FFCP PHASE1:Hg19::chr12:72667278..72667297,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=283392|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000426250,NR_026836,NR_026837,uc010stv.1_5end|coexpression_cluster_id=C29|description=CAGE_peak_1_at_LOC283392_5end|id=chr12:72667278..72667297,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:1000507;1.06e-12;10!CL:1000494;1.06e-12;10!CL:1000449;8.86e-08;15|ontology_enrichment_celltype_v019_2=CL:1000507,1.23e-12,10;CL:1000494,1.23e-12,10;CL:1000449,9.70e-08,15|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:0060072;3.51e-08;4|ontology_enrichment_disease_v019_2=DOID:0060072,3.38e-08,4|ontology_enrichment_uberon=UBERON:0007023!1.21e-14!115;UBERON:0002346!2.20e-12!90;UBERON:0000475!6.64e-12!365;UBERON:0003075!5.55e-11!86;UBERON:0007284!5.55e-11!86;UBERON:0001869!9.31e-11!32;UBERON:0001049!2.57e-10!57;UBERON:0005068!2.57e-10!57;UBERON:0006241!2.57e-10!57;UBERON:0007135!2.57e-10!57;UBERON:0001893!2.86e-10!34;UBERON:0002020!3.36e-10!34;UBERON:0003528!3.36e-10!34;UBERON:0003056!5.69e-10!61;UBERON:0002791!8.31e-10!33;UBERON:0001950!1.81e-09!20;UBERON:0000924!3.53e-09!173;UBERON:0006601!3.53e-09!173;UBERON:0003080!4.78e-09!42;UBERON:0002619!6.41e-09!22;UBERON:0002616!6.70e-09!59;UBERON:0000073!1.44e-08!94;UBERON:0001016!1.44e-08!94;UBERON:0002780!2.09e-08!41;UBERON:0001890!2.09e-08!41;UBERON:0006240!2.09e-08!41;UBERON:0005743!2.27e-08!86;UBERON:0004121!3.73e-08!169;UBERON:0000033!3.94e-08!123;UBERON:0000955!4.86e-08!69;UBERON:0006238!4.86e-08!69;UBERON:0000481!5.09e-08!347;UBERON:0000956!7.11e-08!25;UBERON:0000203!7.11e-08!25;UBERON:0000153!9.90e-08!129;UBERON:0007811!9.90e-08!129;UBERON:0001017!1.85e-07!82;UBERON:0005156!6.60e-07!59;UBERON:0000990!6.60e-07!59;UBERON:0003064!7.60e-07!37|ontology_enrichment_uberon_v019=UBERON:0004211;1.06e-12;10!UBERON:0009773;1.06e-12;10!UBERON:0001231;1.06e-12;10!UBERON:0004810;1.06e-12;10!UBERON:0001950;6.98e-08;20!UBERON:0006555;8.86e-08;15!UBERON:0004819;8.86e-08;15!UBERON:0001285;8.86e-08;15!UBERON:0007684;8.86e-08;15!UBERON:0002619;5.73e-07;22|ontology_enrichment_uberon_v019_2=UBERON:0004810,1.23e-12,10;UBERON:0001950,8.23e-08,20;UBERON:0004211,9.70e-08,15;UBERON:0009773,9.70e-08,15;UBERON:0001231,9.70e-08,15;UBERON:0001285,9.70e-08,15;UBERON:0007684,9.70e-08,15;UBERON:0004208,9.70e-08,15;UBERON:0006555,3.91e-07,16;UBERON:0004819,3.91e-07,16;UBERON:0002619,6.62e-07,22|phase1_expression=0,0.428201047781966,0.986680828671798,0,4.02264984984559,0,5.06599756336621,0,0.522371256399677,0.245733936501509,0,0,0,0.866364470720326,0.331397375727916,0.672325146451775,0,0,0.487932798790507,0.123121058076788,0.408001382488506,0,0,0.273748850145768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0.397227542439656,0,0,0.560677600142307,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0.117434498643765,0,0.140450806702248,1.22492502752936,1.35117749042945,0.309977343527296,0,0,0,0,0.841680569770331,0.250237039743928,0.554128230968366,0,0,0,0,2.69084453533293,0,0,5.10154863343484,1.75189299705346,6.69865404118636,1.30281799432113,0,0.0974370051611986,1.26216887122057,0.736399189138395,1.13152239773168,3.55009592516614,1.61203357164224,4.0694542154517,0.773043412653187,0.545492241181669,0,0,0.132529768321485,0,0.207322110030741,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0.982827216677626,0,0,0,0.171567810298526,0.98775256867763,0,0,0.0925884451585296,0.651616610620649,1.03993478527958,1.44331342025273,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0.839910640994298,0.141775097242386,0.985143749731331,0.581267877027924,1.53353071666084,0,0,0,0,0,0,0,0,0,0.308482478109971,0,0,0,0,0,0.904902010304444,0,0,2.6593811658487,2.08014873822732,0.257207374262142,1.41849132023278,0.532844358032199,0,0.542621605391443,0.823240336780769,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,1.02738161275192,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,1.00034104211935,0.271265023699736,0.415941723061614,0.178428988797162,0.157702415033935,0.117141414992713,0,0,1.03473071292505,0,0.553107505625109,2.25897397617015,0,0.686286847621712,0,0,0,0.909382714338778,0,0.604780586659361,0,0.460385919864187,0,0,0,0,0,2.46735510084249,0,1.97105174433142,1.55776328755086,1.27831416305955,0,0,0,0.68888668898764,4.73437036817464,7.86746489756545,2.25599806453706,5.16002758599579,3.92174884588428,1.46139224653261,6.12199447578679,0,0,0.863663664408557,0,2.98041081298238,1.00337954770971,2.80363900349542,0,2.46262230194396,1.31555925987561,1.3071772551245,0.256450125116389,0.656029291399411,0.325378394664303,1.03041011647722,0,0,0,0,3.21367859688319,0.290012154876366,0.308097234229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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=283392 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000426250,NR_026836,NR_026837,uc010stv.1_5end | |||
|coexpression_cluster_id=C29 | |||
|description=CAGE_peak_1_at_LOC283392_5end | |||
|id=chr12:72667278..72667297,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:1000507;1.06e-12;10!CL:1000494;1.06e-12;10!CL:1000449;8.86e-08;15 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,1.23e-12,10;CL:1000494,1.23e-12,10;CL:1000449,9.70e-08,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060072;3.51e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060072,3.38e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.21e-14!115;UBERON:0002346!2.20e-12!90;UBERON:0000475!6.64e-12!365;UBERON:0003075!5.55e-11!86;UBERON:0007284!5.55e-11!86;UBERON:0001869!9.31e-11!32;UBERON:0001049!2.57e-10!57;UBERON:0005068!2.57e-10!57;UBERON:0006241!2.57e-10!57;UBERON:0007135!2.57e-10!57;UBERON:0001893!2.86e-10!34;UBERON:0002020!3.36e-10!34;UBERON:0003528!3.36e-10!34;UBERON:0003056!5.69e-10!61;UBERON:0002791!8.31e-10!33;UBERON:0001950!1.81e-09!20;UBERON:0000924!3.53e-09!173;UBERON:0006601!3.53e-09!173;UBERON:0003080!4.78e-09!42;UBERON:0002619!6.41e-09!22;UBERON:0002616!6.70e-09!59;UBERON:0000073!1.44e-08!94;UBERON:0001016!1.44e-08!94;UBERON:0002780!2.09e-08!41;UBERON:0001890!2.09e-08!41;UBERON:0006240!2.09e-08!41;UBERON:0005743!2.27e-08!86;UBERON:0004121!3.73e-08!169;UBERON:0000033!3.94e-08!123;UBERON:0000955!4.86e-08!69;UBERON:0006238!4.86e-08!69;UBERON:0000481!5.09e-08!347;UBERON:0000956!7.11e-08!25;UBERON:0000203!7.11e-08!25;UBERON:0000153!9.90e-08!129;UBERON:0007811!9.90e-08!129;UBERON:0001017!1.85e-07!82;UBERON:0005156!6.60e-07!59;UBERON:0000990!6.60e-07!59;UBERON:0003064!7.60e-07!37 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;1.06e-12;10!UBERON:0009773;1.06e-12;10!UBERON:0001231;1.06e-12;10!UBERON:0004810;1.06e-12;10!UBERON:0001950;6.98e-08;20!UBERON:0006555;8.86e-08;15!UBERON:0004819;8.86e-08;15!UBERON:0001285;8.86e-08;15!UBERON:0007684;8.86e-08;15!UBERON:0002619;5.73e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,1.23e-12,10;UBERON:0001950,8.23e-08,20;UBERON:0004211,9.70e-08,15;UBERON:0009773,9.70e-08,15;UBERON:0001231,9.70e-08,15;UBERON:0001285,9.70e-08,15;UBERON:0007684,9.70e-08,15;UBERON:0004208,9.70e-08,15;UBERON:0006555,3.91e-07,16;UBERON:0004819,3.91e-07,16;UBERON:0002619,6.62e-07,22 | |||
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| |||
|short_description=p1@LOC283392 | |||
}} |
Revision as of 00:24, 11 September 2013
Short description: | p1@LOC283392 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_LOC283392_5end |
Coexpression cluster: | C29_mature_adipose_Adipocyte_breast_Lymphatic_vein_heart |
Association with transcript: | 0bp_to_ENST00000426250, NR_026836, NR_026837, uc010stv.1_5end |
EntrezGene: | LOC283392 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 1.23e-12 | 10 |
nephron tubule epithelial cell | 1.23e-12 | 10 |
epithelial cell of nephron | 9.70e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
nephron tubule epithelium | 1.23e-12 | 10 |
neocortex | 8.23e-08 | 20 |
nephron epithelium | 9.70e-08 | 15 |
renal tubule | 9.70e-08 | 15 |
nephron tubule | 9.70e-08 | 15 |
nephron | 9.70e-08 | 15 |
uriniferous tubule | 9.70e-08 | 15 |
nephrogenic mesenchyme | 9.70e-08 | 15 |
excretory tube | 3.91e-07 | 16 |
kidney epithelium | 3.91e-07 | 16 |
regional part of cerebral cortex | 6.62e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
benign neoplasm | 3.38e-08 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.