FFCP PHASE1:Hg19::chr12:96793396..96793414,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:96793396..96793414,+|id=chr12:96793396..96793414,+|ontology_enrichment_celltype=CL:0000738!6.55e-24!140;CL:0000037!9.62e-22!172;CL:0000566!9.62e-22!172;CL:0000988!1.21e-20!182;CL:0002032!2.18e-18!165;CL:0000837!2.18e-18!165;CL:0002031!1.24e-16!124;CL:0000860!4.39e-16!45;CL:0000115!5.50e-16!35;CL:0002057!7.55e-16!42;CL:0002087!9.47e-16!119;CL:0000766!2.63e-15!76;CL:0002139!7.24e-15!24;CL:0000763!2.27e-13!112;CL:0000049!2.27e-13!112;CL:0000557!2.79e-13!71;CL:0000071!7.33e-13!18;CL:0002546!7.33e-13!18;CL:0000839!8.04e-12!70;CL:0002078!3.27e-10!44;CL:0002009!5.21e-10!65;CL:0002194!6.42e-10!63;CL:0000576!6.42e-10!63;CL:0000040!6.42e-10!63;CL:0000559!6.42e-10!63;CL:0000213!1.95e-09!57;CL:0000215!1.95e-09!57;CL:0000034!5.22e-09!444;CL:0000048!6.79e-09!430;CL:0000723!2.03e-08!436;CL:0000144!1.00e-07!625;CL:0002371!1.09e-07!591;CL:0000134!2.18e-07!358;CL:0000219!2.57e-07!390;CL:0002320!6.46e-07!365|ontology_enrichment_celltype_v019=CL:0000115;5.43e-25;36!CL:0002139;5.84e-22;24!CL:0000071;1.18e-21;18!CL:1000413;2.91e-18;9!CL:0002544;2.13e-14;6!CL:0002078;2.52e-14;45!CL:0000097;2.69e-12;5!CL:0000623;3.39e-12;3!CL:0000094;8.33e-12;8!CL:0000213;4.16e-09;58!CL:0000215;4.16e-09;58!CL:0002262;6.53e-09;2!CL:1000398;6.53e-09;2!CL:0000081;1.76e-08;11!CL:0002545;8.15e-08;2!CL:0002188;2.33e-07;5!CL:0000163;7.91e-07;9|ontology_enrichment_celltype_v019_2=CL:0000115,3.75e-28,36;CL:0002139,4.37e-22,24;CL:0000071,8.09e-22,18;CL:0002546,8.09e-22,18;CL:0002078,1.32e-21,45;CL:1000413,2.34e-18,9;CL:0000213,9.29e-16,58;CL:0000215,9.29e-16,58;CL:0002544,1.20e-14,6;CL:0000738,1.08e-13,136;CL:0000097,3.13e-12,5;CL:0002028,3.13e-12,5;CL:0000623,3.96e-12,3;CL:0000825,3.96e-12,3;CL:0000094,8.67e-12,8;CL:0000037,9.24e-11,168;CL:0000766,4.10e-10,72;CL:0000988,7.14e-10,177;CL:0002032,1.38e-09,161;CL:0000837,1.38e-09,161;CL:0002262,6.31e-09,2;CL:1000398,6.31e-09,2;CL:0000081,1.81e-08,11;CL:0002031,5.80e-08,120;CL:0000222,6.89e-08,121;CL:0002545,9.41e-08,2;CL:0002188,2.52e-07,5;CL:0000791,7.78e-07,18;CL:0000789,7.78e-07,18;CL:0002420,7.78e-07,18;CL:0002419,7.78e-07,18;CL:0000790,7.78e-07,18;CL:0000163,8.57e-07,9|ontology_enrichment_development_v019=CL:0002546;1.18e-21;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003081!5.53e-16!216;UBERON:0001986!7.33e-13!18;UBERON:0004638!7.33e-13!18;UBERON:0004852!7.33e-13!18;UBERON:0002371!1.90e-12!80;UBERON:0002193!2.72e-12!112;UBERON:0001474!3.52e-12!86;UBERON:0002390!1.06e-11!102;UBERON:0003061!1.06e-11!102;UBERON:0000055!3.31e-11!69;UBERON:0000487!1.74e-10!22;UBERON:0001981!1.94e-10!60;UBERON:0007500!1.94e-10!60;UBERON:0004537!1.94e-10!60;UBERON:0006965!1.94e-10!60;UBERON:0002405!4.87e-10!115;UBERON:0004765!2.63e-09!101;UBERON:0001434!2.63e-09!101;UBERON:0006914!2.44e-08!25;UBERON:0002049!2.59e-08!79;UBERON:0007798!2.59e-08!79;UBERON:0004535!9.90e-07!110|ontology_enrichment_uberon_v019=UBERON:0004638;1.18e-21;18!UBERON:0001986;1.18e-21;18!UBERON:0004852;1.18e-21;18!UBERON:0003915;2.91e-18;9!UBERON:0004700;2.91e-18;9!UBERON:0001917;2.91e-18;9!UBERON:0000487;2.73e-17;22!UBERON:0006914;6.19e-15;25!UBERON:0000490;2.12e-10;33!UBERON:0001281;6.53e-09;2!UBERON:0003497;6.53e-09;2!UBERON:0003909;6.53e-09;2!UBERON:0003835;6.53e-09;2!UBERON:0003914;3.90e-08;74!UBERON:0005800;8.15e-08;2!UBERON:0001515;8.15e-08;2!UBERON:0000055;7.80e-07;65|ontology_enrichment_uberon_v019_2=UBERON:0004638,8.09e-22,18;UBERON:0001986,8.09e-22,18;UBERON:0004852,8.09e-22,18;UBERON:0003915,2.34e-18,9;UBERON:0004700,2.34e-18,9;UBERON:0001917,2.34e-18,9;UBERON:0000487,2.02e-17,22;UBERON:0006914,4.76e-15,25;UBERON:0003081,5.97e-15,203;UBERON:0000055,4.04e-14,68;UBERON:0007500,2.48e-13,59;UBERON:0001981,2.48e-13,59;UBERON:0004537,2.48e-13,59;UBERON:0006965,2.48e-13,59;UBERON:0002049,9.96e-12,78;UBERON:0007798,9.96e-12,78;UBERON:0004535,2.92e-10,109;UBERON:0001009,7.52e-10,112;UBERON:0001281,6.31e-09,2;UBERON:0003497,6.31e-09,2;UBERON:0003909,6.31e-09,2;UBERON:0003835,6.31e-09,2;UBERON:0004872,2.39e-08,83;UBERON:0003914,2.45e-08,117;UBERON:0005800,9.41e-08,2;UBERON:0001515,9.41e-08,2;UBERON:0002193,4.81e-07,108|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0.697801167972428,0.436882744260345,0,0,0,0.672325146451775,1.20538905604795,0,0.487932798790507,0,0.204000691244253,0.313454721478088,0,0.958120975510189,0.376627918784408,0,0.0821005894499457,0,8.65401409067589,0.383829398097213,1.23852898652861,0,0,0,0.542270404062111,0,0.587200878669695,1.66198622559563,1.80490002723128,1.51907609501096,0,0,0.257575567634187,0.290796477559129,0,0.242584061187816,0.464858073811369,1.6446715520873,0.929119112685311,0.863077176966451,0.512321413058201,0.709446689665756,1.03423704220986,0.645484683583826,0,0.564727018627814,0.27290615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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:96793396..96793414,+ | |||
|id=chr12:96793396..96793414,+ | |||
|ontology_enrichment_celltype=CL:0000738!6.55e-24!140;CL:0000037!9.62e-22!172;CL:0000566!9.62e-22!172;CL:0000988!1.21e-20!182;CL:0002032!2.18e-18!165;CL:0000837!2.18e-18!165;CL:0002031!1.24e-16!124;CL:0000860!4.39e-16!45;CL:0000115!5.50e-16!35;CL:0002057!7.55e-16!42;CL:0002087!9.47e-16!119;CL:0000766!2.63e-15!76;CL:0002139!7.24e-15!24;CL:0000763!2.27e-13!112;CL:0000049!2.27e-13!112;CL:0000557!2.79e-13!71;CL:0000071!7.33e-13!18;CL:0002546!7.33e-13!18;CL:0000839!8.04e-12!70;CL:0002078!3.27e-10!44;CL:0002009!5.21e-10!65;CL:0002194!6.42e-10!63;CL:0000576!6.42e-10!63;CL:0000040!6.42e-10!63;CL:0000559!6.42e-10!63;CL:0000213!1.95e-09!57;CL:0000215!1.95e-09!57;CL:0000034!5.22e-09!444;CL:0000048!6.79e-09!430;CL:0000723!2.03e-08!436;CL:0000144!1.00e-07!625;CL:0002371!1.09e-07!591;CL:0000134!2.18e-07!358;CL:0000219!2.57e-07!390;CL:0002320!6.46e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000115;5.43e-25;36!CL:0002139;5.84e-22;24!CL:0000071;1.18e-21;18!CL:1000413;2.91e-18;9!CL:0002544;2.13e-14;6!CL:0002078;2.52e-14;45!CL:0000097;2.69e-12;5!CL:0000623;3.39e-12;3!CL:0000094;8.33e-12;8!CL:0000213;4.16e-09;58!CL:0000215;4.16e-09;58!CL:0002262;6.53e-09;2!CL:1000398;6.53e-09;2!CL:0000081;1.76e-08;11!CL:0002545;8.15e-08;2!CL:0002188;2.33e-07;5!CL:0000163;7.91e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,3.75e-28,36;CL:0002139,4.37e-22,24;CL:0000071,8.09e-22,18;CL:0002546,8.09e-22,18;CL:0002078,1.32e-21,45;CL:1000413,2.34e-18,9;CL:0000213,9.29e-16,58;CL:0000215,9.29e-16,58;CL:0002544,1.20e-14,6;CL:0000738,1.08e-13,136;CL:0000097,3.13e-12,5;CL:0002028,3.13e-12,5;CL:0000623,3.96e-12,3;CL:0000825,3.96e-12,3;CL:0000094,8.67e-12,8;CL:0000037,9.24e-11,168;CL:0000766,4.10e-10,72;CL:0000988,7.14e-10,177;CL:0002032,1.38e-09,161;CL:0000837,1.38e-09,161;CL:0002262,6.31e-09,2;CL:1000398,6.31e-09,2;CL:0000081,1.81e-08,11;CL:0002031,5.80e-08,120;CL:0000222,6.89e-08,121;CL:0002545,9.41e-08,2;CL:0002188,2.52e-07,5;CL:0000791,7.78e-07,18;CL:0000789,7.78e-07,18;CL:0002420,7.78e-07,18;CL:0002419,7.78e-07,18;CL:0000790,7.78e-07,18;CL:0000163,8.57e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002546;1.18e-21;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!5.53e-16!216;UBERON:0001986!7.33e-13!18;UBERON:0004638!7.33e-13!18;UBERON:0004852!7.33e-13!18;UBERON:0002371!1.90e-12!80;UBERON:0002193!2.72e-12!112;UBERON:0001474!3.52e-12!86;UBERON:0002390!1.06e-11!102;UBERON:0003061!1.06e-11!102;UBERON:0000055!3.31e-11!69;UBERON:0000487!1.74e-10!22;UBERON:0001981!1.94e-10!60;UBERON:0007500!1.94e-10!60;UBERON:0004537!1.94e-10!60;UBERON:0006965!1.94e-10!60;UBERON:0002405!4.87e-10!115;UBERON:0004765!2.63e-09!101;UBERON:0001434!2.63e-09!101;UBERON:0006914!2.44e-08!25;UBERON:0002049!2.59e-08!79;UBERON:0007798!2.59e-08!79;UBERON:0004535!9.90e-07!110 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.18e-21;18!UBERON:0001986;1.18e-21;18!UBERON:0004852;1.18e-21;18!UBERON:0003915;2.91e-18;9!UBERON:0004700;2.91e-18;9!UBERON:0001917;2.91e-18;9!UBERON:0000487;2.73e-17;22!UBERON:0006914;6.19e-15;25!UBERON:0000490;2.12e-10;33!UBERON:0001281;6.53e-09;2!UBERON:0003497;6.53e-09;2!UBERON:0003909;6.53e-09;2!UBERON:0003835;6.53e-09;2!UBERON:0003914;3.90e-08;74!UBERON:0005800;8.15e-08;2!UBERON:0001515;8.15e-08;2!UBERON:0000055;7.80e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,8.09e-22,18;UBERON:0001986,8.09e-22,18;UBERON:0004852,8.09e-22,18;UBERON:0003915,2.34e-18,9;UBERON:0004700,2.34e-18,9;UBERON:0001917,2.34e-18,9;UBERON:0000487,2.02e-17,22;UBERON:0006914,4.76e-15,25;UBERON:0003081,5.97e-15,203;UBERON:0000055,4.04e-14,68;UBERON:0007500,2.48e-13,59;UBERON:0001981,2.48e-13,59;UBERON:0004537,2.48e-13,59;UBERON:0006965,2.48e-13,59;UBERON:0002049,9.96e-12,78;UBERON:0007798,9.96e-12,78;UBERON:0004535,2.92e-10,109;UBERON:0001009,7.52e-10,112;UBERON:0001281,6.31e-09,2;UBERON:0003497,6.31e-09,2;UBERON:0003909,6.31e-09,2;UBERON:0003835,6.31e-09,2;UBERON:0004872,2.39e-08,83;UBERON:0003914,2.45e-08,117;UBERON:0005800,9.41e-08,2;UBERON:0001515,9.41e-08,2;UBERON:0002193,4.81e-07,108 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0.697801167972428,0.436882744260345,0,0,0,0.672325146451775,1.20538905604795,0,0.487932798790507,0,0.204000691244253,0.313454721478088,0,0.958120975510189,0.376627918784408,0,0.0821005894499457,0,8.65401409067589,0.383829398097213,1.23852898652861,0,0,0,0.542270404062111,0,0.587200878669695,1.66198622559563,1.80490002723128,1.51907609501096,0,0,0.257575567634187,0.290796477559129,0,0.242584061187816,0.464858073811369,1.6446715520873,0.929119112685311,0.863077176966451,0.512321413058201,0.709446689665756,1.03423704220986,0.645484683583826,0,0.564727018627814,0.272906150057846,1.34834090667051,0,0.320929027076094,0,0.329851300186716,0.797854630486527,0.426224750532694,0.290209238628584,0.56738522469114,0.622822248995575,1.25624332628372,1.0429658368404,0.65156653411535,0.605399502633369,0.736555271975129,0.632924774881769,0,0.637812899895131,0.209658645508376,0.22465726229299,0.750884464207532,0.16072558669708,0,0.99458338599545,0.365328307529268,0,0,0.889509253863555,0.853460445133014,0.400395987036012,0,0,0,0,0.587237189370939,0,6.60856642895129,1.12101712596307,0.526768169550154,0.983548850569165,1.96505381374582,1.85041349099558,0.167186495390678,0,0,0,0,0.294605907474837,0.443067789167242,0.812411591295047,0,0.130059347559878,0,0,0,0.14828656316206,0.267540828089713,0,0.226618685395132,2.29932296161153,0.68725489096526,0.506039384039006,0.318565414324097,0.651083453856419,0,0,0.255973222308837,0,0.236777252044017,0,2.01606743224732,4.01160293675261,2.60683926989038,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,0,0.348259474598534,0,0.715471872916026,0.571994910780128,0.74291500265913,1.78886166630035,2.58070378531837,1.73570250803797,0,2.51699661725944,1.10047216776027,0.835979866147242,0.775250277507987,0.35576626268671,1.33888245105868,0.805658634218294,0.760272105718513,1.95249646038536,1.10298924103761,1.62028389576352,0.625098097988558,1.12264686313085,0.450445921933289,9.19899824795299,0.949265659568129,2.74802615895611,6.58902087180316,0,0,0,0,0.132409180813219,0,0,0,0,0.24666754841716,0,0.808264032418128,0.490385709340376,0,0,0,0,0.570471821544449,0.298897361103602,0.117434498643765,0.161872944368132,0.140450806702248,0,0,0,0,0,0,0,0.168336113954066,0,0,0.877955241761676,0,0.150238058906597,0,0,0,0,0,0.103052529238439,0.257640540045629,0,0,0,0,0,0,0.710019185033229,0.10075209822764,0.169560592310488,0.386521706326594,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0.118306800039844,0,0.241011029883482,0,0.217879444092406,0,0,0,0.38474715694639,4.42893272774789,5.60967095213783,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,1.38895653772983,0.570762456703795,0.790204397959275,0,0,0,0,0,0,0,0,0,0.383382679165211,3.94130590316755,0.44024217006613,3.10992173311158,1.15295962733569,4.54472760334968,0,0.381988425558278,0,0,0,0,0.285826432630578,0.112131084345361,0,0.22001485746285,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0.144781306667579,0,0,0.112085143993527,2.1673383622212,4.31255149719035,3.20857590699371,0,0,0,0.167516265334349,0.637938751653163,5.24304916763028,0,2.90090859405225,0,0.500170521059677,0,0.207970861530807,0,0,0,0,0,0,0,0.184369168541703,0.260650843404249,0,0,0.82707210449155,1.50999940573032,1.38745825144478,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0.0821271560138091,0,0.348631135379878,0,0,0,0,0,0,0,0.0770153371044148,0,1.46139224653261,0.316654886678627,2.27466768141793,2.55140557914773,0.647747748306418,3.08454505380579,0,0,0,0,0,0,0,0,0,0,0,0.183138929636687,0.082509499920588,0,0,0,0,0,0,0,0.107420244868274,0,0,0.0890320356467374,0,0,0,0,0,0.31481234683064,0.6970372701606,0.616067160352178,0,0,0.37064843820784,0.143124886741991,0,0,0,0.255897791311334,0,0,0.78494864019923,0,0,0.117812402345686,0.202182481573316,0,0.842516912477962,0,0,1.05650146756755,0.136499911407986,0.141405431953713,0,0,0,0.438450885253763,0,0,0,0,1.69017361519345,0.143411352204052,0,0.35667105148125,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0.229723400206959,0,0,0,0,0,0,0.540031437238115,0,0,0,0,0,0.28853842595289,0.142283686696828,0,0.199579371432817,0.191505370132367,0.423347165447766,0.324621940274555,0.280797178113459,0,0,0,0.338583555603207,0,0.403599414382095,0.425846237690326,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0,0,0,0.568272293612826,0,0,0,0,0,0,0.16480387422676,0,0.19924798825107,0,0,0,0.123084805461069,0,0.0898683511473268,0,0,0.0986434056369336,2.3948309234694,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0,0.173624994933292,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0.108647371922008,0.31900115973192,0.183195186803725,0,0,0.470940769185074,0,0,0,0,0,0,0.210998064528027,0,0.141353071433941,0,0,0.0884575645033392,0,0.296521128680622,0,0,0.134802265961354,0,0,0.182454789215666,0,0,0,0,0,0.063186579628488,0.300646838828985,0.103688191397247,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0.0967563312890851,0.0730893170861856,0.164230914106418,0,0,0,0,0.19871461170299,0.0633107959558787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| |||
|short_description=p@chr12:96793396..96793414,+ | |||
}} |
Revision as of 01:09, 11 September 2013
Short description: | p@chr12:96793396..96793414, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:96793396..96793414, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 8.09e-22 | 18 |
endothelium | 8.09e-22 | 18 |
cardiovascular system endothelium | 8.09e-22 | 18 |
endothelial tube | 2.34e-18 | 9 |
arterial system endothelium | 2.34e-18 | 9 |
endothelium of artery | 2.34e-18 | 9 |
simple squamous epithelium | 2.02e-17 | 22 |
squamous epithelium | 4.76e-15 | 25 |
lateral plate mesoderm | 5.97e-15 | 203 |
vessel | 4.04e-14 | 68 |
epithelial tube open at both ends | 2.48e-13 | 59 |
blood vessel | 2.48e-13 | 59 |
blood vasculature | 2.48e-13 | 59 |
vascular cord | 2.48e-13 | 59 |
vasculature | 9.96e-12 | 78 |
vascular system | 9.96e-12 | 78 |
cardiovascular system | 2.92e-10 | 109 |
circulatory system | 7.52e-10 | 112 |
hepatic sinusoid | 6.31e-09 | 2 |
abdomen blood vessel | 6.31e-09 | 2 |
sinusoid | 6.31e-09 | 2 |
abdominal segment blood vessel | 6.31e-09 | 2 |
splanchnic layer of lateral plate mesoderm | 2.39e-08 | 83 |
epithelial tube | 2.45e-08 | 117 |
segment of aorta | 9.41e-08 | 2 |
thoracic aorta | 9.41e-08 | 2 |
hemolymphoid system | 4.81e-07 | 108 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.