FFCP PHASE1:Hg19::chr17:45286488..45286491,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4635|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=7585|TSSclassifier=S|UniProt=P12829|association_with_transcript=60bp_to_ENST00000354968,NM_001002841,uc002ilg.2_5end|coexpression_cluster_id=C3644|description=CAGE_peak_4_at_MYL4_5end|id=chr17:45286488..45286491,+|ontology_enrichment_celltype=CL:0000188!8.22e-16!9;CL:0000764!1.38e-13!2;CL:0000765!1.38e-13!2;CL:0000050!1.38e-13!2;CL:0000038!1.38e-13!2;CL:0000558!1.38e-13!2;CL:0000547!1.38e-13!2;CL:0000549!1.38e-13!2;CL:0000550!1.38e-13!2;CL:0000552!1.38e-13!2;CL:0000594!1.75e-08!3|ontology_enrichment_celltype_v019=CL:0000764;5.51e-34;2!CL:0000558;5.51e-34;2!CL:0000632;9.11e-07;3|ontology_enrichment_celltype_v019_2=CL:0000764,3.06e-34,2;CL:0000765,3.06e-34,2;CL:0000050,3.06e-34,2;CL:0000038,3.06e-34,2;CL:0000558,3.06e-34,2;CL:0000547,3.06e-34,2;CL:0000549,3.06e-34,2;CL:0000550,3.06e-34,2;CL:0000552,3.06e-34,2;CL:0000632,8.15e-07,3|ontology_enrichment_development_v019=UBERON:0010227;2.66e-18;1!UBERON:0004140;1.03e-17;1|ontology_enrichment_disease=DOID:1036!2.18e-18!8;DOID:8692!4.37e-11!31;DOID:1240!1.43e-08!39;DOID:8552!3.21e-07!1|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001905!4.15e-13!2;UBERON:0002757!4.15e-13!2;UBERON:0010134!4.15e-13!2;UBERON:0002784!4.15e-13!2;UBERON:0005408!4.15e-13!2;UBERON:0001899!4.15e-13!2;UBERON:0003978!4.99e-09!3;UBERON:0009751!4.99e-09!3;UBERON:0000946!4.99e-09!3;UBERON:0002523!4.99e-09!3;UBERON:0005983!4.99e-09!3;UBERON:0002165!4.99e-09!3;UBERON:0002062!4.99e-09!3;UBERON:0007280!4.99e-09!3;UBERON:0002079!9.91e-08!1;UBERON:0002135!1.27e-07!1;UBERON:0002146!3.62e-07!1;UBERON:0005623!3.62e-07!1;UBERON:0003296!5.69e-07!4;UBERON:0010133!5.69e-07!4|ontology_enrichment_uberon_v019=UBERON:0002079;2.66e-18;1!UBERON:0002135;4.08e-18;1!UBERON:0002081;7.98e-10;2!UBERON:0002133;9.87e-10;2!UBERON:0001905;1.57e-09;2!UBERON:0002757;1.57e-09;2!UBERON:0010134;1.57e-09;2!UBERON:0005408;1.57e-09;2!UBERON:0001899;1.57e-09;2!UBERON:0000948;1.92e-07;22!UBERON:0004151;5.80e-07;3!UBERON:0003978;6.69e-07;3!UBERON:0000946;6.69e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0002079,2.66e-18,1;UBERON:0002135,5.26e-18,1;UBERON:0002081,7.98e-10,2;UBERON:0010227,7.98e-10,2;UBERON:0002133,1.12e-09,2;UBERON:0001905,2.02e-09,2;UBERON:0002757,2.02e-09,2;UBERON:0010134,2.02e-09,2;UBERON:0005408,2.02e-09,2;UBERON:0001899,2.02e-09,2;UBERON:0004151,5.80e-07,3;UBERON:0003978,7.28e-07,3;UBERON:0009751,7.28e-07,3;UBERON:0000946,7.28e-07,3;UBERON:0002523,7.28e-07,3;UBERON:0005983,7.28e-07,3;UBERON:0002165,7.28e-07,3;UBERON:0002062,7.28e-07,3;UBERON:0007280,7.28e-07,3;UBERON:0000948,7.32e-07,24;UBERON:0005498,7.32e-07,24;UBERON:0004140,7.32e-07,24;UBERON:0009881,7.32e-07,24;UBERON:0004141,7.32e-07,24;UBERON:0003084,7.32e-07,24;UBERON:0007005,7.32e-07,24;UBERON:0004139,7.32e-07,24;UBERON:0004291,7.32e-07,24|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.41185864310528,1.5686127061494,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0.137836572484531,0,0.145016693914229,0.0852266274161009,1.33548053470106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,1.4098700508785,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332423363800313,0.225595660617181,1.17637520590644,0.671286347903371,0.37950746544837,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.23425921017803,0.229160424011684,0,0,0,0,1.41085292222125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.00286728461357,0,0,0,0,0,0,0,0,0,0,2.65013777824443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535701835878287,1.00885116665647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3196288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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=4635 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7585 | |||
|TSSclassifier=S | |||
|UniProt=P12829 | |||
|association_with_transcript=60bp_to_ENST00000354968,NM_001002841,uc002ilg.2_5end | |||
|coexpression_cluster_id=C3644 | |||
|description=CAGE_peak_4_at_MYL4_5end | |||
|id=chr17:45286488..45286491,+ | |||
|ontology_enrichment_celltype=CL:0000188!8.22e-16!9;CL:0000764!1.38e-13!2;CL:0000765!1.38e-13!2;CL:0000050!1.38e-13!2;CL:0000038!1.38e-13!2;CL:0000558!1.38e-13!2;CL:0000547!1.38e-13!2;CL:0000549!1.38e-13!2;CL:0000550!1.38e-13!2;CL:0000552!1.38e-13!2;CL:0000594!1.75e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0000764;5.51e-34;2!CL:0000558;5.51e-34;2!CL:0000632;9.11e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,3.06e-34,2;CL:0000765,3.06e-34,2;CL:0000050,3.06e-34,2;CL:0000038,3.06e-34,2;CL:0000558,3.06e-34,2;CL:0000547,3.06e-34,2;CL:0000549,3.06e-34,2;CL:0000550,3.06e-34,2;CL:0000552,3.06e-34,2;CL:0000632,8.15e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0010227;2.66e-18;1!UBERON:0004140;1.03e-17;1 | |||
|ontology_enrichment_disease=DOID:1036!2.18e-18!8;DOID:8692!4.37e-11!31;DOID:1240!1.43e-08!39;DOID:8552!3.21e-07!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001905!4.15e-13!2;UBERON:0002757!4.15e-13!2;UBERON:0010134!4.15e-13!2;UBERON:0002784!4.15e-13!2;UBERON:0005408!4.15e-13!2;UBERON:0001899!4.15e-13!2;UBERON:0003978!4.99e-09!3;UBERON:0009751!4.99e-09!3;UBERON:0000946!4.99e-09!3;UBERON:0002523!4.99e-09!3;UBERON:0005983!4.99e-09!3;UBERON:0002165!4.99e-09!3;UBERON:0002062!4.99e-09!3;UBERON:0007280!4.99e-09!3;UBERON:0002079!9.91e-08!1;UBERON:0002135!1.27e-07!1;UBERON:0002146!3.62e-07!1;UBERON:0005623!3.62e-07!1;UBERON:0003296!5.69e-07!4;UBERON:0010133!5.69e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0002079;2.66e-18;1!UBERON:0002135;4.08e-18;1!UBERON:0002081;7.98e-10;2!UBERON:0002133;9.87e-10;2!UBERON:0001905;1.57e-09;2!UBERON:0002757;1.57e-09;2!UBERON:0010134;1.57e-09;2!UBERON:0005408;1.57e-09;2!UBERON:0001899;1.57e-09;2!UBERON:0000948;1.92e-07;22!UBERON:0004151;5.80e-07;3!UBERON:0003978;6.69e-07;3!UBERON:0000946;6.69e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002079,2.66e-18,1;UBERON:0002135,5.26e-18,1;UBERON:0002081,7.98e-10,2;UBERON:0010227,7.98e-10,2;UBERON:0002133,1.12e-09,2;UBERON:0001905,2.02e-09,2;UBERON:0002757,2.02e-09,2;UBERON:0010134,2.02e-09,2;UBERON:0005408,2.02e-09,2;UBERON:0001899,2.02e-09,2;UBERON:0004151,5.80e-07,3;UBERON:0003978,7.28e-07,3;UBERON:0009751,7.28e-07,3;UBERON:0000946,7.28e-07,3;UBERON:0002523,7.28e-07,3;UBERON:0005983,7.28e-07,3;UBERON:0002165,7.28e-07,3;UBERON:0002062,7.28e-07,3;UBERON:0007280,7.28e-07,3;UBERON:0000948,7.32e-07,24;UBERON:0005498,7.32e-07,24;UBERON:0004140,7.32e-07,24;UBERON:0009881,7.32e-07,24;UBERON:0004141,7.32e-07,24;UBERON:0003084,7.32e-07,24;UBERON:0007005,7.32e-07,24;UBERON:0004139,7.32e-07,24;UBERON:0004291,7.32e-07,24 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.41185864310528,1.5686127061494,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0.137836572484531,0,0.145016693914229,0.0852266274161009,1.33548053470106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,1.4098700508785,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332423363800313,0.225595660617181,1.17637520590644,0.671286347903371,0.37950746544837,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.23425921017803,0.229160424011684,0,0,0,0,1.41085292222125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.00286728461357,0,0,0,0,0,0,0,0,0,0,2.65013777824443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535701835878287,1.00885116665647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3196288626764,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0,0.193373663920732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0.0757786982182394,0,0,0,0,0.714193294391221,0,0,0,0,0,0,0.342233301085281,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@MYL4 | |||
}} |
Revision as of 14:08, 11 September 2013
Short description: | p4@MYL4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_MYL4_5end |
Coexpression cluster: | C3644_skeletal_left_Skeletal_heart_Reticulocytes_Pericytes_pineal |
Association with transcript: | 60bp_to_ENST00000354968, NM_001002841, uc002ilg.2_5end |
EntrezGene: | MYL4 |
HGNC: | 7585 |
UniProt: | P12829 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 3.06e-34 | 2 |
erythroblast | 3.06e-34 | 2 |
megakaryocyte-erythroid progenitor cell | 3.06e-34 | 2 |
erythroid progenitor cell | 3.06e-34 | 2 |
reticulocyte | 3.06e-34 | 2 |
proerythroblast | 3.06e-34 | 2 |
basophilic erythroblast | 3.06e-34 | 2 |
polychromatophilic erythroblast | 3.06e-34 | 2 |
orthochromatic erythroblast | 3.06e-34 | 2 |
hepatic stellate cell | 8.15e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
left cardiac atrium | 2.66e-18 | 1 |
mitral valve | 5.26e-18 | 1 |
cardiac atrium | 7.98e-10 | 2 |
future cardiac atrium | 7.98e-10 | 2 |
atrioventricular valve | 1.12e-09 | 2 |
pineal body | 2.02e-09 | 2 |
regional part of epithalamus | 2.02e-09 | 2 |
secretory circumventricular organ | 2.02e-09 | 2 |
circumventricular organ | 2.02e-09 | 2 |
epithalamus | 2.02e-09 | 2 |
cardiac chamber | 5.80e-07 | 3 |
valve | 7.28e-07 | 3 |
cardiac mesenchyme | 7.28e-07 | 3 |
cardial valve | 7.28e-07 | 3 |
tunica intima | 7.28e-07 | 3 |
heart layer | 7.28e-07 | 3 |
endocardium | 7.28e-07 | 3 |
endocardial cushion | 7.28e-07 | 3 |
presumptive endocardium | 7.28e-07 | 3 |
heart | 7.32e-07 | 24 |
primitive heart tube | 7.32e-07 | 24 |
primary heart field | 7.32e-07 | 24 |
anterior lateral plate mesoderm | 7.32e-07 | 24 |
heart tube | 7.32e-07 | 24 |
heart primordium | 7.32e-07 | 24 |
cardiac mesoderm | 7.32e-07 | 24 |
cardiogenic plate | 7.32e-07 | 24 |
heart rudiment | 7.32e-07 | 24 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.