FFCP PHASE1:Hg19::chr10:49815353..49815364,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr10:49815353..49815364,+ | |||
|id=chr10:49815353..49815364,+ | |||
|ontology_enrichment_celltype=CL:0002057!6.15e-66!42;CL:0000860!6.54e-61!45;CL:0002194!4.83e-40!63;CL:0000576!4.83e-40!63;CL:0000040!4.83e-40!63;CL:0000559!4.83e-40!63;CL:0002009!1.51e-38!65;CL:0000839!3.52e-35!70;CL:0000557!1.45e-34!71;CL:0000766!5.73e-34!76;CL:0000763!3.44e-20!112;CL:0000049!3.44e-20!112;CL:0002087!8.13e-20!119;CL:0000738!1.11e-16!140;CL:0002031!4.06e-16!124;CL:0000037!6.62e-12!172;CL:0000566!6.62e-12!172;CL:0000359!6.83e-12!32;CL:0000048!2.15e-11!430;CL:0000723!4.87e-11!436;CL:0002032!5.91e-11!165;CL:0000837!5.91e-11!165;CL:0000988!9.02e-11!182;CL:0000034!1.40e-10!444;CL:0002371!8.44e-10!591;CL:0000144!4.77e-09!625;CL:0000192!2.32e-08!42;CL:0000514!2.32e-08!42;CL:0000548!4.69e-07!679;CL:0000004!4.69e-07!679;CL:0000255!4.69e-07!679;CL:0000012!5.94e-07!682;CL:0000187!7.14e-07!54;CL:0002594!7.30e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.29e-98;33!CL:0002057;1.29e-98;33!CL:0000473;4.09e-64;39!CL:0000234;4.09e-64;39!CL:0000576;3.70e-47;48!CL:0000766;3.58e-32;69!CL:0002087;1.06e-14;104!CL:0000763;6.01e-13;100!CL:0002591;1.17e-08;1!CL:0000738;1.56e-08;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,7.74e-90,42;CL:0002057,7.74e-90,42;CL:0000473,3.83e-78,48;CL:0000234,3.83e-78,48;CL:0002194,9.18e-62,59;CL:0000576,9.18e-62,59;CL:0000040,9.18e-62,59;CL:0000559,9.18e-62,59;CL:0002009,1.20e-59,61;CL:0000839,6.49e-55,66;CL:0000557,4.74e-54,67;CL:0000766,4.36e-50,72;CL:0000763,2.91e-32,108;CL:0000049,2.91e-32,108;CL:0002087,4.45e-30,115;CL:0002031,1.13e-28,120;CL:0000738,7.36e-25,136;CL:0002032,2.10e-20,161;CL:0000837,2.10e-20,161;CL:0000037,2.16e-19,168;CL:0000988,3.31e-18,177;CL:0002591,1.91e-08,1;CL:0000048,2.22e-08,427;CL:0000723,3.36e-08,433;CL:0000034,5.71e-08,441;CL:0000134,6.05e-08,354;CL:0002320,1.05e-07,361;CL:0000219,7.25e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;1.79e-68;42!CL:0000049;3.39e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.02e-31!80;UBERON:0001474!6.98e-29!86;UBERON:0002204!2.60e-28!167;UBERON:0003081!2.20e-27!216;UBERON:0002390!2.82e-26!102;UBERON:0003061!2.82e-26!102;UBERON:0004765!6.46e-25!101;UBERON:0001434!6.46e-25!101;UBERON:0002193!4.30e-23!112;UBERON:0002405!2.31e-19!115;UBERON:0001637!7.13e-15!42;UBERON:0003509!7.13e-15!42;UBERON:0004572!7.13e-15!42;UBERON:0001981!1.08e-11!60;UBERON:0007500!1.08e-11!60;UBERON:0004537!1.08e-11!60;UBERON:0006965!1.08e-11!60;UBERON:0000926!4.34e-11!448;UBERON:0004120!4.34e-11!448;UBERON:0006603!4.34e-11!448;UBERON:0000055!1.42e-09!69;UBERON:0002049!9.13e-09!79;UBERON:0007798!9.13e-09!79;UBERON:0004872!5.18e-08!84;UBERON:0004573!5.92e-08!33;UBERON:0004571!5.92e-08!33;UBERON:0004535!2.87e-07!110;UBERON:0001009!6.10e-07!113;UBERON:0001310!7.30e-07!4 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.76e-47,76;UBERON:0001474,1.37e-43,82;UBERON:0004765,2.04e-39,90;UBERON:0002405,4.92e-38,93;UBERON:0002390,6.45e-36,98;UBERON:0003061,6.45e-36,98;UBERON:0001434,3.97e-35,100;UBERON:0002193,2.91e-32,108;UBERON:0002204,8.72e-26,167;UBERON:0003081,1.69e-20,203;UBERON:0000926,6.23e-13,315;UBERON:0004120,6.23e-13,315;UBERON:0006603,6.23e-13,315;UBERON:0002384,2.21e-07,371;UBERON:0003498,9.73e-07,5;UBERON:0005985,9.73e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.619264493264304,0,0,0,0,0,0,0.553995408531877,0.802177789880567,1.08505435357926,0,0,0,1.45398238779565,1.51150377475524,0.970336244751265,1.16214518452842,1.6446715520873,1.85823822537062,1.43846196161075,1.5369642391746,2.12834006899727,8.96338769915208,10.3277549373412,9.47985406160392,2.07066573496865,1.63743690034707,1.57306439111559,7.95818120164347,9.30694178520671,11.5080682643827,0.329851300186716,0.797854630486527,0,0.870627715885752,1.13477044938228,1.86846674698672,0.502497330513487,0.521482918420201,3.25783267057675,0,1.47311054395026,1.58231193720442,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0.275118041940067,0.208994966536811,0,0,0,0,0,0,0,0.81014194788176,0,0,0.112611480483322,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431428401637234,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0.31481234683064,0.6970372701606,0.308033580176089,1.06461206063404,0,0.18532421910392,0,0,0,0,0,0,0.636406495851874,0,0,0,0,0,1.58510321173008,0.421258456238981,0,0,0,0,0,1.13008116620243,0,0,0.876901770507525,0,0,0.608731130888112,0.6196469961995,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0.406870733204662,0.181848659202559,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47775168788705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:49815353..49815364,+ | |||
}} |
Revision as of 02:45, 11 January 2014
Short description: | p@chr10:49815353..49815364, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:49815353..49815364, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 7.74e-90 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.74e-90 | 42 |
defensive cell | 3.83e-78 | 48 |
phagocyte | 3.83e-78 | 48 |
monopoietic cell | 9.18e-62 | 59 |
monocyte | 9.18e-62 | 59 |
monoblast | 9.18e-62 | 59 |
promonocyte | 9.18e-62 | 59 |
macrophage dendritic cell progenitor | 1.20e-59 | 61 |
myeloid lineage restricted progenitor cell | 6.49e-55 | 66 |
granulocyte monocyte progenitor cell | 4.74e-54 | 67 |
myeloid leukocyte | 4.36e-50 | 72 |
myeloid cell | 2.91e-32 | 108 |
common myeloid progenitor | 2.91e-32 | 108 |
nongranular leukocyte | 4.45e-30 | 115 |
hematopoietic lineage restricted progenitor cell | 1.13e-28 | 120 |
leukocyte | 7.36e-25 | 136 |
hematopoietic oligopotent progenitor cell | 2.10e-20 | 161 |
hematopoietic multipotent progenitor cell | 2.10e-20 | 161 |
hematopoietic stem cell | 2.16e-19 | 168 |
hematopoietic cell | 3.31e-18 | 177 |
smooth muscle cell of the pulmonary artery | 1.91e-08 | 1 |
multi fate stem cell | 2.22e-08 | 427 |
somatic stem cell | 3.36e-08 | 433 |
stem cell | 5.71e-08 | 441 |
mesenchymal cell | 6.05e-08 | 354 |
connective tissue cell | 1.05e-07 | 361 |
motile cell | 7.25e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.76e-47 | 76 |
bone element | 1.37e-43 | 82 |
skeletal element | 2.04e-39 | 90 |
immune system | 4.92e-38 | 93 |
hematopoietic system | 6.45e-36 | 98 |
blood island | 6.45e-36 | 98 |
skeletal system | 3.97e-35 | 100 |
hemolymphoid system | 2.91e-32 | 108 |
musculoskeletal system | 8.72e-26 | 167 |
lateral plate mesoderm | 1.69e-20 | 203 |
mesoderm | 6.23e-13 | 315 |
mesoderm-derived structure | 6.23e-13 | 315 |
presumptive mesoderm | 6.23e-13 | 315 |
connective tissue | 2.21e-07 | 371 |
heart blood vessel | 9.73e-07 | 5 |
coronary vessel | 9.73e-07 | 5 |