FFCP PHASE1:Hg19::chr12:129308446..129308453,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=121260|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=23090|TSSclassifier=S|UniProt=|association_with_transcript=87bp_to_uc001uhv.2_5end|coexpression_cluster_id=C1662|description=CAGE_peak_7_at_SLC15A4_5end|id=chr12:129308446..129308453,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000094;3.20e-56;8!CL:0000784;4.17e-55;3!CL:0000775;3.76e-54;3!CL:0000081;5.42e-41;11!CL:0000771;2.27e-37;2!CL:0000451;1.31e-15;10!CL:0000623;3.16e-07;3|ontology_enrichment_celltype_v019_2=CL:0000094,3.20e-56,8;CL:0000784,4.17e-55,3;CL:0000775,3.76e-54,3;CL:0000081,5.42e-41,11;CL:0000771,2.27e-37,2;CL:0000451,1.31e-15,10;CL:0000738,1.46e-12,136;CL:0000037,4.75e-10,168;CL:0000988,1.67e-09,177;CL:0000766,8.37e-09,72;CL:0000623,3.35e-07,3;CL:0000825,3.35e-07,3|ontology_enrichment_development_v019=UBERON:0005425;4.69e-19;1!UBERON:0003056;3.16e-07;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0000941;4.69e-19;1!UBERON:0001785;4.69e-19;1!UBERON:0002464;4.69e-19;1!UBERON:0004904;4.69e-19;1!UBERON:0001021;4.69e-19;1!UBERON:0003714;3.27e-10;2!UBERON:0005162;3.27e-10;2!UBERON:0000122;3.27e-10;2|ontology_enrichment_uberon_v019_2=UBERON:0000941,4.69e-19,1;UBERON:0001785,4.69e-19,1;UBERON:0002464,4.69e-19,1;UBERON:0004904,4.69e-19,1;UBERON:0001021,4.69e-19,1;UBERON:0003902,4.69e-19,1;UBERON:0005425,4.69e-19,1;UBERON:0003714,3.27e-10,2;UBERON:0005162,3.27e-10,2;UBERON:0000122,3.27e-10,2|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0.61130724598361,0.164201178899891,0.629686250509434,0,0,0.464448369948228,0,0.30120591877825,0,0.232401601740905,0,0,0,0,0.434021741431704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0.19891667719909,0,0,0,0,0,0,0.574752439954483,0,0,0.569212969109448,1.76171156811282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0.403213486449465,0,0.144824403882799,0,0,0.12786256184353,0,0,0.144846518960824,0,0,0,0,0.087834785693126,0.0654895377488563,0,0.370784442784429,0,0.174129737299267,0.26591592103773,9.06264372360299,10.2959083940423,8.17206502925043,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.27121669744253,11.6334079244498,0,0,0.12663051166458,0.132409180813219,0,0,0,0,0.49333509683432,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0.100528972411631,0.0925884451585296,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0.234004265139238,0.148631162288728,0,0,0,0,0.290633938513962,0,0,0,0,0,0,0.126995788584338,0.381988425558278,0,0,0,0.300343057843917,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0.112085143993527,0.197030760201927,0,1.28343036279748,0,0,0,0,0,3.74503511973591,2.99161459204025,2.07207756718018,0,0.500170521059677,0,0,0,0.315404830067869,0.117141414992713,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0.154209693802656,0.177561725313127,0.164254312027618,0,0.232420756919918,0,0,0,0.114814448164607,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0.328014645699706,0,0.206082023295445,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0.10115778085555,0.464845549297286,0.31481234683064,0,0,0,0,0.18532421910392,0,0,0,0.190630193923825,0,0,0.318203247925937,0,0,0,0.235624804691373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0.30982349809975,0,0,0,0,0,0.422215270595328,0.329294892959902,0,0,0,0,0,0,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0.185803175125719,0.28853842595289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0.18714054040822,0,0.242721043499027,0,0,0.23874448473769,0,0,0,0.140669416410513,0,0.494411622680279,0,0.19924798825107,0.552567831062295,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0.591095237907095,0.438770794307945,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208843899010911,0.134802265961354,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0730893170861856,0,0.0969890164884194,0.0882561266915003,0.677942222341597,0.274083849293502,0,0.50648636764703,0,0,0,0.19980960958213,0,0,0,0,0.372757606696298,0,0,0.104602846312333,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0.0671834724867263,0.720599767084807,0,0,0.0824158583811665,0,0,0.76205998859206,0,0.272406812223151,0,0,0,0,0,0.182248669974074,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439656701034247,0,0,0,0,0,0,0.157204305099666,0,0.496166021811951,0.395223263795889,0.243585196761792,0,0,0.2506898940227,0,0,0.15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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=121260 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23090 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=87bp_to_uc001uhv.2_5end | |||
|coexpression_cluster_id=C1662 | |||
|description=CAGE_peak_7_at_SLC15A4_5end | |||
|id=chr12:129308446..129308453,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000094;3.20e-56;8!CL:0000784;4.17e-55;3!CL:0000775;3.76e-54;3!CL:0000081;5.42e-41;11!CL:0000771;2.27e-37;2!CL:0000451;1.31e-15;10!CL:0000623;3.16e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000094,3.20e-56,8;CL:0000784,4.17e-55,3;CL:0000775,3.76e-54,3;CL:0000081,5.42e-41,11;CL:0000771,2.27e-37,2;CL:0000451,1.31e-15,10;CL:0000738,1.46e-12,136;CL:0000037,4.75e-10,168;CL:0000988,1.67e-09,177;CL:0000766,8.37e-09,72;CL:0000623,3.35e-07,3;CL:0000825,3.35e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0005425;4.69e-19;1!UBERON:0003056;3.16e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;4.69e-19;1!UBERON:0001785;4.69e-19;1!UBERON:0002464;4.69e-19;1!UBERON:0004904;4.69e-19;1!UBERON:0001021;4.69e-19;1!UBERON:0003714;3.27e-10;2!UBERON:0005162;3.27e-10;2!UBERON:0000122;3.27e-10;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,4.69e-19,1;UBERON:0001785,4.69e-19,1;UBERON:0002464,4.69e-19,1;UBERON:0004904,4.69e-19,1;UBERON:0001021,4.69e-19,1;UBERON:0003902,4.69e-19,1;UBERON:0005425,4.69e-19,1;UBERON:0003714,3.27e-10,2;UBERON:0005162,3.27e-10,2;UBERON:0000122,3.27e-10,2 | |||
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|short_description=p7@SLC15A4 | |||
}} |
Revision as of 21:43, 10 September 2013
Short description: | p7@SLC15A4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_SLC15A4_5end |
Coexpression cluster: | C1662_Eosinophils_Dendritic_Neutrophils_Whole_renal_splenic_giant |
Association with transcript: | 87bp_to_uc001uhv.2_5end |
EntrezGene: | SLC15A4 |
HGNC: | 23090 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte | 3.20e-56 | 8 |
plasmacytoid dendritic cell | 4.17e-55 | 3 |
neutrophil | 3.76e-54 | 3 |
blood cell | 5.42e-41 | 11 |
eosinophil | 2.27e-37 | 2 |
dendritic cell | 1.31e-15 | 10 |
leukocyte | 1.46e-12 | 136 |
hematopoietic stem cell | 4.75e-10 | 168 |
hematopoietic cell | 1.67e-09 | 177 |
myeloid leukocyte | 8.37e-09 | 72 |
natural killer cell | 3.35e-07 | 3 |
pro-NK cell | 3.35e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 4.69e-19 | 1 |
cranial nerve | 4.69e-19 | 1 |
nerve trunk | 4.69e-19 | 1 |
nerve connecting eye with brain | 4.69e-19 | 1 |
nerve | 4.69e-19 | 1 |
retinal neural layer | 4.69e-19 | 1 |
presumptive neural retina | 4.69e-19 | 1 |
neural tissue | 3.27e-10 | 2 |
multi cell component structure | 3.27e-10 | 2 |
neuron projection bundle | 3.27e-10 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.