FFCP PHASE1:Hg19::chr8:10158713..10158718,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4482|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=7377|TSSclassifier=N|UniProt=|association_with_transcript=-326bp_to_ENST00000521686_5end|coexpression_cluster_id=C376|description=CAGE_peak_22_at_MSRA_5end|id=chr8:10158713..10158718,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006238;2.32e-07;10|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001950!6.14e-70!20;UBERON:0002619!1.20e-63!22;UBERON:0001869!5.80e-57!32;UBERON:0000956!5.01e-56!25;UBERON:0000203!5.01e-56!25;UBERON:0001893!1.51e-53!34;UBERON:0002780!6.76e-50!41;UBERON:0001890!6.76e-50!41;UBERON:0006240!6.76e-50!41;UBERON:0001049!1.78e-49!57;UBERON:0005068!1.78e-49!57;UBERON:0006241!1.78e-49!57;UBERON:0007135!1.78e-49!57;UBERON:0000955!8.88e-49!69;UBERON:0006238!8.88e-49!69;UBERON:0003080!1.15e-48!42;UBERON:0002791!1.78e-48!33;UBERON:0002616!1.03e-47!59;UBERON:0002020!5.14e-47!34;UBERON:0003528!5.14e-47!34;UBERON:0001017!9.84e-45!82;UBERON:0005743!1.56e-42!86;UBERON:0000073!3.05e-38!94;UBERON:0001016!3.05e-38!94;UBERON:0003075!2.30e-35!86;UBERON:0007284!2.30e-35!86;UBERON:0002346!1.18e-33!90;UBERON:0003056!7.95e-33!61;UBERON:0000200!3.18e-32!6;UBERON:0000033!9.01e-29!123;UBERON:0007023!1.51e-28!115;UBERON:0000153!2.80e-27!129;UBERON:0007811!2.80e-27!129;UBERON:0002021!1.13e-25!5;UBERON:0001871!3.68e-24!7;UBERON:0002771!4.23e-24!3;UBERON:0004121!6.61e-20!169;UBERON:0000924!2.30e-19!173;UBERON:0006601!2.30e-19!173;UBERON:0001872!1.92e-14!5;UBERON:0000025!3.20e-12!194;UBERON:0002902!1.89e-09!1;UBERON:0009899!1.89e-09!1;UBERON:0002581!3.05e-09!1;UBERON:0000064!3.31e-09!219;UBERON:0002022!3.58e-09!1;UBERON:0004111!3.89e-09!241;UBERON:0007190!7.27e-09!1;UBERON:0003112!8.49e-09!1;UBERON:0000032!8.49e-09!1;UBERON:0005253!8.49e-09!1;UBERON:0003128!8.49e-09!1;UBERON:0002241!8.49e-09!1;UBERON:0001703!8.49e-09!1;UBERON:0004761!8.49e-09!1;UBERON:0009617!8.49e-09!1;UBERON:0001882!1.07e-08!1;UBERON:0005403!1.07e-08!1;UBERON:0000477!4.32e-08!286;UBERON:0000483!3.16e-07!309;UBERON:0000475!3.62e-07!365;UBERON:0000119!4.04e-07!312;UBERON:0000349!5.82e-07!5|ontology_enrichment_uberon_v019=UBERON:0002902;3.34e-66;1!UBERON:0009899;3.34e-66;1!UBERON:0002021;3.74e-53;5!UBERON:0001950;1.16e-13;20!UBERON:0002619;1.41e-12;22!UBERON:0000956;2.91e-11;25!UBERON:0000203;2.91e-11;25!UBERON:0001893;5.80e-08;34!UBERON:0003528;2.59e-07;34!UBERON:0002791;2.59e-07;32!UBERON:0002020;2.59e-07;34!UBERON:0001869;2.59e-07;32|ontology_enrichment_uberon_v019_2=UBERON:0002902,4.66e-66,1;UBERON:0009899,4.66e-66,1;UBERON:0002021,3.74e-53,5;UBERON:0001950,1.16e-13,20;UBERON:0002619,1.41e-12,22;UBERON:0000956,2.91e-11,25;UBERON:0000203,2.91e-11,25;UBERON:0000955,1.53e-09,68;UBERON:0006238,1.53e-09,68;UBERON:0002791,4.11e-09,32;UBERON:0001869,4.11e-09,32;UBERON:0003528,1.18e-08,34;UBERON:0002020,1.18e-08,34;UBERON:0001893,1.18e-08,34;UBERON:0001017,3.31e-08,81;UBERON:0001016,1.68e-07,89;UBERON:0002780,2.17e-07,41;UBERON:0001890,2.17e-07,41;UBERON:0003080,2.17e-07,41;UBERON:0006240,2.17e-07,41|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422008249231538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371072392647405,3.99227596002388,0,0,0,0,0,0,0,0,0,0,0,0,0.774054819518572,0.295547618953547,0.438770794307945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569797163602908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485996453264197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366078794705889,0.625954653532499,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829550616910385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,1.75597244962866,0.41023272848151,0.756215088665154,1.10651603942749,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270150338473579,0,0.413373593002368,0.253663240775627,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591954962065642,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.407948941145488,0.872701380680755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p22@MSRA}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=4482 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7377 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=-326bp_to_ENST00000521686_5end | |||
|coexpression_cluster_id=C376 | |||
|description=CAGE_peak_22_at_MSRA_5end | |||
|id=chr8:10158713..10158718,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006238;2.32e-07;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001950!6.14e-70!20;UBERON:0002619!1.20e-63!22;UBERON:0001869!5.80e-57!32;UBERON:0000956!5.01e-56!25;UBERON:0000203!5.01e-56!25;UBERON:0001893!1.51e-53!34;UBERON:0002780!6.76e-50!41;UBERON:0001890!6.76e-50!41;UBERON:0006240!6.76e-50!41;UBERON:0001049!1.78e-49!57;UBERON:0005068!1.78e-49!57;UBERON:0006241!1.78e-49!57;UBERON:0007135!1.78e-49!57;UBERON:0000955!8.88e-49!69;UBERON:0006238!8.88e-49!69;UBERON:0003080!1.15e-48!42;UBERON:0002791!1.78e-48!33;UBERON:0002616!1.03e-47!59;UBERON:0002020!5.14e-47!34;UBERON:0003528!5.14e-47!34;UBERON:0001017!9.84e-45!82;UBERON:0005743!1.56e-42!86;UBERON:0000073!3.05e-38!94;UBERON:0001016!3.05e-38!94;UBERON:0003075!2.30e-35!86;UBERON:0007284!2.30e-35!86;UBERON:0002346!1.18e-33!90;UBERON:0003056!7.95e-33!61;UBERON:0000200!3.18e-32!6;UBERON:0000033!9.01e-29!123;UBERON:0007023!1.51e-28!115;UBERON:0000153!2.80e-27!129;UBERON:0007811!2.80e-27!129;UBERON:0002021!1.13e-25!5;UBERON:0001871!3.68e-24!7;UBERON:0002771!4.23e-24!3;UBERON:0004121!6.61e-20!169;UBERON:0000924!2.30e-19!173;UBERON:0006601!2.30e-19!173;UBERON:0001872!1.92e-14!5;UBERON:0000025!3.20e-12!194;UBERON:0002902!1.89e-09!1;UBERON:0009899!1.89e-09!1;UBERON:0002581!3.05e-09!1;UBERON:0000064!3.31e-09!219;UBERON:0002022!3.58e-09!1;UBERON:0004111!3.89e-09!241;UBERON:0007190!7.27e-09!1;UBERON:0003112!8.49e-09!1;UBERON:0000032!8.49e-09!1;UBERON:0005253!8.49e-09!1;UBERON:0003128!8.49e-09!1;UBERON:0002241!8.49e-09!1;UBERON:0001703!8.49e-09!1;UBERON:0004761!8.49e-09!1;UBERON:0009617!8.49e-09!1;UBERON:0001882!1.07e-08!1;UBERON:0005403!1.07e-08!1;UBERON:0000477!4.32e-08!286;UBERON:0000483!3.16e-07!309;UBERON:0000475!3.62e-07!365;UBERON:0000119!4.04e-07!312;UBERON:0000349!5.82e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002902;3.34e-66;1!UBERON:0009899;3.34e-66;1!UBERON:0002021;3.74e-53;5!UBERON:0001950;1.16e-13;20!UBERON:0002619;1.41e-12;22!UBERON:0000956;2.91e-11;25!UBERON:0000203;2.91e-11;25!UBERON:0001893;5.80e-08;34!UBERON:0003528;2.59e-07;34!UBERON:0002791;2.59e-07;32!UBERON:0002020;2.59e-07;34!UBERON:0001869;2.59e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002902,4.66e-66,1;UBERON:0009899,4.66e-66,1;UBERON:0002021,3.74e-53,5;UBERON:0001950,1.16e-13,20;UBERON:0002619,1.41e-12,22;UBERON:0000956,2.91e-11,25;UBERON:0000203,2.91e-11,25;UBERON:0000955,1.53e-09,68;UBERON:0006238,1.53e-09,68;UBERON:0002791,4.11e-09,32;UBERON:0001869,4.11e-09,32;UBERON:0003528,1.18e-08,34;UBERON:0002020,1.18e-08,34;UBERON:0001893,1.18e-08,34;UBERON:0001017,3.31e-08,81;UBERON:0001016,1.68e-07,89;UBERON:0002780,2.17e-07,41;UBERON:0001890,2.17e-07,41;UBERON:0003080,2.17e-07,41;UBERON:0006240,2.17e-07,41 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422008249231538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371072392647405,3.99227596002388,0,0,0,0,0,0,0,0,0,0,0,0,0.774054819518572,0.295547618953547,0.438770794307945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569797163602908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485996453264197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366078794705889,0.625954653532499,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829550616910385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,1.75597244962866,0.41023272848151,0.756215088665154,1.10651603942749,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270150338473579,0,0.413373593002368,0.253663240775627,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591954962065642,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.407948941145488,0.872701380680755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p22@MSRA | |||
}} |
Revision as of 02:51, 14 September 2013
Short description: | p22@MSRA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_22_at_MSRA_5end |
Coexpression cluster: | C376_brain_temporal_insula_frontal_occipital_postcentral_paracentral |
Association with transcript: | -326bp_to_ENST00000521686_5end |
EntrezGene: | MSRA |
HGNC: | 7377 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital pole | 4.66e-66 | 1 |
pole of cerebral hemisphere | 4.66e-66 | 1 |
occipital lobe | 3.74e-53 | 5 |
neocortex | 1.16e-13 | 20 |
regional part of cerebral cortex | 1.41e-12 | 22 |
cerebral cortex | 2.91e-11 | 25 |
pallium | 2.91e-11 | 25 |
brain | 1.53e-09 | 68 |
future brain | 1.53e-09 | 68 |
regional part of telencephalon | 4.11e-09 | 32 |
cerebral hemisphere | 4.11e-09 | 32 |
brain grey matter | 1.18e-08 | 34 |
gray matter | 1.18e-08 | 34 |
telencephalon | 1.18e-08 | 34 |
central nervous system | 3.31e-08 | 81 |
nervous system | 1.68e-07 | 89 |
regional part of forebrain | 2.17e-07 | 41 |
forebrain | 2.17e-07 | 41 |
anterior neural tube | 2.17e-07 | 41 |
future forebrain | 2.17e-07 | 41 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.