FFCP PHASE1:Hg19::chr10:81046025..81046036,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C677|description=CAGE_peak_at_chr10:81046025..81046036,-|id=chr10:81046025..81046036,-|ontology_enrichment_celltype=CL:0002057!3.65e-86!42;CL:0000860!7.44e-80!45;CL:0000766!4.57e-70!76;CL:0000738!5.08e-64!140;CL:0000557!5.40e-60!71;CL:0002009!7.32e-59!65;CL:0000839!5.90e-54!70;CL:0002194!1.24e-53!63;CL:0000576!1.24e-53!63;CL:0000040!1.24e-53!63;CL:0000559!1.24e-53!63;CL:0000037!2.62e-52!172;CL:0000566!2.62e-52!172;CL:0000763!9.38e-50!112;CL:0000049!9.38e-50!112;CL:0000988!7.67e-49!182;CL:0002031!1.34e-45!124;CL:0002087!1.51e-45!119;CL:0002032!8.60e-44!165;CL:0000837!8.60e-44!165;CL:0000134!2.33e-19!358;CL:0002320!9.06e-19!365;CL:0000219!1.22e-17!390;CL:0000094!2.10e-16!8;CL:0000034!2.56e-14!444;CL:0000048!3.33e-14!430;CL:0000723!7.52e-14!436;CL:0000767!3.17e-12!3;CL:0000081!9.78e-12!11;CL:0000842!1.53e-11!3;CL:0002393!8.81e-10!9;CL:0002397!8.81e-10!9;CL:0000224!9.22e-09!4;CL:0001014!3.23e-08!2;CL:0001016!3.23e-08!2;CL:0002371!1.04e-07!591;CL:0000063!1.40e-07!578;CL:0000144!2.53e-07!625|ontology_enrichment_celltype_v019=CL:0000860;1.35e-35;33!CL:0002057;1.35e-35;33!CL:0000473;1.09e-26;39!CL:0000234;1.09e-26;39!CL:0000767;8.74e-18;3!CL:0000576;1.29e-17;48!CL:0000094;1.06e-14;8!CL:0000766;4.74e-14;69!CL:0000081;7.46e-11;11!CL:0001014;1.70e-07;2!CL:0000771;1.70e-07;2!CL:0001016;1.70e-07;2|ontology_enrichment_celltype_v019_2=CL:0000860,1.60e-34,42;CL:0002057,1.60e-34,42;CL:0000766,1.05e-31,72;CL:0000473,4.65e-30,48;CL:0000234,4.65e-30,48;CL:0002009,1.82e-27,61;CL:0000557,6.38e-25,67;CL:0000763,5.66e-24,108;CL:0000049,5.66e-24,108;CL:0002194,8.43e-24,59;CL:0000576,8.43e-24,59;CL:0000040,8.43e-24,59;CL:0000559,8.43e-24,59;CL:0000839,3.50e-21,66;CL:0000738,9.84e-19,136;CL:0000767,1.39e-17,3;CL:0002032,1.41e-15,161;CL:0000837,1.41e-15,161;CL:0000037,7.38e-15,168;CL:0000094,1.61e-14,8;CL:0000988,5.11e-14,177;CL:0002031,2.28e-13,120;CL:0002087,1.15e-11,115;CL:0000081,1.01e-10,11;CL:0001014,1.45e-07,2;CL:0001016,1.45e-07,2;CL:0000771,2.12e-07,2|ontology_enrichment_development_v019=CL:0002057;2.63e-26;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!2.21e-55!80;UBERON:0001474!6.47e-51!86;UBERON:0002390!1.82e-49!102;UBERON:0003061!1.82e-49!102;UBERON:0002193!3.23e-44!112;UBERON:0004765!4.73e-42!101;UBERON:0001434!4.73e-42!101;UBERON:0002405!7.56e-36!115;UBERON:0002204!7.00e-22!167;UBERON:0003081!2.46e-18!216;UBERON:0002384!5.77e-18!375|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.60e-22,76;UBERON:0001474,3.65e-20,82;UBERON:0004765,2.90e-18,90;UBERON:0002405,1.23e-17,93;UBERON:0002390,1.14e-16,98;UBERON:0003061,1.14e-16,98;UBERON:0001434,2.60e-16,100;UBERON:0002193,5.26e-15,108;UBERON:0002204,3.42e-09,167;UBERON:0003081,2.77e-07,203|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,1.15148819429164,4.02521920621798,0,0,0,0,0,0.293600439334847,0.553995408531877,1.40381113229099,0.868043482863407,0,0,0,0.581592955118259,0.755751887377619,0.242584061187816,0,2.05583944010913,2.78735733805593,1.43846196161075,1.5369642391746,1.6553756092201,0.344745680736619,2.5819387343353,1.35426486594342,0.564727018627814,0.545812300115692,0.449446968890169,0.306083892370903,0.641858054152187,1.27867425159808,0.329851300186716,0.997318288108159,0,0.290209238628584,0.56738522469114,0.622822248995575,1.7587406567972,0.521482918420201,1.73751075764093,0,0,0.316462387440884,0.422510572623884,0.212604299965044,0,0.22465726229299,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,1.32171328579026,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829312462163088,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0.385029108839245,0,0,0,0,0,0.749007023947182,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.82707210449155,0.647142602455851,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C677 | |||
|description=CAGE_peak_at_chr10:81046025..81046036,- | |||
|id=chr10:81046025..81046036,- | |||
|ontology_enrichment_celltype=CL:0002057!3.65e-86!42;CL:0000860!7.44e-80!45;CL:0000766!4.57e-70!76;CL:0000738!5.08e-64!140;CL:0000557!5.40e-60!71;CL:0002009!7.32e-59!65;CL:0000839!5.90e-54!70;CL:0002194!1.24e-53!63;CL:0000576!1.24e-53!63;CL:0000040!1.24e-53!63;CL:0000559!1.24e-53!63;CL:0000037!2.62e-52!172;CL:0000566!2.62e-52!172;CL:0000763!9.38e-50!112;CL:0000049!9.38e-50!112;CL:0000988!7.67e-49!182;CL:0002031!1.34e-45!124;CL:0002087!1.51e-45!119;CL:0002032!8.60e-44!165;CL:0000837!8.60e-44!165;CL:0000134!2.33e-19!358;CL:0002320!9.06e-19!365;CL:0000219!1.22e-17!390;CL:0000094!2.10e-16!8;CL:0000034!2.56e-14!444;CL:0000048!3.33e-14!430;CL:0000723!7.52e-14!436;CL:0000767!3.17e-12!3;CL:0000081!9.78e-12!11;CL:0000842!1.53e-11!3;CL:0002393!8.81e-10!9;CL:0002397!8.81e-10!9;CL:0000224!9.22e-09!4;CL:0001014!3.23e-08!2;CL:0001016!3.23e-08!2;CL:0002371!1.04e-07!591;CL:0000063!1.40e-07!578;CL:0000144!2.53e-07!625 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.35e-35;33!CL:0002057;1.35e-35;33!CL:0000473;1.09e-26;39!CL:0000234;1.09e-26;39!CL:0000767;8.74e-18;3!CL:0000576;1.29e-17;48!CL:0000094;1.06e-14;8!CL:0000766;4.74e-14;69!CL:0000081;7.46e-11;11!CL:0001014;1.70e-07;2!CL:0000771;1.70e-07;2!CL:0001016;1.70e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.60e-34,42;CL:0002057,1.60e-34,42;CL:0000766,1.05e-31,72;CL:0000473,4.65e-30,48;CL:0000234,4.65e-30,48;CL:0002009,1.82e-27,61;CL:0000557,6.38e-25,67;CL:0000763,5.66e-24,108;CL:0000049,5.66e-24,108;CL:0002194,8.43e-24,59;CL:0000576,8.43e-24,59;CL:0000040,8.43e-24,59;CL:0000559,8.43e-24,59;CL:0000839,3.50e-21,66;CL:0000738,9.84e-19,136;CL:0000767,1.39e-17,3;CL:0002032,1.41e-15,161;CL:0000837,1.41e-15,161;CL:0000037,7.38e-15,168;CL:0000094,1.61e-14,8;CL:0000988,5.11e-14,177;CL:0002031,2.28e-13,120;CL:0002087,1.15e-11,115;CL:0000081,1.01e-10,11;CL:0001014,1.45e-07,2;CL:0001016,1.45e-07,2;CL:0000771,2.12e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002057;2.63e-26;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.21e-55!80;UBERON:0001474!6.47e-51!86;UBERON:0002390!1.82e-49!102;UBERON:0003061!1.82e-49!102;UBERON:0002193!3.23e-44!112;UBERON:0004765!4.73e-42!101;UBERON:0001434!4.73e-42!101;UBERON:0002405!7.56e-36!115;UBERON:0002204!7.00e-22!167;UBERON:0003081!2.46e-18!216;UBERON:0002384!5.77e-18!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.60e-22,76;UBERON:0001474,3.65e-20,82;UBERON:0004765,2.90e-18,90;UBERON:0002405,1.23e-17,93;UBERON:0002390,1.14e-16,98;UBERON:0003061,1.14e-16,98;UBERON:0001434,2.60e-16,100;UBERON:0002193,5.26e-15,108;UBERON:0002204,3.42e-09,167;UBERON:0003081,2.77e-07,203 | |||
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|short_description=p@chr10:81046025..81046036,- | |||
}} |
Revision as of 14:34, 10 September 2013
Short description: | p@chr10:81046025..81046036, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:81046025..81046036, - |
Coexpression cluster: | C677_Basophils_CD14_Eosinophils_Neutrophils_CD34_Peripheral_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.60e-34 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.60e-34 | 42 |
myeloid leukocyte | 1.05e-31 | 72 |
defensive cell | 4.65e-30 | 48 |
phagocyte | 4.65e-30 | 48 |
macrophage dendritic cell progenitor | 1.82e-27 | 61 |
granulocyte monocyte progenitor cell | 6.38e-25 | 67 |
myeloid cell | 5.66e-24 | 108 |
common myeloid progenitor | 5.66e-24 | 108 |
monopoietic cell | 8.43e-24 | 59 |
monocyte | 8.43e-24 | 59 |
monoblast | 8.43e-24 | 59 |
promonocyte | 8.43e-24 | 59 |
myeloid lineage restricted progenitor cell | 3.50e-21 | 66 |
leukocyte | 9.84e-19 | 136 |
basophil | 1.39e-17 | 3 |
hematopoietic oligopotent progenitor cell | 1.41e-15 | 161 |
hematopoietic multipotent progenitor cell | 1.41e-15 | 161 |
hematopoietic stem cell | 7.38e-15 | 168 |
granulocyte | 1.61e-14 | 8 |
hematopoietic cell | 5.11e-14 | 177 |
hematopoietic lineage restricted progenitor cell | 2.28e-13 | 120 |
nongranular leukocyte | 1.15e-11 | 115 |
blood cell | 1.01e-10 | 11 |
CD1a-positive Langerhans cell | 1.45e-07 | 2 |
immature CD1a-positive Langerhans cell | 1.45e-07 | 2 |
eosinophil | 2.12e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.60e-22 | 76 |
bone element | 3.65e-20 | 82 |
skeletal element | 2.90e-18 | 90 |
immune system | 1.23e-17 | 93 |
hematopoietic system | 1.14e-16 | 98 |
blood island | 1.14e-16 | 98 |
skeletal system | 2.60e-16 | 100 |
hemolymphoid system | 5.26e-15 | 108 |
musculoskeletal system | 3.42e-09 | 167 |
lateral plate mesoderm | 2.77e-07 | 203 |
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