23;UBERON:0001004,5.28e-07,42;UBERON:0000065,9.82e-07,41 | |||
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| |||
|short_description=p2@Cmtm7 | |||
}} |
Revision as of 17:05, 14 September 2013
Short description: | p2@Cmtm7 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Cmtm7_5end |
Coexpression cluster: | MCL_coexpression_mm9:115 |
Association with transcript: | 0bp_to_NM_001252479, NM_133978_5end |
EntrezGene: | Cmtm7 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 5.59e-10 | 32 |
hematopoietic oligopotent progenitor cell | 5.59e-10 | 32 |
hematopoietic stem cell | 5.59e-10 | 32 |
hematopoietic multipotent progenitor cell | 5.59e-10 | 32 |
connective tissue cell | 1.29e-09 | 46 |
mesenchymal cell | 1.29e-09 | 46 |
motile cell | 3.41e-08 | 54 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.58e-19 | 48 |
immune system | 1.58e-19 | 48 |
hematopoietic system | 8.12e-19 | 45 |
blood island | 8.12e-19 | 45 |
mesoderm | 1.23e-14 | 120 |
mesoderm-derived structure | 1.23e-14 | 120 |
presumptive mesoderm | 1.23e-14 | 120 |
lateral plate mesoderm | 2.18e-13 | 87 |
musculoskeletal system | 1.79e-10 | 32 |
hemopoietic organ | 3.51e-10 | 29 |
immune organ | 3.51e-10 | 29 |
mixed endoderm/mesoderm-derived structure | 5.80e-10 | 35 |
bone marrow | 1.08e-09 | 16 |
bone element | 1.20e-09 | 22 |
skeletal element | 1.20e-09 | 22 |
skeletal system | 1.20e-09 | 22 |
connective tissue | 1.29e-09 | 46 |
gland of gut | 7.72e-08 | 24 |
segment of respiratory tract | 1.03e-07 | 27 |
thymus | 1.50e-07 | 23 |
neck | 1.50e-07 | 23 |
respiratory system epithelium | 1.50e-07 | 23 |
hemolymphoid system gland | 1.50e-07 | 23 |
pharyngeal epithelium | 1.50e-07 | 23 |
thymic region | 1.50e-07 | 23 |
pharyngeal gland | 1.50e-07 | 23 |
entire pharyngeal arch endoderm | 1.50e-07 | 23 |
thymus primordium | 1.50e-07 | 23 |
early pharyngeal endoderm | 1.50e-07 | 23 |
respiratory system | 5.28e-07 | 42 |
respiratory tract | 9.82e-07 | 41 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.