FFCP PHASE1:Hg19::chr11:69466307..69466329,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C807|description=CAGE_peak_at_chr11:69466307..69466329,+|id=chr11:69466307..69466329,+|ontology_enrichment_celltype=CL:0000055!1.12e-20!180;CL:0000220!1.88e-16!246;CL:0002321!2.32e-16!248;CL:0000057!1.24e-12!75;CL:0000192!1.90e-12!42;CL:0000514!1.90e-12!42;CL:0000548!7.28e-12!679;CL:0000004!7.28e-12!679;CL:0000255!7.28e-12!679;CL:0000066!2.74e-11!254;CL:0000012!2.88e-11!682;CL:0000359!3.07e-11!32;CL:0000680!5.22e-10!57;CL:0000056!5.22e-10!57;CL:0000355!5.22e-10!57;CL:0000222!8.37e-10!119;CL:0000183!1.94e-09!59;CL:0000144!3.35e-09!625;CL:0000187!8.99e-09!54;CL:0000393!2.07e-07!60;CL:0000211!2.07e-07!60;CL:0002371!7.34e-07!591;CL:0000075!8.57e-07!27|ontology_enrichment_celltype_v019=CL:0000359;1.91e-11;32!CL:0002334;1.46e-08;12!CL:0000192;5.24e-08;43!CL:0002595;1.02e-07;5|ontology_enrichment_celltype_v019_2=CL:0000359,7.77e-12,32;CL:0000192,2.68e-10,43;CL:0000514,2.68e-10,43;CL:0002334,1.06e-08,12;CL:0000680,2.20e-08,58;CL:0000056,2.20e-08,58;CL:0000355,2.20e-08,58;CL:0000057,3.65e-08,76;CL:0002595,9.49e-08,5;CL:0002539,8.47e-07,10|ontology_enrichment_development_v019=CL:0000514;5.24e-08;43|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:2394;6.71e-10;14!DOID:120;8.14e-07;27|ontology_enrichment_disease_v019_2=DOID:2394,4.20e-10,14;DOID:120,6.46e-07,27|ontology_enrichment_uberon=UBERON:0005256!8.69e-13!143;UBERON:0001637!1.01e-12!42;UBERON:0003509!1.01e-12!42;UBERON:0004572!1.01e-12!42;UBERON:0002100!2.32e-11!216;UBERON:0000914!3.43e-11!83;UBERON:0002329!3.43e-11!83;UBERON:0003077!3.43e-11!83;UBERON:0003059!3.43e-11!83;UBERON:0007282!3.43e-11!83;UBERON:0009618!3.43e-11!83;UBERON:0007285!3.43e-11!83;UBERON:0000055!1.53e-10!69;UBERON:0004573!2.25e-10!33;UBERON:0004571!2.25e-10!33;UBERON:0000486!3.99e-10!82;UBERON:0003914!4.43e-10!118;UBERON:0000475!4.74e-10!365;UBERON:0000468!5.97e-10!659;UBERON:0003102!1.18e-09!95;UBERON:0002049!1.28e-09!79;UBERON:0007798!1.28e-09!79;UBERON:0004290!1.60e-09!70;UBERON:0000490!2.89e-09!138;UBERON:0001981!2.97e-09!60;UBERON:0007500!2.97e-09!60;UBERON:0004537!2.97e-09!60;UBERON:0006965!2.97e-09!60;UBERON:0001134!8.10e-09!61;UBERON:0002036!8.10e-09!61;UBERON:0003082!8.10e-09!61;UBERON:0002385!5.61e-08!63;UBERON:0001015!5.61e-08!63;UBERON:0000383!5.61e-08!63;UBERON:0004872!1.48e-07!84;UBERON:0002199!1.51e-07!45;UBERON:0002416!1.51e-07!45;UBERON:0000119!1.90e-07!312;UBERON:0000483!3.73e-07!309|ontology_enrichment_uberon_v019=UBERON:0004573;1.55e-08;33!UBERON:0004571;1.55e-08;33!UBERON:0003834;1.02e-07;5!UBERON:0001533;1.02e-07;5!UBERON:0003513;2.33e-07;7!UBERON:0002118;6.93e-07;5!UBERON:0001637;9.98e-07;42!UBERON:0003509;9.98e-07;42!UBERON:0004572;9.98e-07;42|ontology_enrichment_uberon_v019_2=UBERON:0001637,1.77e-10,42;UBERON:0003509,1.77e-10,42;UBERON:0004572,1.77e-10,42;UBERON:0004573,2.13e-09,33;UBERON:0004571,2.13e-09,33;UBERON:0007524,1.01e-08,73;UBERON:0002329,2.32e-08,71;UBERON:0003059,2.32e-08,71;UBERON:0007282,2.32e-08,71;UBERON:0004290,2.32e-08,71;UBERON:0009618,2.32e-08,71;UBERON:0007503,3.90e-08,78;UBERON:0003077,3.91e-08,72;UBERON:0007285,3.91e-08,72;UBERON:0000055,5.30e-08,68;UBERON:0003834,9.49e-08,5;UBERON:0001533,9.49e-08,5;UBERON:0003513,1.96e-07,7;UBERON:0001134,2.12e-07,62;UBERON:0002036,2.12e-07,62;UBERON:0003082,2.12e-07,62;UBERON:0002118,4.79e-07,5;UBERON:0002385,5.84e-07,64;UBERON:0001015,5.84e-07,64;UBERON:0000383,5.84e-07,64;UBERON:0004237,8.47e-07,10;UBERON:0004695,8.47e-07,10;UBERON:0002111,8.47e-07,10;UBERON:0004178,8.47e-07,10|phase1_expression=0.726713517082227,2.35510576280081,0,4.00293193412522,0,0.872338524100369,2.53299878168311,1.26343974685366,0.261185628199839,0.982935746006035,0.697801167972428,0.873765488520689,1.84636884759917,0.495065411840187,1.65698687863958,6.05092631806598,3.61616716814386,3.65155045193687,5.85519358548608,0.246242116153576,0.612002073732759,0.313454721478088,0.286235987131057,0.410623275218653,0.376627918784408,0.0764134057479513,0,0.0787107813136792,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,1.01392563272577,0,1.94653948121054,0.283604451492204,1.55210578223795,0.351339142772504,0.130979075497713,0.364295288292542,0.370784442784429,0,0,0.132957960518865,0,0,0,0.198762407366705,0,0.694281003215189,0.56530794192401,0,0.825354125820202,0.835979866147242,1.29208379584664,0.71153252537342,0,0,0,0.732186172644509,0.367663080345869,0.81014194788176,0.446498641420399,0.44905874525234,0.112611480483322,0,0.949265659568129,0.366403487860815,0,0,0,0,1.2663051166458,1.58891016975863,0.860509862246441,1.41867352879343,0.560677600142307,1.06748995729705,1.97334038733728,0,0.404132016209064,0.326923806226917,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C807 | |||
|description=CAGE_peak_at_chr11:69466307..69466329,+ | |||
|id=chr11:69466307..69466329,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.12e-20!180;CL:0000220!1.88e-16!246;CL:0002321!2.32e-16!248;CL:0000057!1.24e-12!75;CL:0000192!1.90e-12!42;CL:0000514!1.90e-12!42;CL:0000548!7.28e-12!679;CL:0000004!7.28e-12!679;CL:0000255!7.28e-12!679;CL:0000066!2.74e-11!254;CL:0000012!2.88e-11!682;CL:0000359!3.07e-11!32;CL:0000680!5.22e-10!57;CL:0000056!5.22e-10!57;CL:0000355!5.22e-10!57;CL:0000222!8.37e-10!119;CL:0000183!1.94e-09!59;CL:0000144!3.35e-09!625;CL:0000187!8.99e-09!54;CL:0000393!2.07e-07!60;CL:0000211!2.07e-07!60;CL:0002371!7.34e-07!591;CL:0000075!8.57e-07!27 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.91e-11;32!CL:0002334;1.46e-08;12!CL:0000192;5.24e-08;43!CL:0002595;1.02e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,7.77e-12,32;CL:0000192,2.68e-10,43;CL:0000514,2.68e-10,43;CL:0002334,1.06e-08,12;CL:0000680,2.20e-08,58;CL:0000056,2.20e-08,58;CL:0000355,2.20e-08,58;CL:0000057,3.65e-08,76;CL:0002595,9.49e-08,5;CL:0002539,8.47e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000514;5.24e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;6.71e-10;14!DOID:120;8.14e-07;27 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,4.20e-10,14;DOID:120,6.46e-07,27 | |||
|ontology_enrichment_uberon=UBERON:0005256!8.69e-13!143;UBERON:0001637!1.01e-12!42;UBERON:0003509!1.01e-12!42;UBERON:0004572!1.01e-12!42;UBERON:0002100!2.32e-11!216;UBERON:0000914!3.43e-11!83;UBERON:0002329!3.43e-11!83;UBERON:0003077!3.43e-11!83;UBERON:0003059!3.43e-11!83;UBERON:0007282!3.43e-11!83;UBERON:0009618!3.43e-11!83;UBERON:0007285!3.43e-11!83;UBERON:0000055!1.53e-10!69;UBERON:0004573!2.25e-10!33;UBERON:0004571!2.25e-10!33;UBERON:0000486!3.99e-10!82;UBERON:0003914!4.43e-10!118;UBERON:0000475!4.74e-10!365;UBERON:0000468!5.97e-10!659;UBERON:0003102!1.18e-09!95;UBERON:0002049!1.28e-09!79;UBERON:0007798!1.28e-09!79;UBERON:0004290!1.60e-09!70;UBERON:0000490!2.89e-09!138;UBERON:0001981!2.97e-09!60;UBERON:0007500!2.97e-09!60;UBERON:0004537!2.97e-09!60;UBERON:0006965!2.97e-09!60;UBERON:0001134!8.10e-09!61;UBERON:0002036!8.10e-09!61;UBERON:0003082!8.10e-09!61;UBERON:0002385!5.61e-08!63;UBERON:0001015!5.61e-08!63;UBERON:0000383!5.61e-08!63;UBERON:0004872!1.48e-07!84;UBERON:0002199!1.51e-07!45;UBERON:0002416!1.51e-07!45;UBERON:0000119!1.90e-07!312;UBERON:0000483!3.73e-07!309 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.55e-08;33!UBERON:0004571;1.55e-08;33!UBERON:0003834;1.02e-07;5!UBERON:0001533;1.02e-07;5!UBERON:0003513;2.33e-07;7!UBERON:0002118;6.93e-07;5!UBERON:0001637;9.98e-07;42!UBERON:0003509;9.98e-07;42!UBERON:0004572;9.98e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,1.77e-10,42;UBERON:0003509,1.77e-10,42;UBERON:0004572,1.77e-10,42;UBERON:0004573,2.13e-09,33;UBERON:0004571,2.13e-09,33;UBERON:0007524,1.01e-08,73;UBERON:0002329,2.32e-08,71;UBERON:0003059,2.32e-08,71;UBERON:0007282,2.32e-08,71;UBERON:0004290,2.32e-08,71;UBERON:0009618,2.32e-08,71;UBERON:0007503,3.90e-08,78;UBERON:0003077,3.91e-08,72;UBERON:0007285,3.91e-08,72;UBERON:0000055,5.30e-08,68;UBERON:0003834,9.49e-08,5;UBERON:0001533,9.49e-08,5;UBERON:0003513,1.96e-07,7;UBERON:0001134,2.12e-07,62;UBERON:0002036,2.12e-07,62;UBERON:0003082,2.12e-07,62;UBERON:0002118,4.79e-07,5;UBERON:0002385,5.84e-07,64;UBERON:0001015,5.84e-07,64;UBERON:0000383,5.84e-07,64;UBERON:0004237,8.47e-07,10;UBERON:0004695,8.47e-07,10;UBERON:0002111,8.47e-07,10;UBERON:0004178,8.47e-07,10 | |||
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| |||
|short_description=p@chr11:69466307..69466329,+ | |||
}} |
Revision as of 19:23, 10 September 2013
Short description: | p@chr11:69466307..69466329, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:69466307..69466329, + |
Coexpression cluster: | C807_neuroectodermal_renal_leiomyoma_Smooth_neuroblastoma_Aortic_Melanocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 7.77e-12 | 32 |
smooth muscle cell | 2.68e-10 | 43 |
smooth muscle myoblast | 2.68e-10 | 43 |
preadipocyte | 1.06e-08 | 12 |
muscle precursor cell | 2.20e-08 | 58 |
myoblast | 2.20e-08 | 58 |
multi-potent skeletal muscle stem cell | 2.20e-08 | 58 |
fibroblast | 3.65e-08 | 76 |
smooth muscle cell of the subclavian artery | 9.49e-08 | 5 |
aortic smooth muscle cell | 8.47e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
artery | 1.77e-10 | 42 |
arterial blood vessel | 1.77e-10 | 42 |
arterial system | 1.77e-10 | 42 |
systemic artery | 2.13e-09 | 33 |
systemic arterial system | 2.13e-09 | 33 |
dense mesenchyme tissue | 1.01e-08 | 73 |
somite | 2.32e-08 | 71 |
presomitic mesoderm | 2.32e-08 | 71 |
presumptive segmental plate | 2.32e-08 | 71 |
dermomyotome | 2.32e-08 | 71 |
trunk paraxial mesoderm | 2.32e-08 | 71 |
epithelial vesicle | 3.90e-08 | 78 |
paraxial mesoderm | 3.91e-08 | 72 |
presumptive paraxial mesoderm | 3.91e-08 | 72 |
vessel | 5.30e-08 | 68 |
thoracic segment blood vessel | 9.49e-08 | 5 |
subclavian artery | 9.49e-08 | 5 |
trunk blood vessel | 1.96e-07 | 7 |
skeletal muscle tissue | 2.12e-07 | 62 |
striated muscle tissue | 2.12e-07 | 62 |
myotome | 2.12e-07 | 62 |
right ovary | 4.79e-07 | 5 |
muscle tissue | 5.84e-07 | 64 |
musculature | 5.84e-07 | 64 |
musculature of body | 5.84e-07 | 64 |
blood vessel smooth muscle | 8.47e-07 | 10 |
arterial system smooth muscle | 8.47e-07 | 10 |
artery smooth muscle tissue | 8.47e-07 | 10 |
aorta smooth muscle tissue | 8.47e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 4.20e-10 | 14 |
female reproductive organ cancer | 6.46e-07 | 27 |
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