FFCP PHASE1:Hg19::chr3:152879985..152880038,+: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5912 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9862 | |||
|TSSclassifier=S | |||
|UniProt=P61225,Q5JQ44 | |||
|association_with_transcript=0bp_to_ENST00000323534,NM_002886,uc003ezr.2_5end | |||
|coexpression_cluster_id=C4296 | |||
|description=CAGE_peak_1_at_RAP2B_5end | |||
|id=chr3:152879985..152880038,+ | |||
|ontology_enrichment_celltype=CL:0000003!3.51e-27!722;CL:0002057!1.02e-25!42;CL:0000144!3.33e-25!625;CL:0002009!5.33e-25!65;CL:0000557!7.58e-25!71;CL:0002371!9.41e-25!591;CL:0000839!1.99e-24!70;CL:0000012!4.27e-24!682;CL:0002194!5.37e-24!63;CL:0000576!5.37e-24!63;CL:0000040!5.37e-24!63;CL:0000559!5.37e-24!63;CL:0000063!8.47e-24!578;CL:0000766!4.00e-23!76;CL:0000548!1.02e-22!679;CL:0000004!1.02e-22!679;CL:0000255!1.02e-22!679;CL:0000738!1.91e-22!140;CL:0000860!5.17e-22!45;CL:0002031!2.08e-21!124;CL:0000763!3.29e-21!112;CL:0000049!3.29e-21!112;CL:0000037!4.89e-21!172;CL:0000566!4.89e-21!172;CL:0000988!2.01e-20!182;CL:0002087!4.50e-20!119;CL:0002032!6.92e-20!165;CL:0000837!6.92e-20!165;CL:0000034!4.21e-08!444;CL:0002320!8.72e-08!365;CL:0000115!1.49e-07!35;CL:0000134!1.81e-07!358;CL:0000723!4.47e-07!436;CL:0000048!9.27e-07!430 | |||
|ontology_enrichment_celltype_v019=CL:0000473;3.60e-19;39!CL:0000234;3.60e-19;39!CL:0000860;5.38e-19;33!CL:0002057;5.38e-19;33!CL:0000576;3.51e-16;48!CL:0000766;3.48e-12;69!CL:0000763;2.21e-07;100!CL:0000115;6.84e-07;36!CL:0002087;8.36e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.29e-29,48;CL:0000234,1.29e-29,48;CL:0002009,2.38e-29,61;CL:0000557,6.49e-29,67;CL:0000839,1.73e-28,66;CL:0002194,2.54e-28,59;CL:0000576,2.54e-28,59;CL:0000040,2.54e-28,59;CL:0000559,2.54e-28,59;CL:0000766,8.14e-27,72;CL:0000860,1.02e-25,42;CL:0002057,1.02e-25,42;CL:0000738,7.16e-25,136;CL:0002031,6.03e-24,120;CL:0000763,6.71e-24,108;CL:0000049,6.71e-24,108;CL:0000037,4.25e-23,168;CL:0002087,1.43e-22,115;CL:0000988,4.08e-22,177;CL:0002032,6.33e-22,161;CL:0000837,6.33e-22,161;CL:0000034,1.87e-08,441;CL:0002320,3.46e-08,361;CL:0000134,7.31e-08,354;CL:0000115,8.67e-08,36;CL:0000723,2.10e-07,433;CL:0000048,4.45e-07,427;CL:0000219,5.71e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;1.02e-18;42!CL:0000049;2.10e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019= | |||
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| |||
|short_description=p1@RAP2B | |||
}} |
Revision as of 22:13, 12 September 2013
Short description: | p1@RAP2B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_RAP2B_5end |
Coexpression cluster: | C4296_Monocytederived_CD14_Macrophage_ductal_Basophils_cervical_Urothelial |
Association with transcript: | 0bp_to_ENST00000323534, NM_002886, uc003ezr.2_5end |
EntrezGene: | RAP2B |
HGNC: | 9862 |
UniProt: | P61225Q5JQ44 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.29e-29 | 48 |
phagocyte | 1.29e-29 | 48 |
macrophage dendritic cell progenitor | 2.38e-29 | 61 |
granulocyte monocyte progenitor cell | 6.49e-29 | 67 |
myeloid lineage restricted progenitor cell | 1.73e-28 | 66 |
monopoietic cell | 2.54e-28 | 59 |
monocyte | 2.54e-28 | 59 |
monoblast | 2.54e-28 | 59 |
promonocyte | 2.54e-28 | 59 |
myeloid leukocyte | 8.14e-27 | 72 |
classical monocyte | 1.02e-25 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.02e-25 | 42 |
leukocyte | 7.16e-25 | 136 |
hematopoietic lineage restricted progenitor cell | 6.03e-24 | 120 |
myeloid cell | 6.71e-24 | 108 |
common myeloid progenitor | 6.71e-24 | 108 |
hematopoietic stem cell | 4.25e-23 | 168 |
nongranular leukocyte | 1.43e-22 | 115 |
hematopoietic cell | 4.08e-22 | 177 |
hematopoietic oligopotent progenitor cell | 6.33e-22 | 161 |
hematopoietic multipotent progenitor cell | 6.33e-22 | 161 |
stem cell | 1.87e-08 | 441 |
connective tissue cell | 3.46e-08 | 361 |
mesenchymal cell | 7.31e-08 | 354 |
endothelial cell | 8.67e-08 | 36 |
somatic stem cell | 2.10e-07 | 433 |
multi fate stem cell | 4.45e-07 | 427 |
motile cell | 5.71e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 7.49e-28 | 98 |
blood island | 7.49e-28 | 98 |
hemolymphoid system | 1.99e-27 | 108 |
bone marrow | 3.02e-27 | 76 |
immune system | 1.55e-25 | 93 |
bone element | 1.48e-24 | 82 |
skeletal element | 2.07e-24 | 90 |
lateral plate mesoderm | 2.27e-20 | 203 |
skeletal system | 9.13e-20 | 100 |
musculoskeletal system | 2.89e-11 | 167 |
mesoderm | 8.87e-10 | 315 |
mesoderm-derived structure | 8.87e-10 | 315 |
presumptive mesoderm | 8.87e-10 | 315 |
connective tissue | 9.79e-07 | 371 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.