FFCP PHASE1:Hg19::chr12:32259576..32259585,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=636 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1049 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-183bp_to_ENST00000551848_5end | |||
|coexpression_cluster_id=C128 | |||
|description=CAGE_peak_5_at_BICD1_5end | |||
|id=chr12:32259576..32259585,+ | |||
|ontology_enrichment_celltype=CL:0002319!7.35e-13!25;CL:0000133!2.23e-10!59;CL:0000095!2.20e-08!17;CL:0000123!2.20e-08!17;CL:0000243!1.66e-07!15;CL:0000125!1.66e-07!15;CL:0000030!1.66e-07!15;CL:0000339!1.66e-07!15;CL:0000221!2.24e-07!71;CL:0000333!2.38e-07!41 | |||
|ontology_enrichment_celltype_v019=CL:0000047;1.37e-18;2!CL:0002322;3.27e-16;5!CL:0000039;3.14e-12;7!CL:0000586;3.14e-12;7!CL:0000228;6.61e-10;1!CL:0002372;6.61e-10;1!CL:0002321;1.94e-09;15!CL:0002319;6.00e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,3.03e-16,5;CL:0000039,3.08e-12,7;CL:0000586,3.08e-12,7;CL:0000228,6.33e-10,1;CL:0002372,6.33e-10,1;CL:0002319,7.20e-08,25 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.04e-08;10!UBERON:0005564;1.04e-08;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.79e-15!94;UBERON:0001016!1.79e-15!94;UBERON:0005743!9.84e-15!86;UBERON:0001017!1.45e-14!82;UBERON:0000955!2.21e-10!69;UBERON:0006238!2.21e-10!69;UBERON:0001049!1.71e-09!57;UBERON:0005068!1.71e-09!57;UBERON:0006241!1.71e-09!57;UBERON:0007135!1.71e-09!57;UBERON:0002616!1.19e-08!59;UBERON:0004121!4.10e-08!169;UBERON:0000924!7.39e-08!173;UBERON:0006601!7.39e-08!173;UBERON:0003075!3.41e-07!86;UBERON:0007284!3.41e-07!86;UBERON:0002346!8.43e-07!90;UBERON:0000956!9.90e-07!25;UBERON:0000203!9.90e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;9.14e-11;8!UBERON:0001389;6.61e-10;1!UBERON:0000026;6.61e-10;1!UBERON:0008784;6.61e-10;1!UBERON:0006058;6.61e-10;1!UBERON:0003663;6.61e-10;1!UBERON:0004256;6.61e-10;1!UBERON:0004708;6.61e-10;1!UBERON:0002101;6.61e-10;1!UBERON:0004709;6.61e-10;1!UBERON:0002529;6.61e-10;1!UBERON:0010538;6.61e-10;1!UBERON:0003661;6.61e-10;1!UBERON:0010890;6.61e-10;1!UBERON:0002471;6.61e-10;1!UBERON:0001383;6.61e-10;1!UBERON:0010758;6.61e-10;1!UBERON:0010707;6.61e-10;1!UBERON:0000978;6.61e-10;1!UBERON:0002103;6.61e-10;1!UBERON:0001665;6.61e-10;1!UBERON:0003823;6.61e-10;1!UBERON:0000154;6.61e-10;1!UBERON:0010709;6.61e-10;1!UBERON:0003135;5.86e-08;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,9.00e-11,8;UBERON:0005418,7.55e-10,1;UBERON:0001389,7.55e-10,1;UBERON:0000026,7.55e-10,1;UBERON:0008784,7.55e-10,1;UBERON:0006058,7.55e-10,1;UBERON:0003663,7.55e-10,1;UBERON:0004256,7.55e-10,1;UBERON:0004708,7.55e-10,1;UBERON:0002101,7.55e-10,1;UBERON:0004709,7.55e-10,1;UBERON:0002529,7.55e-10,1;UBERON:0010538,7.55e-10,1;UBERON:0003661,7.55e-10,1;UBERON:0010890,7.55e-10,1;UBERON:0002471,7.55e-10,1;UBERON:0001383,7.55e-10,1;UBERON:0004357,7.55e-10,1;UBERON:0004347,7.55e-10,1;UBERON:0005420,7.55e-10,1;UBERON:0005732,7.55e-10,1;UBERON:0010758,7.55e-10,1;UBERON:0010707,7.55e-10,1;UBERON:0000978,7.55e-10,1;UBERON:0002103,7.55e-10,1;UBERON:0001665,7.55e-10,1;UBERON:0003823,7.55e-10,1;UBERON:0000154,7.55e-10,1;UBERON:0010709,7.55e-10,1;UBERON:0005733,7.55e-10,1;UBERON:0005730,7.55e-10,1;UBERON:0003135,5.80e-08,11 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,2.53299878168311,0,0,0.491467873003018,0,0,0,0.123766352960047,0,0,0,0,0,0.246242116153576,0.204000691244253,0.313454721478088,0.85870796139317,0.410623275218653,1.12988375635323,0.382067028739756,0.656804715599566,0.314843125254717,0,0,0,0,0,0,0.309868802321207,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0.56738522469114,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,0,0,0,0.400395987036012,0,0,0,0,1.76171156811282,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0.294605907474837,0,0,0,0.130059347559878,0,0.276350017785848,0,0,0,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13441780596881,0,0.614843499851882,0.130979075497713,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0.225222960966644,0,0,0.183201743930407,0,0,0,0,0.12663051166458,0,0,0.354668382198357,0.560677600142307,0,0.49333509683432,0,0,0,0.151357427644931,0.576175924479999,0.234321431833797,0.312160076830321,0,0.298897361103602,0,0,0,0,0.122834317311768,0,0,0,0,0,0.168336113954066,0,0,0,0.30648779579902,0.150238058906597,0,0.179389635688862,0,0,0,0.103052529238439,0.515281080091258,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,1.70763188581434,2.25300606146525,0.813357600086629,0.725627385107593,1.26160425437814,0.72995471815166,0,0,0,0.464367928031979,0,0,0.168584690078102,0,0,0.217879444092406,0,0.134831308160164,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,1.44331342025273,0,0,0,0,0.761016608938393,0.790204397959275,0,0,0.234004265139238,0.148631162288728,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0.063497894292169,0.381988425558278,0,0,0,0.600686115687835,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42636905040718,0.144781306667579,0,0.358121926479791,0,0.197030760201927,0.431255149719035,0,1.01637849688985,5.20559415430487,0.773288812777695,0.502548796003046,0,0,2.99161459204025,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0.184369168541703,0.0868836144680828,0,0,0,0,0,0,0,0,0.496215615637554,0.61384789315225,0,0,0,0.321707842287215,0,0,0.710246901252508,0.164254312027618,0,0.116210378459959,0.362578348774867,0.200506470303285,0,0.114814448164607,0,0,0,0.0770153371044148,0,0,0.316654886678627,0,0,0,0,0,0.501689773854853,0,0,0.895499018888713,0,0,0,0,0.325378394664303,0,0.183138929636687,0,0,0,0,0.096670718292122,0.308097234229289,0,0,0.107420244868274,0.145016693914229,0,0.0890320356467374,0,0.192190067365106,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0.179872457583315,0,0,0,0,0,0,0.487426979262569,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0.35667105148125,0,0,0.329294892959902,0,0,0,0,2.17781969722645,0,0,0,0,0,0,0.764637207142375,0,0,0,0.648473311192717,0,0,0.106824071127473,0,0,0,0,0.0711418433484141,0,0,0,0.211673582723883,0,0,0,0.47003968731907,0,0,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0,1.4098700508785,0,0,0.242721043499027,0.111443384277478,0,0,0,0,0.994147647766298,0,0,0,0.211125408127993,0.19924798825107,0.276283915531148,0,1.43176155503017,0.246169610922139,0,0.179736702294654,0,0,0.197286811273867,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0.520874984799877,0,0.120596438625408,0,0.442317039724898,0.886642856860642,0.219385397153973,0.10893846351899,0,0.0769502585037971,0.113942055847001,0,0.0897576444097721,0,0,0.0915975934018623,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593042257361244,0.494255755786011,0.313265848516366,0.134802265961354,0,0,0.364909578431332,0.19566461893209,0.728341138602278,0,0,0.61214552326098,0,0.450970258243478,0.103688191397247,0,0,0,0,0.569219092059585,0,0.173559738335131,0.195984794828755,0.0870592065804026,0.34945333648406,0,0,0.146178634172371,0,0,0.529536760149002,0,0,0.19871461170299,0.316553979779393,0,0,0,0.19980960958213,0,0.114536596165916,0.171594997861965,0,0.248505071130865,0,0.407712618220842,0.209205692624666,0.101998217636322,0,0,0.136905378891993,0,0,0.262887354279314,0,0,0,0,0,0,0.268733889946905,0,0,0.0787831823072236,0.0824158583811665,0.0674035438541849,0,0.0846733320657845,0,0.136203406111576,0.643012593860077,0.825236619583403,0.415440338029185,0,0,0.364497339948148,0.335434687599266,0.0788057072991982,0.367182116944987,0.316801009558219,0,0,0,0,0,0,0,0,0,0,0,0.226624183040251,0,0,0.258565912723101,0.26446520348538,0,0,0,0,0.414239055347196,0,0.197611631897944,0.60896299190448,0.638341257770182,0,0,0.306345576763462,0,0,0,0.122026264901963,0.1251909307065,0.573409195690071,0,0.248385611765534,2.07522952404346,0.124980407962107,0.151649117541648,0.570930667089935,0.235265819698172,0.468334905806882,0.144921028610825,0.149254802886874,0.233713309847224,0,0.189403005275089,0,0,0,0.151230923763239,0,0.147855149989634,0.318593534327405,0,0.155262956876259,0,0,0,0.300515217994437,0,0,0.363697318405119,0.107410557042488,0,0.796191777397232,0,0,0,0,0,0,0,0.226705925512272,0,0,0.179088841081487,0.308801447160972,0,0,0.192914038270915,0.168942440653073,0.7687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| |||
|short_description=p5@BICD1 | |||
}} |
Revision as of 12:55, 11 January 2014
Short description: | p5@BICD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_BICD1_5end |
Coexpression cluster: | C128_testicular_choriocarcinoma_H9_teratocarcinoma_pancreatic_iPS_HES3GFP |
Association with transcript: | -183bp_to_ENST00000551848_5end |
EntrezGene: | BICD1 |
HGNC: | 1049 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 3.03e-16 | 5 |
germ line cell | 3.08e-12 | 7 |
germ cell | 3.08e-12 | 7 |
multinucleate cell | 6.33e-10 | 1 |
myotube | 6.33e-10 | 1 |
neural cell | 7.20e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
testis | 9.00e-11 | 8 |
hindlimb bud | 7.55e-10 | 1 |
soleus muscle | 7.55e-10 | 1 |
appendage | 7.55e-10 | 1 |
lower limb segment | 7.55e-10 | 1 |
multi-limb segment region | 7.55e-10 | 1 |
hindlimb muscle | 7.55e-10 | 1 |
hindlimb zeugopod muscle | 7.55e-10 | 1 |
paired limb/fin | 7.55e-10 | 1 |
limb | 7.55e-10 | 1 |
pelvic appendage | 7.55e-10 | 1 |
limb segment | 7.55e-10 | 1 |
paired limb/fin segment | 7.55e-10 | 1 |
limb muscle | 7.55e-10 | 1 |
pelvic complex muscle | 7.55e-10 | 1 |
zeugopod | 7.55e-10 | 1 |
muscle of leg | 7.55e-10 | 1 |
paired limb/fin bud | 7.55e-10 | 1 |
limb bud | 7.55e-10 | 1 |
pelvic appendage bud | 7.55e-10 | 1 |
limb/fin field | 7.55e-10 | 1 |
subdivision of organism along appendicular axis | 7.55e-10 | 1 |
appendage girdle complex | 7.55e-10 | 1 |
leg | 7.55e-10 | 1 |
hindlimb | 7.55e-10 | 1 |
triceps surae | 7.55e-10 | 1 |
hindlimb zeugopod | 7.55e-10 | 1 |
posterior region of body | 7.55e-10 | 1 |
pelvic complex | 7.55e-10 | 1 |
limb field | 7.55e-10 | 1 |
hindlimb/pelvic fin field | 7.55e-10 | 1 |
male reproductive organ | 5.80e-08 | 11 |