FFCP PHASE1:Hg19::chr13:76363027..76363039,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4008|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6646|TSSclassifier=S|UniProt=E9PLU6|association_with_transcript=53bp_to_ENST00000497947_5end|coexpression_cluster_id=C1190|description=CAGE_peak_22_at_LMO7_5end|id=chr13:76363027..76363039,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000222;6.95e-07;1|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0008947;5.57e-18;29|ontology_enrichment_disease=DOID:305!7.20e-10!106;DOID:0050687!2.07e-08!143|ontology_enrichment_disease_v019=DOID:3111;6.95e-07;1!DOID:3603;6.95e-07;1|ontology_enrichment_disease_v019_2=DOID:305,7.90e-09,106;DOID:0050687,7.86e-08,143;DOID:3111,5.37e-07,1;DOID:3603,5.37e-07,1|ontology_enrichment_uberon_v019=UBERON:0001737;2.18e-50;9!UBERON:0001557;2.18e-50;9!UBERON:0000072;1.76e-12;37!UBERON:0000065;3.35e-10;44!UBERON:0001134;9.47e-09;16!UBERON:0002036;9.47e-09;16!UBERON:0003978;4.85e-08;3!UBERON:0000946;4.85e-08;3!UBERON:0001004;5.11e-07;65!UBERON:0002426;6.95e-07;1!UBERON:0003831;6.95e-07;1!UBERON:0003898;6.95e-07;1!UBERON:0004830;6.95e-07;1!UBERON:0003830;6.95e-07;1!UBERON:0005175;6.95e-07;1!UBERON:0001774;6.95e-07;1!UBERON:0001103;6.95e-07;1|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.13e-50,9;UBERON:0001557,1.27e-28,19;UBERON:0008947,2.91e-13,38;UBERON:0003258,2.91e-13,38;UBERON:0000072,1.12e-12,47;UBERON:0000065,9.23e-11,54;UBERON:0001004,9.53e-09,74;UBERON:0003978,5.22e-08,3;UBERON:0009751,5.22e-08,3;UBERON:0000946,5.22e-08,3;UBERON:0002523,5.22e-08,3;UBERON:0005983,5.22e-08,3;UBERON:0002165,5.22e-08,3;UBERON:0002062,5.22e-08,3;UBERON:0007280,5.22e-08,3;UBERON:0002426,8.02e-07,1;UBERON:0003831,8.02e-07,1;UBERON:0003898,8.02e-07,1;UBERON:0004830,8.02e-07,1;UBERON:0003830,8.02e-07,1;UBERON:0005175,8.02e-07,1;UBERON:0001774,8.02e-07,1;UBERON:0001103,8.02e-07,1;UBERON:0010084,8.02e-07,1|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0.760272105718513,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0.408308342509787,0,0,0,0,0,0,0.168336113954066,0,1.10825646193673,0,0,0.150238058906597,0,0,1.06778694409284,0,0,0.721367704669072,0,0.18611685633159,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,3.66751080123516,3.37169380156203,4.09718750801919,2.86764329104224,3.05031221729369,4.03360052488864,2.69662616320329,4.70931516300831,4.23221872641029,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0.579125226670317,0.410952645100767,2.86497541183833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0.521301686808497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0.410635780069046,0.519254429183621,0.116210378459959,0,0,0.460404944679482,0.459257792658427,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721287081534056,0.54941678891006,0.247528499761764,0,0,1.6068392984416,2.90012154876366,0.154048617114644,0,0.413509717453592,0,0.145016693914229,0.681813019328807,9.17029967161395,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632758849437452,0,0,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0,0,0.409499734223957,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0.593929361665277,0.307160702099232,0,0,0,0,0.211125408127993,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0.341826167541004,0,0,0,0.638002319463839,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0,0,0,0,0,0,2.40773294189637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0.0979923974143777,0,0,0,1.64485763191445,0.950161122120412,1.8065400551706,0,0,0.225980740780532,0,0,0,0,0.160317640503067,0,0.39961921916426,0,0,0,4.17758914165634,0,0.471388069233591,2.17446729717782,3.24268823568233,0,0,0,0,0,0,0,0.558564802544508,1.14580212005842,1.43574604915363,0.199679000498991,0,0.89268582976749,0.739018197353989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,2.05304205461195,0.704815022316672,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,1.65882483136342,0,0,0,0,0,0,0.107410557042488,0,0,4.00027764663154,0,0,2.52369796457302,0.963099152036517,0.857766365499703,0,0,0,0,0,0,0,0,0,0,0,2.76344273384959,0,0,0,0,0,0,0,2.95836972702078,0,0,0,0.567515953566836,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=4008 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6646 | |||
|TSSclassifier=S | |||
|UniProt=E9PLU6 | |||
|association_with_transcript=53bp_to_ENST00000497947_5end | |||
|coexpression_cluster_id=C1190 | |||
|description=CAGE_peak_22_at_LMO7_5end | |||
|id=chr13:76363027..76363039,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000222;6.95e-07;1 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;5.57e-18;29 | |||
|ontology_enrichment_disease=DOID:305!7.20e-10!106;DOID:0050687!2.07e-08!143 | |||
|ontology_enrichment_disease_v019=DOID:3111;6.95e-07;1!DOID:3603;6.95e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:305,7.90e-09,106;DOID:0050687,7.86e-08,143;DOID:3111,5.37e-07,1;DOID:3603,5.37e-07,1 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.18e-50;9!UBERON:0001557;2.18e-50;9!UBERON:0000072;1.76e-12;37!UBERON:0000065;3.35e-10;44!UBERON:0001134;9.47e-09;16!UBERON:0002036;9.47e-09;16!UBERON:0003978;4.85e-08;3!UBERON:0000946;4.85e-08;3!UBERON:0001004;5.11e-07;65!UBERON:0002426;6.95e-07;1!UBERON:0003831;6.95e-07;1!UBERON:0003898;6.95e-07;1!UBERON:0004830;6.95e-07;1!UBERON:0003830;6.95e-07;1!UBERON:0005175;6.95e-07;1!UBERON:0001774;6.95e-07;1!UBERON:0001103;6.95e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.13e-50,9;UBERON:0001557,1.27e-28,19;UBERON:0008947,2.91e-13,38;UBERON:0003258,2.91e-13,38;UBERON:0000072,1.12e-12,47;UBERON:0000065,9.23e-11,54;UBERON:0001004,9.53e-09,74;UBERON:0003978,5.22e-08,3;UBERON:0009751,5.22e-08,3;UBERON:0000946,5.22e-08,3;UBERON:0002523,5.22e-08,3;UBERON:0005983,5.22e-08,3;UBERON:0002165,5.22e-08,3;UBERON:0002062,5.22e-08,3;UBERON:0007280,5.22e-08,3;UBERON:0002426,8.02e-07,1;UBERON:0003831,8.02e-07,1;UBERON:0003898,8.02e-07,1;UBERON:0004830,8.02e-07,1;UBERON:0003830,8.02e-07,1;UBERON:0005175,8.02e-07,1;UBERON:0001774,8.02e-07,1;UBERON:0001103,8.02e-07,1;UBERON:0010084,8.02e-07,1 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0.760272105718513,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0.408308342509787,0,0,0,0,0,0,0.168336113954066,0,1.10825646193673,0,0,0.150238058906597,0,0,1.06778694409284,0,0,0.721367704669072,0,0.18611685633159,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,3.66751080123516,3.37169380156203,4.09718750801919,2.86764329104224,3.05031221729369,4.03360052488864,2.69662616320329,4.70931516300831,4.23221872641029,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0.579125226670317,0.410952645100767,2.86497541183833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0.521301686808497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0.410635780069046,0.519254429183621,0.116210378459959,0,0,0.460404944679482,0.459257792658427,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721287081534056,0.54941678891006,0.247528499761764,0,0,1.6068392984416,2.90012154876366,0.154048617114644,0,0.413509717453592,0,0.145016693914229,0.681813019328807,9.17029967161395,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632758849437452,0,0,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0,0,0.409499734223957,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0.593929361665277,0.307160702099232,0,0,0,0,0.211125408127993,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0.341826167541004,0,0,0,0.638002319463839,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0,0,0,0,0,0,2.40773294189637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0.0979923974143777,0,0,0,1.64485763191445,0.950161122120412,1.8065400551706,0,0,0.225980740780532,0,0,0,0,0.160317640503067,0,0.39961921916426,0,0,0,4.17758914165634,0,0.471388069233591,2.17446729717782,3.24268823568233,0,0,0,0,0,0,0,0.558564802544508,1.14580212005842,1.43574604915363,0.199679000498991,0,0.89268582976749,0.739018197353989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,2.05304205461195,0.704815022316672,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,1.65882483136342,0,0,0,0,0,0,0.107410557042488,0,0,4.00027764663154,0,0,2.52369796457302,0.963099152036517,0.857766365499703,0,0,0,0,0,0,0,0,0,0,0,2.76344273384959,0,0,0,0,0,0,0,2.95836972702078,0,0,0,0.567515953566836,0.552317850755522,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0.6124909547064,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0.198916222116275,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0.620916591138472,0,0.685952037749674,0,0,0.354581522651905,0.111231401892069,0,0,0,0,0.215927591218621,0,0,0,0,9.73606324894445,0,0,0,0,0,0.709992004383392,1.27820107138737,0,1.3746412112643,0,0,0,0.098150233615243,0,0,0.923965261706223,4.6392577253528,0.485710993059139,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0.240724100067505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.426467963801962,3.57096647195611,0,0,0,0,0,0.653150243690884,4.44903291410865,0.134704106029175,0,0,0,0.533636729388577,3.8614456457388,0,0,0,0,0,0,0 | |||
|short_description=p22@LMO7 | |||
}} |
Revision as of 02:47, 11 September 2013
Short description: | p22@LMO7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_22_at_LMO7_5end |
Coexpression cluster: | C1190_Skeletal_rhabdomyosarcoma_mesenchymal_giant_mucinous_skeletal_Hep2 |
Association with transcript: | 53bp_to_ENST00000497947_5end |
EntrezGene: | LMO7 |
HGNC: | 6646 |
UniProt: | E9PLU6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
larynx | 2.13e-50 | 9 |
upper respiratory tract | 1.27e-28 | 19 |
respiratory primordium | 2.91e-13 | 38 |
endoderm of foregut | 2.91e-13 | 38 |
segment of respiratory tract | 1.12e-12 | 47 |
respiratory tract | 9.23e-11 | 54 |
respiratory system | 9.53e-09 | 74 |
valve | 5.22e-08 | 3 |
cardiac mesenchyme | 5.22e-08 | 3 |
cardial valve | 5.22e-08 | 3 |
tunica intima | 5.22e-08 | 3 |
heart layer | 5.22e-08 | 3 |
endocardium | 5.22e-08 | 3 |
endocardial cushion | 5.22e-08 | 3 |
presumptive endocardium | 5.22e-08 | 3 |
chest muscle | 8.02e-07 | 1 |
respiratory system muscle | 8.02e-07 | 1 |
skeletal muscle of trunk | 8.02e-07 | 1 |
respiratory system skeletal muscle | 8.02e-07 | 1 |
thoracic segment muscle | 8.02e-07 | 1 |
chest organ | 8.02e-07 | 1 |
muscle of trunk | 8.02e-07 | 1 |
diaphragm | 8.02e-07 | 1 |
future diaphragm | 8.02e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 7.90e-09 | 106 |
cell type cancer | 7.86e-08 | 143 |
cystadenocarcinoma | 5.37e-07 | 1 |
mucinous cystadenocarcinoma | 5.37e-07 | 1 |
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