FFCP PHASE1:Hg19::chr11:67442051..67442072,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=222 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=411 | |||
|TSSclassifier=strong | |||
|UniProt=P48448 | |||
|association_with_transcript=29bp_to_ENST00000349015,NM_000695,uc001omr.2,uc009ysa.1_5end | |||
|coexpression_cluster_id=C3197 | |||
|description=CAGE_peak_2_at_ALDH3B2_5end | |||
|id=chr11:67442051..67442072,- | |||
|ontology_enrichment_celltype=CL:0002076!9.83e-25!43;CL:0000223!1.60e-17!59;CL:0002368!8.82e-14!13;CL:0000066!1.95e-12!254;CL:0000622!1.87e-11!5;CL:0002251!1.93e-11!21;CL:0002159!1.55e-09!13;CL:0000154!1.90e-09!6;CL:0000244!5.15e-09!4;CL:0000731!5.15e-09!4;CL:0002202!4.99e-08!9;CL:0002632!4.99e-08!9;CL:0002623!1.97e-07!3;CL:0000068!6.60e-07!3;CL:0000069!6.60e-07!3;CL:0000307!6.60e-07!3;CL:0000377!6.60e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000622;1.69e-14;5!CL:0000154;4.27e-12;6!CL:0002159;8.95e-11;14!CL:0000244;4.19e-10;4!CL:0000731;4.19e-10;4!CL:0000575;4.64e-10;2!CL:0000317;7.39e-10;2!CL:1000448;7.39e-10;2!CL:0002308;7.39e-10;2!CL:0002140;7.39e-10;2!CL:0000150;4.44e-08;9!CL:0002368;6.57e-08;13!CL:0000362;6.78e-08;9!CL:0002202;1.29e-07;9!CL:0002632;1.29e-07;9!CL:0002623;6.64e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000622,1.55e-14,5;CL:0000154,3.97e-12,6;CL:0002159,9.12e-11,14;CL:0000244,3.10e-10,4;CL:0000731,3.10e-10,4;CL:0000575,4.54e-10,2;CL:0000317,6.77e-10,2;CL:1000448,6.77e-10,2;CL:0002308,6.77e-10,2;CL:0002140,6.77e-10,2;CL:0002076,2.41e-08,42;CL:0000150,4.24e-08,9;CL:0000362,6.98e-08,9;CL:0002368,7.54e-08,13;CL:0000066,1.06e-07,253;CL:0002202,1.46e-07,9;CL:0002632,1.46e-07,9;CL:0002077,4.36e-07,34;CL:0002623,6.55e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:5093!6.69e-10!4;DOID:1612!6.69e-10!4 | |||
|ontology_enrichment_disease_v019=DOID:5093;2.22e-18;4!DOID:1612;2.22e-18;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,1.82e-18,4;DOID:1612,1.82e-18,4 | |||
|ontology_enrichment_uberon=UBERON:0001004!1.87e-21!72;UBERON:0004119!3.55e-16!169;UBERON:0000925!3.55e-16!169;UBERON:0006595!3.55e-16!169;UBERON:0000166!3.38e-14!21;UBERON:0000161!7.02e-13!35;UBERON:0001044!7.21e-13!6;UBERON:0003293!7.21e-13!6;UBERON:0003294!7.21e-13!6;UBERON:0010047!7.21e-13!6;UBERON:0000167!7.21e-13!6;UBERON:0000065!2.27e-12!53;UBERON:0003408!2.98e-12!10;UBERON:0000165!1.66e-11!28;UBERON:0000930!1.66e-11!28;UBERON:0001007!1.30e-10!155;UBERON:0001555!1.30e-10!155;UBERON:0007026!1.30e-10!155;UBERON:0005178!4.44e-10!34;UBERON:0002224!4.44e-10!34;UBERON:0001041!8.89e-10!98;UBERON:0000915!8.94e-10!52;UBERON:0003102!9.73e-10!95;UBERON:0000077!1.07e-09!130;UBERON:0005181!1.11e-09!35;UBERON:0004921!1.35e-09!129;UBERON:0004185!1.35e-09!129;UBERON:0007196!1.98e-08!14;UBERON:0001558!1.98e-08!14;UBERON:0000078!2.90e-08!18;UBERON:0000072!1.76e-07!46;UBERON:0001444!2.12e-07!48;UBERON:0003126!2.67e-07!7;UBERON:0001005!2.67e-07!7;UBERON:0000365!3.48e-07!5;UBERON:0000464!3.83e-07!104 | |||
|ontology_enrichment_uberon_v019=UBERON:0001044;7.03e-12;6!UBERON:0003293;7.03e-12;6!UBERON:0003294;7.03e-12;6!UBERON:0010047;7.03e-12;6!UBERON:0003408;7.03e-12;6!UBERON:0000167;7.03e-12;6!UBERON:0001041;6.01e-11;14!UBERON:0002419;7.39e-10;2!UBERON:0007771;7.39e-10;2!UBERON:0003297;7.39e-10;2!UBERON:0001821;7.39e-10;2!UBERON:0003487;7.39e-10;2!UBERON:0001820;7.39e-10;2!UBERON:0001829;1.59e-09;2!UBERON:0000365;3.58e-08;5!UBERON:0000161;9.32e-08;19!UBERON:0000166;9.32e-08;19!UBERON:0000310;2.21e-07;10!UBERON:0001043;3.47e-07;3!UBERON:0001003;4.28e-07;15!UBERON:0007376;4.28e-07;15!UBERON:0000915;5.75e-07;52!UBERON:0005910;7.05e-07;6!UBERON:0007196;7.27e-07;15!UBERON:0001558;7.27e-07;15!UBERON:0000165;7.92e-07;28 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001044,6.10e-12,6;UBERON:0003293,6.10e-12,6;UBERON:0003294,6.10e-12,6;UBERON:0010047,6.10e-12,6;UBERON:0000167,6.10e-12,6;UBERON:0002419,6.77e-10,2;UBERON:0007771,6.77e-10,2;UBERON:0003297,6.77e-10,2;UBERON:0001821,6.77e-10,2;UBERON:0003487,6.77e-10,2;UBERON:0001820,6.77e-10,2;UBERON:0005089,6.77e-10,2;UBERON:0005088,6.77e-10,2;UBERON:0001829,1.31e-09,2;UBERON:0000915,1.47e-09,52;UBERON:0000166,5.62e-09,22;UBERON:0001004,2.59e-08,74;UBERON:0000365,2.82e-08,5;UBERON:0003102,9.65e-08,99;UBERON:0000310,2.05e-07,10;UBERON:0003408,3.49e-07,10;UBERON:0001043,3.63e-07,3;UBERON:0009143,3.63e-07,3;UBERON:0001003,4.43e-07,15;UBERON:0007376,4.43e-07,15;UBERON:0007383,4.43e-07,15;UBERON:0005910,5.79e-07,6;UBERON:0004119,6.19e-07,160;UBERON:0000925,6.19e-07,160;UBERON:0006595,6.19e-07,160;UBERON:0005178,7.70e-07,34;UBERON:0002224,7.70e-07,34;UBERON:0007196,8.13e-07,15;UBERON:0001558,8.13e-07,15;UBERON:0001041,9.30e-07,87;UBERON:0001443,9.71e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.522371256399677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10844143144775,5.54631015250181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,8.37879163072847,5.56176664176644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.15797509499322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57978255948989,0.818238361772504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,2.30475599358114,3.37205259772859,0.402115889646523,0.833296006426766,0,0,0,0,0,0,0,0,4.74122638775565,2.57545848628462,0,0,0,0,0,0.283550194484773,0,0,0.383382679165211,0,0,0.207328115540772,0.144119953416961,0.12624243342638,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,4.05156351317944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44257416306811,0,0,6.3169209179579,3.90036147621913,0,0,0,0,0,0,0,0,0,0.330569830721956,0.192190067365106,0.127612712494584,3.33820676823315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.63577591633371,0.670302275535787,1.08890984861323,0.0941438007767792,0.43050537267123,1.68471475667626,9.75546337780687,1.83778720165568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.597743964753209,0,0,0,0,0,0,0.358042349351218,0,0,0,0,0,0,0,17.4486599927106,40.1441399982538,0,0.1137934482855,0.762760950878299,0.945550727071745,0,0,0,0,0,0,0,0,0,0,8.6442721452734,3.77056266668606,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0.652931232636591,0,0,0,0,0,0,0,0,0,0,0,0,1.17398771359254,0,1.18375320854817,0,0,0,0,0,0,0,0,0,0,0,0.694238953340524,1.95984794828755,0,0,0,0,0,0,21.5315616604291,0,0.451961481561065,0,0,0,0,0.561111741760736,0,0,0.576361668616424,0,0,0,0,4.00679858848552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,2.32140586367385,0,4.02521625119119,0.0788057072991982,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40963004463334,0,0.157204305099666,0.414239055347196,0,0,0,0.638341257770182,0,0,0,0,0.785270481251171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.51180652492222,5.59869534029676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,2.38457178078183,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,3.83780436800028,2.48105589194647,0,0.255524855279191,0,0,0,0.227662191351298,1.5966426629275,0,0,0,0,0,0,0.235479278551542,0,0,0,0,0,0,0,0,0,0,0.828864656652147,2.3900586793153,36.6367620761469,0.430227358820278,0,0,1.27016115057279,0.22910686854405,0,0,0.223710863595585,0,0.121917924982269,0,0,0,8.25708688200537,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0.160482733378337,0,2.75237570042724,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.16906122174218,0,0.129177819672012,0.372448285775147,0,0,0,11.321270890642,0.342233301085281,17.1074214657052,5.1639987882727,0.332660356546013,0,0,0,0,0,0.366724332548599,1.62758471326295,0.665756774185513,0,0 | |||
|short_description=p2@ALDH3B2 | |||
}} |
Revision as of 09:02, 11 January 2014
Short description: | p2@ALDH3B2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ALDH3B2_5end |
Coexpression cluster: | C3197_breast_salivary_esophagus_tonsil_tongue_nasal_Urothelial |
Association with transcript: | 29bp_to_ENST00000349015, NM_000695, uc001omr.2, uc009ysa.1_5end |
EntrezGene: | ALDH3B2 |
HGNC: | 411 |
UniProt: | P48448 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell | 1.55e-14 | 5 |
protein secreting cell | 3.97e-12 | 6 |
general ecto-epithelial cell | 9.12e-11 | 14 |
transitional epithelial cell | 3.10e-10 | 4 |
urothelial cell | 3.10e-10 | 4 |
corneal epithelial cell | 4.54e-10 | 2 |
sebum secreting cell | 6.77e-10 | 2 |
epithelial cell of sweat gland | 6.77e-10 | 2 |
epithelial cell of skin gland | 6.77e-10 | 2 |
acinar cell of sebaceous gland | 6.77e-10 | 2 |
endo-epithelial cell | 2.41e-08 | 42 |
glandular epithelial cell | 4.24e-08 | 9 |
epidermal cell | 6.98e-08 | 9 |
respiratory epithelial cell | 7.54e-08 | 13 |
epithelial cell | 1.06e-07 | 253 |
epithelial cell of tracheobronchial tree | 1.46e-07 | 9 |
epithelial cell of lower respiratory tract | 1.46e-07 | 9 |
ecto-epithelial cell | 4.36e-07 | 34 |
acinar cell of salivary gland | 6.55e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
saliva-secreting gland | 6.10e-12 | 6 |
gland of oral region | 6.10e-12 | 6 |
gland of foregut | 6.10e-12 | 6 |
oral gland | 6.10e-12 | 6 |
oral cavity | 6.10e-12 | 6 |
skin gland | 6.77e-10 | 2 |
epidermis gland | 6.77e-10 | 2 |
gland of integumental system | 6.77e-10 | 2 |
sebaceous gland | 6.77e-10 | 2 |
skin sebaceous gland | 6.77e-10 | 2 |
sweat gland | 6.77e-10 | 2 |
sweat gland placode | 6.77e-10 | 2 |
sebaceous gland placode | 6.77e-10 | 2 |
major salivary gland | 1.31e-09 | 2 |
thoracic segment of trunk | 1.47e-09 | 52 |
oral opening | 5.62e-09 | 22 |
respiratory system | 2.59e-08 | 74 |
urothelium | 2.82e-08 | 5 |
surface structure | 9.65e-08 | 99 |
breast | 2.05e-07 | 10 |
gland of gut | 3.49e-07 | 10 |
esophagus | 3.63e-07 | 3 |
esophageal region | 3.63e-07 | 3 |
skin epidermis | 4.43e-07 | 15 |
outer epithelium | 4.43e-07 | 15 |
enveloping layer of ectoderm | 4.43e-07 | 15 |
transitional epithelium | 5.79e-07 | 6 |
endoderm-derived structure | 6.19e-07 | 160 |
endoderm | 6.19e-07 | 160 |
presumptive endoderm | 6.19e-07 | 160 |
thoracic cavity element | 7.70e-07 | 34 |
thoracic cavity | 7.70e-07 | 34 |
tracheobronchial tree | 8.13e-07 | 15 |
lower respiratory tract | 8.13e-07 | 15 |
foregut | 9.30e-07 | 87 |
chest | 9.71e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.82e-18 | 4 |
breast cancer | 1.82e-18 | 4 |