FFCP PHASE1:Hg19::chr17:38172763..38172779,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C1432|description=CAGE_peak_at_chr17:38172763..38172779,+|id=chr17:38172763..38172779,+|ontology_enrichment_celltype=CL:0000359!1.42e-18!32;CL:0000680!2.48e-15!57;CL:0000056!2.48e-15!57;CL:0000355!2.48e-15!57;CL:0000192!2.43e-13!42;CL:0000514!2.43e-13!42;CL:0002539!2.23e-12!10;CL:0000187!4.07e-11!54;CL:0000183!7.06e-10!59;CL:0000393!1.18e-09!60;CL:0000211!1.18e-09!60;CL:0002593!1.33e-08!2;CL:0000515!5.06e-08!4;CL:0000222!9.00e-08!119;CL:0002589!2.89e-07!2;CL:0002494!3.69e-07!16;CL:0002595!3.71e-07!5|ontology_enrichment_celltype_v019=CL:0002593;1.50e-23;2!CL:0000359;4.13e-17;32!CL:0002138;4.37e-17;6!CL:0002592;8.12e-16;3!CL:0002595;5.32e-10;5!CL:0000192;5.45e-08;43!CL:0002596;4.82e-07;2!CL:0002494;8.84e-07;16|ontology_enrichment_celltype_v019_2=CL:0002593,1.78e-23,2;CL:0005020,3.91e-17,6;CL:0002138,3.91e-17,6;CL:0005022,3.91e-17,6;CL:0000359,2.16e-16,32;CL:0002592,9.09e-16,3;CL:0000192,4.84e-12,43;CL:0000514,4.84e-12,43;CL:0002595,5.69e-10,5;CL:0000187,2.84e-09,55;CL:0000680,9.29e-09,58;CL:0000056,9.29e-09,58;CL:0000355,9.29e-09,58;CL:0000393,2.70e-08,61;CL:0000211,2.70e-08,61;CL:0000222,8.01e-08,121;CL:0002596,4.83e-07,2;CL:0002494,8.33e-07,16|ontology_enrichment_development_v019=CL:0005022;4.37e-17;6!CL:0000514;5.45e-08;43|ontology_enrichment_disease=DOID:2394!3.42e-08!14|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004573!6.62e-18!33;UBERON:0004571!6.62e-18!33;UBERON:0001134!4.93e-14!61;UBERON:0002036!4.93e-14!61;UBERON:0003082!4.93e-14!61;UBERON:0002385!1.90e-13!63;UBERON:0001015!1.90e-13!63;UBERON:0000383!1.90e-13!63;UBERON:0000486!2.07e-13!82;UBERON:0001637!2.43e-13!42;UBERON:0003509!2.43e-13!42;UBERON:0004572!2.43e-13!42;UBERON:0004290!3.01e-13!70;UBERON:0004237!2.23e-12!10;UBERON:0004695!2.23e-12!10;UBERON:0002111!2.23e-12!10;UBERON:0004178!2.23e-12!10;UBERON:0000055!3.30e-12!69;UBERON:0000914!9.61e-12!83;UBERON:0002329!9.61e-12!83;UBERON:0003077!9.61e-12!83;UBERON:0003059!9.61e-12!83;UBERON:0007282!9.61e-12!83;UBERON:0009618!9.61e-12!83;UBERON:0007285!9.61e-12!83;UBERON:0004872!1.99e-11!84;UBERON:0002049!4.14e-10!79;UBERON:0007798!4.14e-10!79;UBERON:0004535!7.46e-10!110;UBERON:0001981!1.12e-09!60;UBERON:0007500!1.12e-09!60;UBERON:0004537!1.12e-09!60;UBERON:0006965!1.12e-09!60;UBERON:0001009!1.88e-09!113;UBERON:0000992!7.10e-09!13;UBERON:0002119!1.03e-08!4;UBERON:0004531!1.03e-08!4;UBERON:0002456!1.33e-08!2;UBERON:0001135!5.24e-08!15;UBERON:0002204!1.50e-07!167;UBERON:0001529!2.89e-07!2;UBERON:0007204!2.89e-07!2;UBERON:0003834!3.71e-07!5;UBERON:0001533!3.71e-07!5;UBERON:0000991!6.81e-07!21;UBERON:0009196!6.81e-07!21;UBERON:0009117!6.81e-07!21;UBERON:0005564!6.81e-07!21|ontology_enrichment_uberon_v019=UBERON:0002456;1.50e-23;2!UBERON:0003498;8.12e-16;3!UBERON:0005985;8.12e-16;3!UBERON:0001621;8.12e-16;3!UBERON:0004573;5.35e-15;33!UBERON:0004571;5.35e-15;33!UBERON:0001473;5.71e-13;8!UBERON:0004536;5.71e-13;8!UBERON:0006558;5.71e-13;8!UBERON:0002119;3.55e-12;4!UBERON:0002465;1.72e-10;10!UBERON:0003834;5.32e-10;5!UBERON:0001533;5.32e-10;5!UBERON:0000055;4.43e-09;65!UBERON:0001637;5.56e-09;42!UBERON:0003509;5.56e-09;42!UBERON:0004572;5.56e-09;42!UBERON:0003513;2.19e-07;7!UBERON:0005396;4.82e-07;2!UBERON:0002049;8.93e-07;75!UBERON:0007798;8.93e-07;75|ontology_enrichment_uberon_v019_2=UBERON:0002456,1.78e-23,2;UBERON:0004573,7.06e-16,33;UBERON:0004571,7.06e-16,33;UBERON:0001621,9.09e-16,3;UBERON:0000055,5.73e-15,68;UBERON:0001473,5.26e-13,8;UBERON:0004536,5.26e-13,8;UBERON:0006558,5.26e-13,8;UBERON:0002049,7.00e-13,78;UBERON:0007798,7.00e-13,78;UBERON:0001637,2.42e-12,42;UBERON:0003509,2.42e-12,42;UBERON:0004572,2.42e-12,42;UBERON:0002119,4.57e-12,4;UBERON:0004535,8.77e-11,109;UBERON:0002465,1.62e-10,10;UBERON:0001009,1.88e-10,112;UBERON:0003834,5.69e-10,5;UBERON:0001533,5.69e-10,5;UBERON:0003498,7.77e-10,5;UBERON:0005985,7.77e-10,5;UBERON:0002329,4.11e-09,71;UBERON:0003059,4.11e-09,71;UBERON:0007282,4.11e-09,71;UBERON:0004290,4.11e-09,71;UBERON:0009618,4.11e-09,71;UBERON:0003077,5.66e-09,72;UBERON:0007285,5.66e-09,72;UBERON:0007524,7.74e-09,73;UBERON:0007500,1.34e-08,59;UBERON:0001981,1.34e-08,59;UBERON:0004537,1.34e-08,59;UBERON:0006965,1.34e-08,59;UBERON:0007503,3.27e-08,78;UBERON:0001134,3.77e-08,62;UBERON:0002036,3.77e-08,62;UBERON:0003082,3.77e-08,62;UBERON:0002385,7.12e-08,64;UBERON:0001015,7.12e-08,64;UBERON:0000383,7.12e-08,64;UBERON:0004872,1.11e-07,83;UBERON:0000486,1.16e-07,83;UBERON:0003513,2.30e-07,7;UBERON:0005396,4.83e-07,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,1.20538905604795,0,0.975865597581014,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6024118375565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0.639337125799041,0,0,0,1.45104619314292,1.70215567407342,4.35975574296902,0,0,0,0.60539950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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1432 | |||
|description=CAGE_peak_at_chr17:38172763..38172779,+ | |||
|id=chr17:38172763..38172779,+ | |||
|ontology_enrichment_celltype=CL:0000359!1.42e-18!32;CL:0000680!2.48e-15!57;CL:0000056!2.48e-15!57;CL:0000355!2.48e-15!57;CL:0000192!2.43e-13!42;CL:0000514!2.43e-13!42;CL:0002539!2.23e-12!10;CL:0000187!4.07e-11!54;CL:0000183!7.06e-10!59;CL:0000393!1.18e-09!60;CL:0000211!1.18e-09!60;CL:0002593!1.33e-08!2;CL:0000515!5.06e-08!4;CL:0000222!9.00e-08!119;CL:0002589!2.89e-07!2;CL:0002494!3.69e-07!16;CL:0002595!3.71e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0002593;1.50e-23;2!CL:0000359;4.13e-17;32!CL:0002138;4.37e-17;6!CL:0002592;8.12e-16;3!CL:0002595;5.32e-10;5!CL:0000192;5.45e-08;43!CL:0002596;4.82e-07;2!CL:0002494;8.84e-07;16 | |||
|ontology_enrichment_celltype_v019_2=CL:0002593,1.78e-23,2;CL:0005020,3.91e-17,6;CL:0002138,3.91e-17,6;CL:0005022,3.91e-17,6;CL:0000359,2.16e-16,32;CL:0002592,9.09e-16,3;CL:0000192,4.84e-12,43;CL:0000514,4.84e-12,43;CL:0002595,5.69e-10,5;CL:0000187,2.84e-09,55;CL:0000680,9.29e-09,58;CL:0000056,9.29e-09,58;CL:0000355,9.29e-09,58;CL:0000393,2.70e-08,61;CL:0000211,2.70e-08,61;CL:0000222,8.01e-08,121;CL:0002596,4.83e-07,2;CL:0002494,8.33e-07,16 | |||
|ontology_enrichment_development_v019=CL:0005022;4.37e-17;6!CL:0000514;5.45e-08;43 | |||
|ontology_enrichment_disease=DOID:2394!3.42e-08!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004573!6.62e-18!33;UBERON:0004571!6.62e-18!33;UBERON:0001134!4.93e-14!61;UBERON:0002036!4.93e-14!61;UBERON:0003082!4.93e-14!61;UBERON:0002385!1.90e-13!63;UBERON:0001015!1.90e-13!63;UBERON:0000383!1.90e-13!63;UBERON:0000486!2.07e-13!82;UBERON:0001637!2.43e-13!42;UBERON:0003509!2.43e-13!42;UBERON:0004572!2.43e-13!42;UBERON:0004290!3.01e-13!70;UBERON:0004237!2.23e-12!10;UBERON:0004695!2.23e-12!10;UBERON:0002111!2.23e-12!10;UBERON:0004178!2.23e-12!10;UBERON:0000055!3.30e-12!69;UBERON:0000914!9.61e-12!83;UBERON:0002329!9.61e-12!83;UBERON:0003077!9.61e-12!83;UBERON:0003059!9.61e-12!83;UBERON:0007282!9.61e-12!83;UBERON:0009618!9.61e-12!83;UBERON:0007285!9.61e-12!83;UBERON:0004872!1.99e-11!84;UBERON:0002049!4.14e-10!79;UBERON:0007798!4.14e-10!79;UBERON:0004535!7.46e-10!110;UBERON:0001981!1.12e-09!60;UBERON:0007500!1.12e-09!60;UBERON:0004537!1.12e-09!60;UBERON:0006965!1.12e-09!60;UBERON:0001009!1.88e-09!113;UBERON:0000992!7.10e-09!13;UBERON:0002119!1.03e-08!4;UBERON:0004531!1.03e-08!4;UBERON:0002456!1.33e-08!2;UBERON:0001135!5.24e-08!15;UBERON:0002204!1.50e-07!167;UBERON:0001529!2.89e-07!2;UBERON:0007204!2.89e-07!2;UBERON:0003834!3.71e-07!5;UBERON:0001533!3.71e-07!5;UBERON:0000991!6.81e-07!21;UBERON:0009196!6.81e-07!21;UBERON:0009117!6.81e-07!21;UBERON:0005564!6.81e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0002456;1.50e-23;2!UBERON:0003498;8.12e-16;3!UBERON:0005985;8.12e-16;3!UBERON:0001621;8.12e-16;3!UBERON:0004573;5.35e-15;33!UBERON:0004571;5.35e-15;33!UBERON:0001473;5.71e-13;8!UBERON:0004536;5.71e-13;8!UBERON:0006558;5.71e-13;8!UBERON:0002119;3.55e-12;4!UBERON:0002465;1.72e-10;10!UBERON:0003834;5.32e-10;5!UBERON:0001533;5.32e-10;5!UBERON:0000055;4.43e-09;65!UBERON:0001637;5.56e-09;42!UBERON:0003509;5.56e-09;42!UBERON:0004572;5.56e-09;42!UBERON:0003513;2.19e-07;7!UBERON:0005396;4.82e-07;2!UBERON:0002049;8.93e-07;75!UBERON:0007798;8.93e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002456,1.78e-23,2;UBERON:0004573,7.06e-16,33;UBERON:0004571,7.06e-16,33;UBERON:0001621,9.09e-16,3;UBERON:0000055,5.73e-15,68;UBERON:0001473,5.26e-13,8;UBERON:0004536,5.26e-13,8;UBERON:0006558,5.26e-13,8;UBERON:0002049,7.00e-13,78;UBERON:0007798,7.00e-13,78;UBERON:0001637,2.42e-12,42;UBERON:0003509,2.42e-12,42;UBERON:0004572,2.42e-12,42;UBERON:0002119,4.57e-12,4;UBERON:0004535,8.77e-11,109;UBERON:0002465,1.62e-10,10;UBERON:0001009,1.88e-10,112;UBERON:0003834,5.69e-10,5;UBERON:0001533,5.69e-10,5;UBERON:0003498,7.77e-10,5;UBERON:0005985,7.77e-10,5;UBERON:0002329,4.11e-09,71;UBERON:0003059,4.11e-09,71;UBERON:0007282,4.11e-09,71;UBERON:0004290,4.11e-09,71;UBERON:0009618,4.11e-09,71;UBERON:0003077,5.66e-09,72;UBERON:0007285,5.66e-09,72;UBERON:0007524,7.74e-09,73;UBERON:0007500,1.34e-08,59;UBERON:0001981,1.34e-08,59;UBERON:0004537,1.34e-08,59;UBERON:0006965,1.34e-08,59;UBERON:0007503,3.27e-08,78;UBERON:0001134,3.77e-08,62;UBERON:0002036,3.77e-08,62;UBERON:0003082,3.77e-08,62;UBERON:0002385,7.12e-08,64;UBERON:0001015,7.12e-08,64;UBERON:0000383,7.12e-08,64;UBERON:0004872,1.11e-07,83;UBERON:0000486,1.16e-07,83;UBERON:0003513,2.30e-07,7;UBERON:0005396,4.83e-07,2 | |||
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|short_description=p@chr17:38172763..38172779,+ | |||
}} |
Revision as of 13:21, 11 September 2013
Short description: | p@chr17:38172763..38172779, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:38172763..38172779, + |
Coexpression cluster: | C1432_mesenchymal_Smooth_Lymphatic_Preadipocyte_Sebocyte_CD14_anaplastic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the internal thoracic artery | 1.78e-23 | 2 |
lymphangioblast | 3.91e-17 | 6 |
endothelial cell of lymphatic vessel | 3.91e-17 | 6 |
vascular lymphangioblast | 3.91e-17 | 6 |
vascular associated smooth muscle cell | 2.16e-16 | 32 |
smooth muscle cell of the coronary artery | 9.09e-16 | 3 |
smooth muscle cell | 4.84e-12 | 43 |
smooth muscle myoblast | 4.84e-12 | 43 |
smooth muscle cell of the subclavian artery | 5.69e-10 | 5 |
muscle cell | 2.84e-09 | 55 |
muscle precursor cell | 9.29e-09 | 58 |
myoblast | 9.29e-09 | 58 |
multi-potent skeletal muscle stem cell | 9.29e-09 | 58 |
electrically responsive cell | 2.70e-08 | 61 |
electrically active cell | 2.70e-08 | 61 |
mesodermal cell | 8.01e-08 | 121 |
smooth muscle cell of the carotid artery | 4.83e-07 | 2 |
cardiocyte | 8.33e-07 | 16 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.