FFCP PHASE1:Hg19::chr11:72432903..72432945,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=116985 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16925 | |||
|TSSclassifier=strong | |||
|UniProt=E7EU13,B2RTS2 | |||
|association_with_transcript=127bp_to_ENST00000426523,ENST00000429686_5end | |||
|coexpression_cluster_id=C564 | |||
|description=CAGE_peak_7_at_ARAP1_5end | |||
|id=chr11:72432903..72432945,- | |||
|ontology_enrichment_celltype=CL:0002076!5.70e-14!43;CL:0000223!1.45e-09!59;CL:0002368!3.03e-09!13;CL:0002159!7.47e-09!13;CL:0002251!7.92e-08!21;CL:0000622!3.73e-07!5;CL:0000066!6.10e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0002076;1.03e-29;42!CL:0002368;5.41e-28;13!CL:0002251;9.24e-21;20!CL:0002159;3.00e-20;14!CL:0000622;1.04e-18;5!CL:0000244;2.14e-16;4!CL:0000731;2.14e-16;4!CL:0000154;1.52e-15;6!CL:0002202;4.34e-15;9!CL:0002632;4.34e-15;9!CL:0002328;1.22e-12;3!CL:0000307;4.37e-12;3!CL:0002623;5.17e-12;3!CL:0002621;1.75e-11;3!CL:0000240;2.26e-10;6!CL:0000311;2.26e-10;6!CL:0000079;2.26e-10;6!CL:0000237;2.26e-10;6!CL:0000150;2.92e-10;9!CL:0000362;3.59e-10;9!CL:0000575;3.38e-09;2!CL:0002327;4.43e-09;4!CL:0000317;2.05e-08;2!CL:1000448;2.05e-08;2!CL:0002308;2.05e-08;2!CL:0002140;2.05e-08;2!CL:0002077;3.86e-08;34!CL:0000312;2.86e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,8.61e-39,42;CL:0000223,9.16e-32,58;CL:0002368,5.27e-28,13;CL:0002251,9.07e-21,20;CL:0000066,2.85e-20,253;CL:0002159,2.97e-20,14;CL:0000622,8.35e-19,5;CL:0000244,1.84e-16,4;CL:0000731,1.84e-16,4;CL:0000154,1.26e-15,6;CL:0002202,4.29e-15,9;CL:0002632,4.29e-15,9;CL:0002328,1.15e-12,3;CL:0000068,4.54e-12,3;CL:0000069,4.54e-12,3;CL:0000307,4.54e-12,3;CL:0000377,4.54e-12,3;CL:0002623,4.71e-12,3;CL:0002621,1.60e-11,3;CL:0000240,2.34e-10,6;CL:0000311,2.34e-10,6;CL:0000079,2.34e-10,6;CL:0000237,2.34e-10,6;CL:0000036,2.34e-10,6;CL:0000357,2.34e-10,6;CL:0000114,2.34e-10,6;CL:0000150,2.59e-10,9;CL:0000362,3.42e-10,9;CL:0000575,3.44e-09,2;CL:0002321,3.71e-09,250;CL:0002327,4.02e-09,4;CL:0002077,4.86e-09,34;CL:0000317,1.80e-08,2;CL:1000448,1.80e-08,2;CL:0002308,1.80e-08,2;CL:0002140,1.80e-08,2;CL:0000076,2.18e-08,63;CL:0000312,2.92e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000223;2.43e-15;58!CL:0000377;4.37e-12;3!CL:0000357;2.26e-10;6!CL:0000114;2.26e-10;6 | |||
|ontology_enrichment_disease=DOID:1749!9.19e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.17e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.21e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0001004!2.00e-09!72;UBERON:0000166!1.37e-07!21;UBERON:0004119!4.40e-07!169;UBERON:0000925!4.40e-07!169;UBERON:0006595!4.40e-07!169;UBERON:0000365!5.75e-07!5;UBERON:0000161!6.06e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0000486;8.41e-15;12!UBERON:0000161;3.41e-14;19!UBERON:0000166;3.41e-14;19!UBERON:0000165;1.01e-13;28!UBERON:0003729;3.97e-13;13!UBERON:0000365;4.00e-13;5!UBERON:0004815;1.22e-12;3!UBERON:0002031;1.22e-12;3!UBERON:0001949;1.75e-11;3!UBERON:0005910;6.14e-11;6!UBERON:0001911;4.43e-09;4!UBERON:0007196;9.08e-09;15!UBERON:0001558;9.08e-09;15!UBERON:0005911;1.57e-08;36!UBERON:0002419;2.05e-08;2!UBERON:0007771;2.05e-08;2!UBERON:0003297;2.05e-08;2!UBERON:0001821;2.05e-08;2!UBERON:0003487;2.05e-08;2!UBERON:0001820;2.05e-08;2!UBERON:0000344;3.49e-08;20!UBERON:0002365;6.76e-08;31!UBERON:0002330;6.76e-08;31!UBERON:0002185;9.78e-08;5!UBERON:0001828;2.70e-07;8!UBERON:0001004;3.94e-07;65!UBERON:0001555;7.42e-07;54 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001004,2.36e-15,74;UBERON:0000166,9.26e-15,22;UBERON:0004119,8.19e-14,160;UBERON:0000925,8.19e-14,160;UBERON:0006595,8.19e-14,160;UBERON:0000365,3.55e-13,5;UBERON:0000165,3.58e-13,29;UBERON:0000930,3.58e-13,29;UBERON:0003729,4.12e-13,13;UBERON:0003102,9.74e-13,99;UBERON:0004815,1.15e-12,3;UBERON:0002031,1.15e-12,3;UBERON:0001949,1.60e-11,3;UBERON:0000033,1.89e-11,56;UBERON:0005910,5.56e-11,6;UBERON:0000161,3.56e-10,36;UBERON:0001444,4.94e-10,49;UBERON:0000153,5.15e-10,62;UBERON:0007811,5.15e-10,62;UBERON:0001911,4.02e-09,4;UBERON:0005333,4.02e-09,4;UBERON:0008425,4.02e-09,4;UBERON:0005311,4.02e-09,4;UBERON:0007196,9.02e-09,15;UBERON:0001558,9.02e-09,15;UBERON:0002419,1.80e-08,2;UBERON:0007771,1.80e-08,2;UBERON:0003297,1.80e-08,2;UBERON:0001821,1.80e-08,2;UBERON:0003487,1.80e-08,2;UBERON:0001820,1.80e-08,2;UBERON:0005089,1.80e-08,2;UBERON:0005088,1.80e-08,2;UBERON:0000344,3.58e-08,20;UBERON:0002365,3.97e-08,31;UBERON:0002330,3.97e-08,31;UBERON:0002185,9.46e-08,5;UBERON:0001828,2.72e-07,8;UBERON:0001007,4.36e-07,145;UBERON:0001555,4.36e-07,145;UBERON:0007026,4.36e-07,145 | |||
|phase1_expression=0.363356758541113,0,0.140954404095971,0,0,0,0,0,0,0,0.697801167972428,0,0.263766978228454,0.123766352960047,0,0,0,0,0.487932798790507,0,0,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,13.7913183671839,6.32532429434325,5.9160641626686,0,0,0,0,0,0,0,0.32389366601898,0,0.145398238779565,0,0,0.232429036905685,0,0,0,0.512321413058201,0,0.344745680736619,0,0,0.188242339542605,0.272906150057846,0.224723484445085,0.612167784741805,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0.209658645508376,0.112328631146495,0,0,0,0.19891667719909,0.365328307529268,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473447805734733,0,0,0,0,0,0.128091319725675,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,13.4789256668241,9.64039551239516,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0.550236083880135,0.208994966536811,0,0,0,0,0,0.24406205754817,0,0,0.0892997282840798,0,0.112611480483322,0,0.949265659568129,0,0,0,18.3159501899864,0,0.25326102332916,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,1.18800285728205,0,0,0,0,0,0,0,0.30648779579902,0,0,0,0,0,0.300091096084402,0,0.257640540045629,0.18611685633159,0,0,0,0,0.161646056818812,0,0,0,3.28543450377605,3.54569956768085,2.86804595389004,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0.171567810298526,5.04851312879678,4.49607013030478,2.6137532827024,8.05519472879207,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0.234004265139238,0,0.93733833986777,3.35964256397719,2.41017665312057,2.50763863567975,4.65014301622339,7.66765358330422,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,1.14861935834114,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0.749007023947182,2.99161459204025,0,0.12269149171914,0,0,0.207970861530807,0.178428988797162,0,0.117141414992713,0.300946099727719,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0.153461973288062,0,0.128139149255701,0,0,0,0,0,0,0,0,0,8.42127175273796,0.920809889358963,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0.0915694648183434,0,4.59412430396938,3.90036147621913,0,0,0,0,0,0,0,0,0,5.12383237619032,4.42037154939744,20.6732594241226,3.94515345336645,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0,0,4.61866141082458,4.02181365321472,5.44454924306613,0.0941438007767792,10.3321289441095,6.73885902670502,15.9634855273203,5.97280840538095,0,0,0,0,0,0,0,0.79312517629427,0,0,1.96032172784825,0,0,0,0,0,0,0.423347165447766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0.307160702099232,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0,2.27586896570999,0,0.472775363535873,0,0,0,0,0,0,0.221158519862449,0,0,0.10893846351899,4.46155981691531,0.153900517007594,0,0,0.179515288819544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0.296521128680622,0,0,0,0.802577647298789,0.234264445725339,0.182454789215666,2.54364004611717,0,0,0,0.30607276163049,0,0.150323419414493,0,0,0,0,0,0,0,0,1.07791637155815,1.74118413160805,0.52418000472609,0,0,0,0,3.006659511141,0.0882561266915003,0,0,0,0.126621591911757,0.195551382734803,0,0,0,0.288180834308212,0,0,0,0,0.942776138467182,0,0,0,0,0.600420288709789,0,0,0,0.262887354279314,0,0.687481272035051,0,0,0.429226048136571,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5476039091159,0,3.01891218839339,0,0.0524545881349981,0,0,0.575745591958336,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0.704815022316672,0.106787412567695,0,0.414239055347196,0,0,0.243585196761792,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.132864840313363,0,0,0,0,0,0,0,0,0,0.419638523158333,1.86623178009892,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.756215088665154,0,0,0,5.10368136205333,0,5.86971515269373,0.577628330751691,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0,1.48863353516788,0,4.34392253974624,0,0,0,0,0.177404740325278,0,0,0.0679697329768317,0,0,0,0.863424021355654,0,0.280272163313789,0,0,0,0.0714765441766563,0,0,0,0,1.86494547746733,6.65802060666405,7.60385627995501,0,0,0,0.423387050190929,0.4582137370881,0,0,0,0,0,0.647428837187895,0.307988420568741,0,0.485710993059139,0.233939463462106,0,0.118920090777569,0,0,0,0.154348316215889,0,0.470317296361523,0.245148321753905,0,0.196308467114945,0.297046400327086,0,0,0,0.0644578879735772,0.0999411559249289,0.892769693028288,0.352894871715692,0,0,0,0,0,0.0679914901909147,0,0.5290268405154,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0.213233981900981,0.476128862927481,0.0645889098360061,0.124149428591716,0.224263725161227,0,0.202117188958219,1.52401723527873,0.684466602170562,0.673520530145875,0.215166616178029,0.332660356546013,0.244209805832924,0,0,0,2.34640942403454,0,0,0,0.201273793591026,0 | |||
|short_description=p7@ARAP1 | |||
}} |
Revision as of 09:16, 11 January 2014
Short description: | p7@ARAP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_ARAP1_5end |
Coexpression cluster: | C564_Small_salivary_Corneal_Bronchial_Urothelial_Keratinocyte_Tracheal |
Association with transcript: | 127bp_to_ENST00000426523, ENST00000429686_5end |
EntrezGene: | ARAP1 |
HGNC: | 16925 |
UniProt: | E7EU13B2RTS2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.21e-08 | 14 |