FFCP PHASE1:Hg19::chr19:1513576..1513590,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=339366|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=27912|TSSclassifier=W|UniProt=Q6ZMM2,Q0VD77|association_with_transcript=-388bp_to_ENST00000330475,NM_213604,uc002ltd.2,uc010xgq.1_5end|coexpression_cluster_id=C360|description=CAGE_peak_2_at_ADAMTSL5_5end|id=chr19:1513576..1513590,-|ontology_enrichment_celltype=CL:0000057!1.24e-12!75;CL:0000055!1.82e-09!180;CL:0002620!7.80e-07!23|ontology_enrichment_celltype_v019=CL:0000349;1.62e-14;19!CL:0002620;1.40e-13;23!CL:0002577;3.79e-09;3!CL:0002579;2.17e-07;3!CL:0000057;3.25e-07;73|ontology_enrichment_celltype_v019_2=CL:0000057,6.87e-15,76;CL:0000349,8.30e-15,19;CL:0002620,6.06e-14,23;CL:0002577,3.87e-09,3;CL:0002579,2.67e-07,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:17;3.23e-11;5!DOID:450;3.23e-11;5!DOID:66;3.23e-11;5!DOID:423;3.23e-11;5!DOID:0080000;3.23e-11;5!DOID:11722;3.23e-11;5|ontology_enrichment_disease_v019_2=DOID:17,1.87e-11,5;DOID:450,1.87e-11,5;DOID:66,1.87e-11,5;DOID:423,1.87e-11,5;DOID:0080000,1.87e-11,5;DOID:11722,1.87e-11,5|ontology_enrichment_uberon=UBERON:0003102!1.51e-10!95;UBERON:0005631!6.75e-10!14;UBERON:0000158!6.75e-10!14;UBERON:0004923!1.19e-09!57;UBERON:0000478!6.71e-08!24;UBERON:0005156!1.94e-07!59;UBERON:0000990!1.94e-07!59;UBERON:0002097!3.12e-07!40;UBERON:0004119!7.94e-07!169;UBERON:0000925!7.94e-07!169;UBERON:0006595!7.94e-07!169;UBERON:0000062!8.81e-07!511|ontology_enrichment_uberon_v019=UBERON:0005631;4.35e-12;10!UBERON:0000158;4.35e-12;10!UBERON:0002097;7.60e-12;41!UBERON:0000478;6.44e-11;24!UBERON:0002199;6.74e-11;46!UBERON:0002416;6.74e-11;46!UBERON:0000305;1.35e-09;7!UBERON:0003102;3.33e-09;50!UBERON:0001987;6.47e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.71e-17,14;UBERON:0000158,1.71e-17,14;UBERON:0002097,1.12e-15,41;UBERON:0002199,2.00e-13,46;UBERON:0002416,2.00e-13,46;UBERON:0003102,6.87e-13,99;UBERON:0004871,1.39e-11,8;UBERON:0000478,3.86e-11,24;UBERON:0000305,1.29e-09,7;UBERON:0003124,1.62e-09,7;UBERON:0001987,6.57e-07,4;UBERON:0004340,6.57e-07,4;UBERON:0004923,8.36e-07,66|phase1_expression=0.363356758541113,0.642301571672949,0.704772020479856,0,0,0,0,0,0.261185628199839,0.491467873003018,0,2.40285509343189,5.27533956456907,0,0,0.672325146451775,0,2.19093027116212,0.487932798790507,0.123121058076788,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0.30120591877825,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0.361439152384566,0.50133791063589,1.15877215168659,0.795285947051099,0.973269740605272,0,0.221729397462564,0.087834785693126,0.0654895377488563,1.82147644146271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,3.97577561356255,0.886413581652058,0.926864265692532,0.860509862246441,0,3.36406560085384,1.06748995729705,1.2333377420858,0.311211035399766,0.134710672069688,0,0.151357427644931,0,0,0.312160076830321,0,0.298897361103602,0,0.485618833104395,0,0,0.122834317311768,0.206651562351531,2.37600571456411,0,0.910161361938026,0.718618141816238,0,0,0.277064115484183,1.31693286264251,0.30648779579902,0,0.453728732640084,1.61450672119976,1.2813443329114,1.27159140695737,1.80054657650641,1.13357782162283,1.28820270022815,1.11670113798954,1.5189869901714,0.974370051611986,1.7670364197088,1.47279837827679,1.2931684545505,0,1.5112814734146,1.3564847384839,1.35282597214308,0.818238361772504,0.286804595389004,0,0,0,0.10366105501537,0,0,0,0,1.38134921352481,0.464367928031979,0,0.236613600079688,0.842923450390509,0.482022059766964,0.330881918197182,0.435758888184812,0.474541238222193,0.269662616320329,0.196221465125346,0.769494313892781,0,1.40241773803446,0.4115740113314,1.47008711385542,0,0,0,0,0.122988438543114,0.171567810298526,0.878002283269004,2.24803506515239,1.10581869652794,0.462942225792648,0.977424915930974,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,1.87467667973554,2.01578553838631,0.850650583454319,0.179117045405697,0.581267877027924,0.766765358330422,0,0,0,0,0,0.126995788584338,0,0,0,0,0.600686115687835,0.285826432630578,0.224262168690721,0,0.07333828582095,0.517086863031111,0,0,0.531876233169741,0,0,0,0.266422179016099,0.285955987316295,0.542621605391443,0.823240336780769,0,0,0,1.20575750823834,0,1.09970290300263,0,0,0,1.91699884393266,0,0,0.289562613335158,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0.831883446123229,1.07057393278297,1.57702415033935,1.40569697991256,0,0,1.03473071292505,0,1.10621501125022,1.12948698808508,0.195801157462741,0.343143423810856,0,0,0,9.39695471483404,9.98612637062982,17.8410273064511,0.992431231275107,1.53461973288062,1.68396056659844,1.15325234330131,1.02341449813341,1.93024705372329,2.96836132889982,0,0.177561725313127,0.0821271560138091,0,0.116210378459959,1.0877350463246,0.802025881213139,1.4732958229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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=339366 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27912 | |||
|TSSclassifier=W | |||
|UniProt=Q6ZMM2,Q0VD77 | |||
|association_with_transcript=-388bp_to_ENST00000330475,NM_213604,uc002ltd.2,uc010xgq.1_5end | |||
|coexpression_cluster_id=C360 | |||
|description=CAGE_peak_2_at_ADAMTSL5_5end | |||
|id=chr19:1513576..1513590,- | |||
|ontology_enrichment_celltype=CL:0000057!1.24e-12!75;CL:0000055!1.82e-09!180;CL:0002620!7.80e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0000349;1.62e-14;19!CL:0002620;1.40e-13;23!CL:0002577;3.79e-09;3!CL:0002579;2.17e-07;3!CL:0000057;3.25e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,6.87e-15,76;CL:0000349,8.30e-15,19;CL:0002620,6.06e-14,23;CL:0002577,3.87e-09,3;CL:0002579,2.67e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;3.23e-11;5!DOID:450;3.23e-11;5!DOID:66;3.23e-11;5!DOID:423;3.23e-11;5!DOID:0080000;3.23e-11;5!DOID:11722;3.23e-11;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.87e-11,5;DOID:450,1.87e-11,5;DOID:66,1.87e-11,5;DOID:423,1.87e-11,5;DOID:0080000,1.87e-11,5;DOID:11722,1.87e-11,5 | |||
|ontology_enrichment_uberon=UBERON:0003102!1.51e-10!95;UBERON:0005631!6.75e-10!14;UBERON:0000158!6.75e-10!14;UBERON:0004923!1.19e-09!57;UBERON:0000478!6.71e-08!24;UBERON:0005156!1.94e-07!59;UBERON:0000990!1.94e-07!59;UBERON:0002097!3.12e-07!40;UBERON:0004119!7.94e-07!169;UBERON:0000925!7.94e-07!169;UBERON:0006595!7.94e-07!169;UBERON:0000062!8.81e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;4.35e-12;10!UBERON:0000158;4.35e-12;10!UBERON:0002097;7.60e-12;41!UBERON:0000478;6.44e-11;24!UBERON:0002199;6.74e-11;46!UBERON:0002416;6.74e-11;46!UBERON:0000305;1.35e-09;7!UBERON:0003102;3.33e-09;50!UBERON:0001987;6.47e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.71e-17,14;UBERON:0000158,1.71e-17,14;UBERON:0002097,1.12e-15,41;UBERON:0002199,2.00e-13,46;UBERON:0002416,2.00e-13,46;UBERON:0003102,6.87e-13,99;UBERON:0004871,1.39e-11,8;UBERON:0000478,3.86e-11,24;UBERON:0000305,1.29e-09,7;UBERON:0003124,1.62e-09,7;UBERON:0001987,6.57e-07,4;UBERON:0004340,6.57e-07,4;UBERON:0004923,8.36e-07,66 | |||
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| |||
|short_description=p2@ADAMTSL5 | |||
}} |
Revision as of 19:07, 11 September 2013
Short description: | p2@ADAMTSL5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_ADAMTSL5_5end |
Coexpression cluster: | C360_Placental_Amniotic_amniotic_teratocarcinoma_chorionic_neuroblastoma_H9 |
Association with transcript: | -388bp_to_ENST00000330475, NM_213604, uc002ltd.2, uc010xgq.1_5end |
EntrezGene: | ADAMTSL5 |
HGNC: | 27912 |
UniProt: | Q6ZMM2Q0VD77 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 6.87e-15 | 76 |
extraembryonic cell | 8.30e-15 | 19 |
skin fibroblast | 6.06e-14 | 23 |
placental epithelial cell | 3.87e-09 | 3 |
omentum preadipocyte | 2.67e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.71e-17 | 14 |
membranous layer | 1.71e-17 | 14 |
skin of body | 1.12e-15 | 41 |
integument | 2.00e-13 | 46 |
integumental system | 2.00e-13 | 46 |
surface structure | 6.87e-13 | 99 |
somatic layer of lateral plate mesoderm | 1.39e-11 | 8 |
extraembryonic structure | 3.86e-11 | 24 |
amnion | 1.29e-09 | 7 |
chorion | 1.62e-09 | 7 |
placenta | 6.57e-07 | 4 |
allantois | 6.57e-07 | 4 |
organ component layer | 8.36e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.87e-11 | 5 |
myotonic disease | 1.87e-11 | 5 |
muscle tissue disease | 1.87e-11 | 5 |
myopathy | 1.87e-11 | 5 |
muscular disease | 1.87e-11 | 5 |
myotonic dystrophy | 1.87e-11 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.