FFCP PHASE1:Hg19::chr12:15942639..15942659,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2059|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=3420|TSSclassifier=W|UniProt=Q12929,F5H819,B4E3T6|association_with_transcript=-129bp_to_ENST00000281172,ENST00000543223,NM_004447,uc001rdb.2,uc009zig.2_5end|description=CAGE_peak_7_at_EPS8_5end|id=chr12:15942639..15942659,-|ontology_enrichment_celltype=CL:0000055!1.20e-11!180;CL:0000136!5.23e-10!15;CL:0000057!9.54e-08!75|ontology_enrichment_celltype_v019=CL:0000136;3.00e-17;13!CL:0000680;1.77e-10;7!CL:0000708;1.57e-07;3!CL:0002590;1.79e-07;3!CL:0002564;1.95e-07;3!CL:0002615;3.38e-07;3!CL:0000594;3.38e-07;3!CL:0000515;7.98e-07;3|ontology_enrichment_celltype_v019_2=CL:0000136,4.56e-15,15;CL:0002590,1.54e-07,3;CL:0000708,1.58e-07,3;CL:0000594,2.87e-07,3;CL:0002564,3.39e-07,3;CL:0002615,6.32e-07,3;CL:0000680,9.09e-07,58;CL:0000056,9.09e-07,58;CL:0000355,9.09e-07,58|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000475!9.55e-11!365;UBERON:0000481!2.25e-09!347;UBERON:0002100!2.85e-08!216;UBERON:0005256!1.55e-07!143;UBERON:0000468!4.83e-07!659|ontology_enrichment_uberon_v019=UBERON:0005284;7.51e-12;5!UBERON:0001134;8.14e-09;16!UBERON:0002036;8.14e-09;16!UBERON:0003688;1.36e-08;6!UBERON:0002358;1.36e-08;6!UBERON:0003684;1.36e-08;6!UBERON:0001178;1.36e-08;6!UBERON:0003210;1.57e-07;3!UBERON:0002242;1.95e-07;3!UBERON:0011135;3.33e-07;5!UBERON:0002216;3.33e-07;5!UBERON:0011134;3.33e-07;5!UBERON:0002209;3.33e-07;5!UBERON:0002213;3.33e-07;5!UBERON:0007844;3.33e-07;5!UBERON:0011138;3.33e-07;5!UBERON:0001130;3.33e-07;5!UBERON:0001066;3.33e-07;5!UBERON:0001468;3.33e-07;5!UBERON:0006876;6.83e-07;11|ontology_enrichment_uberon_v019_2=UBERON:0005284,6.65e-12,5;UBERON:0003104,1.30e-08,160;UBERON:0009142,1.30e-08,160;UBERON:0002385,1.96e-08,64;UBERON:0001015,1.96e-08,64;UBERON:0000383,1.96e-08,64;UBERON:0003688,2.25e-08,6;UBERON:0002358,2.25e-08,6;UBERON:0003684,2.25e-08,6;UBERON:0001178,2.25e-08,6;UBERON:0002329,8.21e-08,71;UBERON:0003059,8.21e-08,71;UBERON:0007282,8.21e-08,71;UBERON:0004290,8.21e-08,71;UBERON:0009618,8.21e-08,71;UBERON:0001134,8.58e-08,62;UBERON:0002036,8.58e-08,62;UBERON:0003082,8.58e-08,62;UBERON:0003077,1.24e-07,72;UBERON:0007285,1.24e-07,72;UBERON:0003210,1.58e-07,3;UBERON:0007524,1.86e-07,73;UBERON:0011135,2.95e-07,5;UBERON:0002216,2.95e-07,5;UBERON:0011134,2.95e-07,5;UBERON:0002209,2.95e-07,5;UBERON:0002213,2.95e-07,5;UBERON:0005856,2.95e-07,5;UBERON:0005866,2.95e-07,5;UBERON:0005863,2.95e-07,5;UBERON:0007844,2.95e-07,5;UBERON:0011138,2.95e-07,5;UBERON:0001130,2.95e-07,5;UBERON:0001066,2.95e-07,5;UBERON:0001468,2.95e-07,5;UBERON:0002242,3.39e-07,3;UBERON:0003068,3.39e-07,3;UBERON:0002328,3.39e-07,3;UBERON:0004880,3.39e-07,3;UBERON:0006876,4.81e-07,11;UBERON:0005256,6.32e-07,122|phase1_expression=7.08545679155171,1.92690471501885,2.96004248601539,1.0007329835313,2.68176656656373,1.74467704820074,2.53299878168311,0.631719873426831,1.56711376919903,0,0,0,0,1.8564952944007,0.994192127183747,0,0,0,0,0.246242116153576,1.02000345622126,0,0.286235987131057,0.136874425072884,1.00434111675842,0,0.164201178899891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0.232429036905685,0.411167888021826,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209658645508376,0,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,1.34140171940727,0.511450247374121,0.722878304769133,0.50133791063589,1.44846518960824,0,0.486634870302636,0.378139268656271,0,0.351339142772504,0.523916301990851,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0.25326102332916,0.132409180813219,1.14734648299525,0.354668382198357,0.560677600142307,0,0,4.35695449559673,0.942974704487816,1.79808093424805,12.1085942115945,21.89468513024,0.70296429550139,0.624320153660641,0.570471821544449,1.04614076386261,0.352303495931295,0.485618833104395,0.140450806702248,0.408308342509787,0,0.723280468230358,0,0.247266929278557,0.910161361938026,0,0,0.375355559615893,0.554128230968366,0,0,0.150238058906597,0.340296549480063,0.358779271377724,0.427114777637135,0.847727604638247,0.600182192168805,0.309157587715317,3.09168648054755,0.744467425326359,0.506328996723799,0.68205903612839,0,0.644349290496095,0.484938170456436,0.355009592516614,0.302256294682921,0.67824236924195,0,0.272746120590835,0,0,0,0,0,0,0,0,1.28648187638577,0,0.464367928031979,0,0,0,0,0.220587945464788,0,0.237270619111097,0.269662616320329,0,1.15424147083917,0,0,0,0,2.53510069643662,0,1.18157981336281,0,0.860919069801795,0.171567810298526,0,0,0,0,0,0,0,0,0.352226082707465,0,0,0.190254152234598,0,0,0.246217006087397,0.468008530278475,0.148631162288728,0.93733833986777,0,0,0.0895585227028483,0.290633938513962,0,0,0,0,0,0,0.317489471460845,0.381988425558278,0,1.71072446022705,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283404541,0.430018749454354,0,0.203974470572744,0,0,0.371995018166751,0.462175628631418,0.432626562123789,0,0,0,0.101988829741982,0.26721740526556,0,0,0.378893491091197,0,0,0.20686599172379,0.213233981900981,0.476128862927481,0,0,0,1.01835453245064,0,0.653150243690884,0,0.202056159043763,1.00411087549747,0.665320713092027,0.162806537221949,0.213454691755431,0,1.25755282949222,0,1.22241444182866,0.406896178315738,0.665756774185513,0.201273793591026,0|short_description=p7@EPS8}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=2059 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3420 | |||
|TSSclassifier=W | |||
|UniProt=Q12929,F5H819,B4E3T6 | |||
|association_with_transcript=-129bp_to_ENST00000281172,ENST00000543223,NM_004447,uc001rdb.2,uc009zig.2_5end | |||
|description=CAGE_peak_7_at_EPS8_5end | |||
|id=chr12:15942639..15942659,- | |||
|ontology_enrichment_celltype=CL:0000055!1.20e-11!180;CL:0000136!5.23e-10!15;CL:0000057!9.54e-08!75 | |||
|ontology_enrichment_celltype_v019=CL:0000136;3.00e-17;13!CL:0000680;1.77e-10;7!CL:0000708;1.57e-07;3!CL:0002590;1.79e-07;3!CL:0002564;1.95e-07;3!CL:0002615;3.38e-07;3!CL:0000594;3.38e-07;3!CL:0000515;7.98e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,4.56e-15,15;CL:0002590,1.54e-07,3;CL:0000708,1.58e-07,3;CL:0000594,2.87e-07,3;CL:0002564,3.39e-07,3;CL:0002615,6.32e-07,3;CL:0000680,9.09e-07,58;CL:0000056,9.09e-07,58;CL:0000355,9.09e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!9.55e-11!365;UBERON:0000481!2.25e-09!347;UBERON:0002100!2.85e-08!216;UBERON:0005256!1.55e-07!143;UBERON:0000468!4.83e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0005284;7.51e-12;5!UBERON:0001134;8.14e-09;16!UBERON:0002036;8.14e-09;16!UBERON:0003688;1.36e-08;6!UBERON:0002358;1.36e-08;6!UBERON:0003684;1.36e-08;6!UBERON:0001178;1.36e-08;6!UBERON:0003210;1.57e-07;3!UBERON:0002242;1.95e-07;3!UBERON:0011135;3.33e-07;5!UBERON:0002216;3.33e-07;5!UBERON:0011134;3.33e-07;5!UBERON:0002209;3.33e-07;5!UBERON:0002213;3.33e-07;5!UBERON:0007844;3.33e-07;5!UBERON:0011138;3.33e-07;5!UBERON:0001130;3.33e-07;5!UBERON:0001066;3.33e-07;5!UBERON:0001468;3.33e-07;5!UBERON:0006876;6.83e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005284,6.65e-12,5;UBERON:0003104,1.30e-08,160;UBERON:0009142,1.30e-08,160;UBERON:0002385,1.96e-08,64;UBERON:0001015,1.96e-08,64;UBERON:0000383,1.96e-08,64;UBERON:0003688,2.25e-08,6;UBERON:0002358,2.25e-08,6;UBERON:0003684,2.25e-08,6;UBERON:0001178,2.25e-08,6;UBERON:0002329,8.21e-08,71;UBERON:0003059,8.21e-08,71;UBERON:0007282,8.21e-08,71;UBERON:0004290,8.21e-08,71;UBERON:0009618,8.21e-08,71;UBERON:0001134,8.58e-08,62;UBERON:0002036,8.58e-08,62;UBERON:0003082,8.58e-08,62;UBERON:0003077,1.24e-07,72;UBERON:0007285,1.24e-07,72;UBERON:0003210,1.58e-07,3;UBERON:0007524,1.86e-07,73;UBERON:0011135,2.95e-07,5;UBERON:0002216,2.95e-07,5;UBERON:0011134,2.95e-07,5;UBERON:0002209,2.95e-07,5;UBERON:0002213,2.95e-07,5;UBERON:0005856,2.95e-07,5;UBERON:0005866,2.95e-07,5;UBERON:0005863,2.95e-07,5;UBERON:0007844,2.95e-07,5;UBERON:0011138,2.95e-07,5;UBERON:0001130,2.95e-07,5;UBERON:0001066,2.95e-07,5;UBERON:0001468,2.95e-07,5;UBERON:0002242,3.39e-07,3;UBERON:0003068,3.39e-07,3;UBERON:0002328,3.39e-07,3;UBERON:0004880,3.39e-07,3;UBERON:0006876,4.81e-07,11;UBERON:0005256,6.32e-07,122 | |||
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| |||
|short_description=p7@EPS8 | |||
}} |
Revision as of 21:58, 10 September 2013
Short description: | p7@EPS8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_EPS8_5end |
Coexpression cluster: | NA |
Association with transcript: | -129bp_to_ENST00000281172, ENST00000543223, NM_004447, uc001rdb.2, uc009zig.2_5end |
EntrezGene: | EPS8 |
HGNC: | 3420 |
UniProt: | Q12929F5H819B4E3T6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 4.56e-15 | 15 |
smooth muscle cell of the brain vasculature | 1.54e-07 | 3 |
leptomeningeal cell | 1.58e-07 | 3 |
skeletal muscle satellite cell | 2.87e-07 | 3 |
nucleus pulposus cell of intervertebral disc | 3.39e-07 | 3 |
adipocyte of omentum tissue | 6.32e-07 | 3 |
muscle precursor cell | 9.09e-07 | 58 |
myoblast | 9.09e-07 | 58 |
multi-potent skeletal muscle stem cell | 9.09e-07 | 58 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.