FFCP PHASE1:Hg19::chr3:71113153..71113163,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C741|description=CAGE_peak_at_chr3:71113153..71113163,+|id=chr3:71113153..71113163,+|ontology_enrichment_celltype=CL:0000738!1.62e-32!140;CL:0002057!1.05e-28!42;CL:0000860!2.11e-26!45;CL:0002031!2.44e-25!124;CL:0000037!2.03e-24!172;CL:0000566!2.03e-24!172;CL:0000988!8.27e-24!182;CL:0000557!1.57e-23!71;CL:0000766!3.35e-23!76;CL:0002032!4.79e-23!165;CL:0000837!4.79e-23!165;CL:0002087!1.17e-21!119;CL:0002009!4.33e-20!65;CL:0000839!8.82e-20!70;CL:0000763!5.23e-19!112;CL:0000049!5.23e-19!112;CL:0002194!7.30e-17!63;CL:0000576!7.30e-17!63;CL:0000040!7.30e-17!63;CL:0000559!7.30e-17!63;CL:0000453!2.25e-10!5;CL:0002320!3.72e-10!365;CL:0000134!6.48e-10!358;CL:0000623!1.18e-09!3;CL:0000825!1.18e-09!3;CL:0000034!1.23e-08!444;CL:0000219!4.63e-08!390;CL:0000048!5.29e-08!430;CL:0001014!5.31e-08!2;CL:0001016!5.31e-08!2;CL:0000723!9.96e-08!436|ontology_enrichment_celltype_v019=CL:0001014;5.57e-25;2!CL:0001016;5.57e-25;2!CL:0000860;2.06e-24;33!CL:0002057;2.06e-24;33!CL:0000576;4.14e-19;48!CL:0000473;5.71e-19;39!CL:0000234;5.71e-19;39!CL:0002393;2.13e-18;6!CL:0002397;2.13e-18;6!CL:0000766;1.66e-15;69!CL:0000453;1.40e-10;5!CL:0000840;5.78e-09;5!CL:0002087;6.10e-09;104|ontology_enrichment_celltype_v019_2=CL:0000860,1.52e-38,42;CL:0002057,1.52e-38,42;CL:0002009,2.49e-35,61;CL:0000473,1.50e-33,48;CL:0000234,1.50e-33,48;CL:0000557,4.57e-32,67;CL:0002194,1.50e-26,59;CL:0000576,1.50e-26,59;CL:0000040,1.50e-26,59;CL:0000559,1.50e-26,59;CL:0001014,5.58e-25,2;CL:0001016,5.58e-25,2;CL:0000839,1.28e-23,66;CL:0000766,1.48e-21,72;CL:0002031,5.89e-20,120;CL:0000763,2.36e-19,108;CL:0000049,2.36e-19,108;CL:0000738,2.09e-17,136;CL:0002087,2.38e-15,115;CL:0002032,2.01e-14,161;CL:0000837,2.01e-14,161;CL:0000037,9.56e-14,168;CL:0000988,5.95e-13,177;CL:0002393,2.32e-12,9;CL:0002397,2.32e-12,9;CL:0000453,1.40e-10,5;CL:0000840,5.79e-09,5;CL:0001029,5.79e-09,5|ontology_enrichment_development_v019=CL:0002057;1.25e-29;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!3.99e-20!80;UBERON:0002193!5.27e-19!112;UBERON:0002390!1.45e-18!102;UBERON:0003061!1.45e-18!102;UBERON:0001474!2.98e-18!86;UBERON:0002405!1.68e-15!115;UBERON:0004765!1.49e-14!101;UBERON:0001434!1.49e-14!101;UBERON:0002384!1.43e-09!375|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.02e-28,76;UBERON:0001474,5.76e-26,82;UBERON:0004765,1.57e-23,90;UBERON:0002405,1.00e-22,93;UBERON:0002390,1.73e-21,98;UBERON:0003061,1.73e-21,98;UBERON:0001434,5.00e-21,100;UBERON:0002193,2.36e-19,108;UBERON:0002204,6.58e-12,167;UBERON:0003081,1.82e-09,203|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0.309632246632152,0,0,0,0,0,0,1.10799081706375,2.00544447470142,6.07630438004385,0,0,0,0,0,0,0,0,0,0,0,0.47296445977717,1.72372840368309,1.93645405075148,1.35426486594342,0,0,0,0.306083892370903,0.641858054152187,0.639337125799041,0,0,0,1.7412554317715,1.70215567407342,1.24564449799115,0,0.521482918420201,0.217188844705117,2.42159801053347,2.94622108790052,3.79754864929061,0,0,0.419317291016752,0.112328631146495,0.150176892841506,0,0,0,0,0,0,0.889509253863555,0,0.400395987036012,0,0,0,0,0,1.14681968437569,1.32171328579026,1.12101712596307,0,0.590129310341499,0.393010762749165,0.205601498999509,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0.367663080345869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414656231081544,0.720599767084807,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.431255149719035,0.256686072559497,0,0,0,0,0,0,0,0.414415513436035,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.431428401637234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,0,0,0,0.1607531484650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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C741 | |||
|description=CAGE_peak_at_chr3:71113153..71113163,+ | |||
|id=chr3:71113153..71113163,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.62e-32!140;CL:0002057!1.05e-28!42;CL:0000860!2.11e-26!45;CL:0002031!2.44e-25!124;CL:0000037!2.03e-24!172;CL:0000566!2.03e-24!172;CL:0000988!8.27e-24!182;CL:0000557!1.57e-23!71;CL:0000766!3.35e-23!76;CL:0002032!4.79e-23!165;CL:0000837!4.79e-23!165;CL:0002087!1.17e-21!119;CL:0002009!4.33e-20!65;CL:0000839!8.82e-20!70;CL:0000763!5.23e-19!112;CL:0000049!5.23e-19!112;CL:0002194!7.30e-17!63;CL:0000576!7.30e-17!63;CL:0000040!7.30e-17!63;CL:0000559!7.30e-17!63;CL:0000453!2.25e-10!5;CL:0002320!3.72e-10!365;CL:0000134!6.48e-10!358;CL:0000623!1.18e-09!3;CL:0000825!1.18e-09!3;CL:0000034!1.23e-08!444;CL:0000219!4.63e-08!390;CL:0000048!5.29e-08!430;CL:0001014!5.31e-08!2;CL:0001016!5.31e-08!2;CL:0000723!9.96e-08!436 | |||
|ontology_enrichment_celltype_v019=CL:0001014;5.57e-25;2!CL:0001016;5.57e-25;2!CL:0000860;2.06e-24;33!CL:0002057;2.06e-24;33!CL:0000576;4.14e-19;48!CL:0000473;5.71e-19;39!CL:0000234;5.71e-19;39!CL:0002393;2.13e-18;6!CL:0002397;2.13e-18;6!CL:0000766;1.66e-15;69!CL:0000453;1.40e-10;5!CL:0000840;5.78e-09;5!CL:0002087;6.10e-09;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.52e-38,42;CL:0002057,1.52e-38,42;CL:0002009,2.49e-35,61;CL:0000473,1.50e-33,48;CL:0000234,1.50e-33,48;CL:0000557,4.57e-32,67;CL:0002194,1.50e-26,59;CL:0000576,1.50e-26,59;CL:0000040,1.50e-26,59;CL:0000559,1.50e-26,59;CL:0001014,5.58e-25,2;CL:0001016,5.58e-25,2;CL:0000839,1.28e-23,66;CL:0000766,1.48e-21,72;CL:0002031,5.89e-20,120;CL:0000763,2.36e-19,108;CL:0000049,2.36e-19,108;CL:0000738,2.09e-17,136;CL:0002087,2.38e-15,115;CL:0002032,2.01e-14,161;CL:0000837,2.01e-14,161;CL:0000037,9.56e-14,168;CL:0000988,5.95e-13,177;CL:0002393,2.32e-12,9;CL:0002397,2.32e-12,9;CL:0000453,1.40e-10,5;CL:0000840,5.79e-09,5;CL:0001029,5.79e-09,5 | |||
|ontology_enrichment_development_v019=CL:0002057;1.25e-29;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.99e-20!80;UBERON:0002193!5.27e-19!112;UBERON:0002390!1.45e-18!102;UBERON:0003061!1.45e-18!102;UBERON:0001474!2.98e-18!86;UBERON:0002405!1.68e-15!115;UBERON:0004765!1.49e-14!101;UBERON:0001434!1.49e-14!101;UBERON:0002384!1.43e-09!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.02e-28,76;UBERON:0001474,5.76e-26,82;UBERON:0004765,1.57e-23,90;UBERON:0002405,1.00e-22,93;UBERON:0002390,1.73e-21,98;UBERON:0003061,1.73e-21,98;UBERON:0001434,5.00e-21,100;UBERON:0002193,2.36e-19,108;UBERON:0002204,6.58e-12,167;UBERON:0003081,1.82e-09,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0.309632246632152,0,0,0,0,0,0,1.10799081706375,2.00544447470142,6.07630438004385,0,0,0,0,0,0,0,0,0,0,0,0.47296445977717,1.72372840368309,1.93645405075148,1.35426486594342,0,0,0,0.306083892370903,0.641858054152187,0.639337125799041,0,0,0,1.7412554317715,1.70215567407342,1.24564449799115,0,0.521482918420201,0.217188844705117,2.42159801053347,2.94622108790052,3.79754864929061,0,0,0.419317291016752,0.112328631146495,0.150176892841506,0,0,0,0,0,0,0.889509253863555,0,0.400395987036012,0,0,0,0,0,1.14681968437569,1.32171328579026,1.12101712596307,0,0.590129310341499,0.393010762749165,0.205601498999509,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0.367663080345869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414656231081544,0.720599767084807,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.431255149719035,0.256686072559497,0,0,0,0,0,0,0,0.414415513436035,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.431428401637234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,0,0,0,0.160753148465019,0,0,2.0247650239635,6.1904156364636,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0,0.194860308839388,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr3:71113153..71113163,+ | |||
}} |
Revision as of 01:17, 13 September 2013
Short description: | p@chr3:71113153..71113163, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:71113153..71113163, + |
Coexpression cluster: | C741_immature_CD14_Basophils_Peripheral_Mallassezderived_Astrocyte_renal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.02e-28 | 76 |
bone element | 5.76e-26 | 82 |
skeletal element | 1.57e-23 | 90 |
immune system | 1.00e-22 | 93 |
hematopoietic system | 1.73e-21 | 98 |
blood island | 1.73e-21 | 98 |
skeletal system | 5.00e-21 | 100 |
hemolymphoid system | 2.36e-19 | 108 |
musculoskeletal system | 6.58e-12 | 167 |
lateral plate mesoderm | 1.82e-09 | 203 |
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