FFCP PHASE1:Hg19::chr18:11851475..11851478,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=57132|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=24287|TSSclassifier=S|UniProt=|association_with_transcript=36bp_to_ENST00000526991_5end|description=CAGE_peak_4_at_CHMP1B_5end|id=chr18:11851475..11851478,+|ontology_enrichment_celltype=CL:0000860!6.70e-29!45;CL:0002057!6.56e-28!42;CL:0000766!3.31e-20!76;CL:0000557!5.37e-20!71;CL:0002009!8.38e-19!65;CL:0000839!5.33e-18!70;CL:0002194!2.13e-17!63;CL:0000576!2.13e-17!63;CL:0000040!2.13e-17!63;CL:0000559!2.13e-17!63;CL:0000738!2.39e-14!140;CL:0002031!1.34e-11!124;CL:0002087!7.20e-11!119;CL:0000763!1.17e-09!112;CL:0000049!1.17e-09!112;CL:0000037!4.75e-08!172;CL:0000566!4.75e-08!172;CL:0000988!4.77e-07!182|ontology_enrichment_celltype_v019=CL:0000860;3.16e-34;33!CL:0002057;3.16e-34;33!CL:0000576;3.51e-24;48!CL:0000473;3.43e-22;39!CL:0000234;3.43e-22;39!CL:0000766;1.09e-16;69!CL:0002087;1.88e-11;104!CL:0000569;1.21e-08;4!CL:0002393;6.34e-08;6!CL:0002397;6.34e-08;6!CL:0000738;1.05e-07;136!CL:0000767;4.95e-07;3!CL:0000763;5.53e-07;100|ontology_enrichment_celltype_v019_2=CL:0000860,1.44e-45,42;CL:0002057,1.44e-45,42;CL:0000473,1.99e-38,48;CL:0000234,1.99e-38,48;CL:0002009,2.42e-33,61;CL:0000766,4.11e-33,72;CL:0000738,4.52e-33,136;CL:0000557,1.13e-32,67;CL:0002194,2.64e-30,59;CL:0000576,2.64e-30,59;CL:0000040,2.64e-30,59;CL:0000559,2.64e-30,59;CL:0000839,4.08e-29,66;CL:0002087,6.54e-28,115;CL:0002031,2.77e-27,120;CL:0000037,1.89e-23,168;CL:0000988,2.16e-21,177;CL:0002032,1.20e-20,161;CL:0000837,1.20e-20,161;CL:0000763,1.32e-20,108;CL:0000049,1.32e-20,108;CL:0002320,5.17e-19,361;CL:0000134,3.21e-18,354;CL:0000219,5.68e-16,386;CL:0000034,9.53e-14,441;CL:0000048,1.51e-13,427;CL:0000723,4.86e-13,433;CL:0002393,4.21e-09,9;CL:0002397,4.21e-09,9;CL:0000569,1.43e-08,4;CL:0000011,1.43e-08,4;CL:0000767,5.24e-07,3|ontology_enrichment_development_v019=CL:0002057;1.13e-32;42!CL:0000011;1.21e-08;4|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!6.76e-20!80;UBERON:0001474!2.52e-18!86;UBERON:0002390!2.52e-17!102;UBERON:0003061!2.52e-17!102;UBERON:0004765!5.98e-17!101;UBERON:0001434!5.98e-17!101;UBERON:0002193!8.67e-14!112;UBERON:0002405!6.83e-12!115;UBERON:0002204!8.44e-08!167|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.23e-31,76;UBERON:0001474,1.53e-29,82;UBERON:0004765,5.61e-29,90;UBERON:0002390,7.72e-27,98;UBERON:0003061,7.72e-27,98;UBERON:0001434,3.36e-26,100;UBERON:0002405,2.67e-24,93;UBERON:0002193,4.23e-23,108;UBERON:0002384,1.25e-18,371;UBERON:0002204,2.87e-15,167;UBERON:0003081,6.28e-13,203;UBERON:0000926,5.61e-08,315;UBERON:0004120,5.61e-08,315;UBERON:0006603,5.61e-08,315|phase1_expression=0,0,0.140954404095971,0,0.893922188854576,0,0,0,0,0,0,0,0,2.97039247104112,2.98257638155124,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,5.50709987588466,4.22212337906934,5.26374819274658,0,0.30120591877825,0,0,0,0.293600439334847,3.32397245119126,4.61252229181326,5.4252717678963,0,0,0,1.16318591023652,0.755751887377619,0.242584061187816,1.39457422143411,2.46700732813095,5.57471467611186,3.16461631554365,1.5369642391746,2.83778675866302,4.48169384957604,7.10033151942209,5.41705946377367,4.89430082810772,6.00393530127261,4.71919317334678,10.7129362329816,9.30694178520671,10.2293940127847,0.989553900560148,1.39624560335142,0.852449501065388,4.64334781805734,1.70215567407342,2.4912889959823,2.51248665256743,4.69334626578181,1.95469960234605,1.21079900526674,2.20966581592539,1.58231193720442,0.845021145247767,2.12604299965044,1.46761051855863,2.02191536063691,2.55300717830561,0.48217676009124,0.285012743741249,1.39241674039363,1.46131323011707,0,0,0,0,0,0,0,0,2.27685187643779,2.34894875748376,2.29363936875137,9.25199300053181,3.92355994087075,0,1.180258620683,1.96505381374582,1.02800749499755,0,0.977766799900771,0.946895611469467,0,0,0.294605907474837,0.221533894583621,0.270803863765016,0,0,0,0,0,0.741432815810302,0.535081656179426,0,0,1.14966148080576,0.34362744548263,0.506039384039006,0,0,0,0,0,0,0,0,1.81446068902259,1.60464117470104,1.73789284659359,0,0,0.12786256184353,1.80719576192283,2.00535164254356,4.92478164466801,0,0.486634870302636,0,0,0.263504357079378,0.130979075497713,0,0,0,0.174129737299267,0,0.953962497221368,2.28797964312051,0.74291500265913,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,1.31780417436063,0,0,0.496971951695318,0.12663051166458,0.397227542439656,2.29469296599051,0.354668382198357,0,0,0,0,0,0,0.454072282934794,1.15235184896,0,0,0,0.298897361103602,0,0,0,0,0,0.206651562351531,0,0,0,0,0,0,0,0,0,0.751190294532984,0.340296549480063,1.25572744982203,0,0,0.600182192168805,0.103052529238439,0.515281080091258,0,0.168776332241266,0,0,0,0,1.77504796258307,0,0,0.193260853163297,0,0,0,0.132529768321485,0,0.10366105501537,0,0,0,0,0,0,0.721879481669586,0.354920400119532,0.505754070234305,0.241011029883482,0.55146986366197,0.653638332277218,0.237270619111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995861895,0.426467963801962,0,0.387533459016037,0.496597714366863,0.224263725161227,0.0636471582781649,3.23387502333151,0.870866991587845,0.342233301085281,0.0673520530145875,0.502055437748735,0,0,2.45472895518746,1.9307228228694,0.0898252021065869,0,0,0,0,0.201273793591026,0|short_description=p4@CHMP1B}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=57132 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24287 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=36bp_to_ENST00000526991_5end | |||
|description=CAGE_peak_4_at_CHMP1B_5end | |||
|id=chr18:11851475..11851478,+ | |||
|ontology_enrichment_celltype=CL:0000860!6.70e-29!45;CL:0002057!6.56e-28!42;CL:0000766!3.31e-20!76;CL:0000557!5.37e-20!71;CL:0002009!8.38e-19!65;CL:0000839!5.33e-18!70;CL:0002194!2.13e-17!63;CL:0000576!2.13e-17!63;CL:0000040!2.13e-17!63;CL:0000559!2.13e-17!63;CL:0000738!2.39e-14!140;CL:0002031!1.34e-11!124;CL:0002087!7.20e-11!119;CL:0000763!1.17e-09!112;CL:0000049!1.17e-09!112;CL:0000037!4.75e-08!172;CL:0000566!4.75e-08!172;CL:0000988!4.77e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.16e-34;33!CL:0002057;3.16e-34;33!CL:0000576;3.51e-24;48!CL:0000473;3.43e-22;39!CL:0000234;3.43e-22;39!CL:0000766;1.09e-16;69!CL:0002087;1.88e-11;104!CL:0000569;1.21e-08;4!CL:0002393;6.34e-08;6!CL:0002397;6.34e-08;6!CL:0000738;1.05e-07;136!CL:0000767;4.95e-07;3!CL:0000763;5.53e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.44e-45,42;CL:0002057,1.44e-45,42;CL:0000473,1.99e-38,48;CL:0000234,1.99e-38,48;CL:0002009,2.42e-33,61;CL:0000766,4.11e-33,72;CL:0000738,4.52e-33,136;CL:0000557,1.13e-32,67;CL:0002194,2.64e-30,59;CL:0000576,2.64e-30,59;CL:0000040,2.64e-30,59;CL:0000559,2.64e-30,59;CL:0000839,4.08e-29,66;CL:0002087,6.54e-28,115;CL:0002031,2.77e-27,120;CL:0000037,1.89e-23,168;CL:0000988,2.16e-21,177;CL:0002032,1.20e-20,161;CL:0000837,1.20e-20,161;CL:0000763,1.32e-20,108;CL:0000049,1.32e-20,108;CL:0002320,5.17e-19,361;CL:0000134,3.21e-18,354;CL:0000219,5.68e-16,386;CL:0000034,9.53e-14,441;CL:0000048,1.51e-13,427;CL:0000723,4.86e-13,433;CL:0002393,4.21e-09,9;CL:0002397,4.21e-09,9;CL:0000569,1.43e-08,4;CL:0000011,1.43e-08,4;CL:0000767,5.24e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.13e-32;42!CL:0000011;1.21e-08;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!6.76e-20!80;UBERON:0001474!2.52e-18!86;UBERON:0002390!2.52e-17!102;UBERON:0003061!2.52e-17!102;UBERON:0004765!5.98e-17!101;UBERON:0001434!5.98e-17!101;UBERON:0002193!8.67e-14!112;UBERON:0002405!6.83e-12!115;UBERON:0002204!8.44e-08!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.23e-31,76;UBERON:0001474,1.53e-29,82;UBERON:0004765,5.61e-29,90;UBERON:0002390,7.72e-27,98;UBERON:0003061,7.72e-27,98;UBERON:0001434,3.36e-26,100;UBERON:0002405,2.67e-24,93;UBERON:0002193,4.23e-23,108;UBERON:0002384,1.25e-18,371;UBERON:0002204,2.87e-15,167;UBERON:0003081,6.28e-13,203;UBERON:0000926,5.61e-08,315;UBERON:0004120,5.61e-08,315;UBERON:0006603,5.61e-08,315 | |||
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| |||
|short_description=p4@CHMP1B | |||
}} |
Revision as of 16:51, 11 September 2013
Short description: | p4@CHMP1B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_CHMP1B_5end |
Coexpression cluster: | NA |
Association with transcript: | 36bp_to_ENST00000526991_5end |
EntrezGene: | CHMP1B |
HGNC: | 24287 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.23e-31 | 76 |
bone element | 1.53e-29 | 82 |
skeletal element | 5.61e-29 | 90 |
hematopoietic system | 7.72e-27 | 98 |
blood island | 7.72e-27 | 98 |
skeletal system | 3.36e-26 | 100 |
immune system | 2.67e-24 | 93 |
hemolymphoid system | 4.23e-23 | 108 |
connective tissue | 1.25e-18 | 371 |
musculoskeletal system | 2.87e-15 | 167 |
lateral plate mesoderm | 6.28e-13 | 203 |
mesoderm | 5.61e-08 | 315 |
mesoderm-derived structure | 5.61e-08 | 315 |
presumptive mesoderm | 5.61e-08 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.