FFCP PHASE1:Hg19::chr13:25591521..25591529,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr13:25591521..25591529,+ | |||
|id=chr13:25591521..25591529,+ | |||
|ontology_enrichment_celltype=CL:0000055!7.51e-10!180;CL:0000680!3.79e-08!57;CL:0000056!3.79e-08!57;CL:0000355!3.79e-08!57;CL:0000187!6.33e-07!54 | |||
|ontology_enrichment_celltype_v019=CL:0002363;5.42e-19;2!CL:0000594;5.46e-13;3!CL:0002336;2.28e-10;1!CL:0002261;2.28e-10;1!CL:0002170;2.28e-10;1!CL:0002379;2.28e-10;1!CL:0000349;6.66e-08;19!CL:0002569;6.28e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002363,4.96e-19,2;CL:0000008,4.96e-19,2;CL:0000594,3.16e-13,3;CL:0002379,2.50e-10,1;CL:0002336,4.75e-10,1;CL:0002261,4.75e-10,1;CL:0002170,4.75e-10,1;CL:0000349,7.44e-08,19;CL:0002569,7.75e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000008;5.42e-19;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3620;2.28e-10;1!DOID:3565;2.28e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3620,2.50e-10,1;DOID:3565,2.50e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0000914!4.10e-09!83;UBERON:0002329!4.10e-09!83;UBERON:0003077!4.10e-09!83;UBERON:0003059!4.10e-09!83;UBERON:0007282!4.10e-09!83;UBERON:0009618!4.10e-09!83;UBERON:0007285!4.10e-09!83;UBERON:0000486!2.54e-08!82;UBERON:0002385!4.38e-08!63;UBERON:0001015!4.38e-08!63;UBERON:0000383!4.38e-08!63;UBERON:0001134!1.62e-07!61;UBERON:0002036!1.62e-07!61;UBERON:0003082!1.62e-07!61;UBERON:0000481!1.98e-07!347;UBERON:0004290!2.67e-07!70 | |||
|ontology_enrichment_uberon_v019=UBERON:0003566;5.42e-19;2!UBERON:0001777;5.42e-19;2!UBERON:0004905;7.06e-11;8!UBERON:0000982;7.06e-11;8!UBERON:0004770;7.06e-11;8!UBERON:0003891;5.70e-10;4!UBERON:0000964;5.70e-10;4!UBERON:0010409;5.70e-10;4!UBERON:0011135;3.78e-08;5!UBERON:0002216;3.78e-08;5!UBERON:0011134;3.78e-08;5!UBERON:0002209;3.78e-08;5!UBERON:0002213;3.78e-08;5!UBERON:0007844;3.78e-08;5!UBERON:0011138;3.78e-08;5!UBERON:0001130;3.78e-08;5!UBERON:0001066;3.78e-08;5!UBERON:0001468;3.78e-08;5!UBERON:0003422;6.28e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003566,4.96e-19,2;UBERON:0001777,4.96e-19,2;UBERON:0004905,6.72e-11,8;UBERON:0000982,6.72e-11,8;UBERON:0004770,6.72e-11,8;UBERON:0003891,5.46e-10,4;UBERON:0000964,5.46e-10,4;UBERON:0010409,5.46e-10,4;UBERON:0004348,5.46e-10,4;UBERON:0005427,5.46e-10,4;UBERON:0011135,3.52e-08,5;UBERON:0002216,3.52e-08,5;UBERON:0011134,3.52e-08,5;UBERON:0002209,3.52e-08,5;UBERON:0002213,3.52e-08,5;UBERON:0005856,3.52e-08,5;UBERON:0005866,3.52e-08,5;UBERON:0005863,3.52e-08,5;UBERON:0007844,3.52e-08,5;UBERON:0011138,3.52e-08,5;UBERON:0001130,3.52e-08,5;UBERON:0001066,3.52e-08,5;UBERON:0001468,3.52e-08,5;UBERON:0003422,7.75e-07,6 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0.281908808191942,0,0,0,0,0,0.522371256399677,0,0,0.218441372130172,0.263766978228454,1.48519623552056,0.331397375727916,0,0,0,0,0,0.204000691244253,0,0.286235987131057,0.410623275218653,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40648818027883,0,0,0.144846518960824,0,0,0.378139268656271,0.221729397462564,0.527008714158756,0.0654895377488563,0,0.370784442784429,0,0,0,0,0,0,0.39752481473341,0,0,0,0,0,0,0,0,0,0,0.760272105718513,0.24406205754817,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0.496971951695318,0.633152558322899,0.264818361626438,0,0.354668382198357,0,0,0.74000264525148,0,0,0,0,0.576175924479999,0.937285727335186,0,0,0.896692083310806,0,0.161872944368132,0,0,0,0.929932030581889,0,0,0,0.718618141816238,0.168336113954066,0.500474079487857,0,0,0.30648779579902,0.300476117813194,0.794025282120147,0,0,0.211931901159562,0,0,0,0,0.168776332241266,0,0,0.0920498986422993,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,2.76269842704961,0.928735856063958,0,0,0,0,0,0.435758888184812,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0.100528972411631,1.01847289674383,1.62904152655162,1.03993478527958,0,0.231860809950154,0.352226082707465,0.288732895522148,0,0,0,0,0,0,0,0,0.16798212819886,0.283550194484773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36669142910475,0.387815147273333,0,0.845302752556,0,0,0,0,0,0.142977993658148,1.08524321078289,0,0.325736184293735,0,0,0.602878754119172,0,0.599837947092342,0,0,0,0.239624855491583,1.14861935834114,0,0.289562613335158,0.61642896765115,0.179060963239896,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,1.10422342547226,0.500170521059677,0,0.415941723061614,0.178428988797162,0.473107245101804,0.117141414992713,0,0,1.03473071292505,0.664225598535437,0.553107505625109,0.781952530212746,0,0,0,0,0,0.303127571446259,3.32870879020994,0.30239029332968,0,0.153461973288062,0.280660094433074,0.128139149255701,0,0.160853921143607,0,0.308419387605311,0.532685175939381,0.328508624055237,0,0.464841513839837,0.362578348774867,0.200506470303285,0.460404944679482,0.229628896329213,0.182091168006717,0.393373244878272,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0.256450125116389,0,0,0,0.0915694648183434,0.082509499920588,0,0,0,0.870036464629098,0,0,0,1.39646318328756,1.59518363305651,0.340906509664404,0.356128142586949,0,0,0,0.10115778085555,0,0,2.0911118104818,0,0,0.869932992075073,0.37064843820784,0.143124886741991,0.372158369359667,0.632758849437452,0.571890581771475,0.255897791311334,0,0,0,0.359744915166629,0,0.589062011728432,0.202182481573316,0,0,0.975267478179181,0.243713489631284,0,0,0.141405431953713,0,1.10273068709225,0,0,0.578775534266688,0,0.608731130888112,0.6196469961995,0.281695602532241,0.286822704408103,2.55447506634115,0.7133421029625,0,2.53329162357197,0,0,0.349934720244983,0.288666338176536,0,0,0.0941438007767792,0.43050537267123,0,0,0.689170200620878,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0,0,0,0,0,0,0,0.324621940274555,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0.281338832821026,0.667852230137435,0,0,0,0,0,1.22722419002586,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0.260427761085233,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0,0,0,0.21787692703798,0.139423744278603,0.0769502585037971,0,0,0.179515288819544,0,0.31900115973192,1.28236630762607,0,0,0,0,0,0,0.167821586975843,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0.104421949505455,0.202203398942031,0,0.234264445725339,0,0,0,0,0,0,0.063186579628488,0.150323419414493,0,0.664653872707185,0,0.313932918407225,0,0.284609546029793,0,0,0,0,0.17472666824203,0,0,0,0.0821154570532092,0.0969890164884194,0.0882561266915003,0,0.274083849293502,0,0.126621591911757,0,0.561111741760736,0,0,0,0.343609788497747,0,0,0.124252535565433,0,0.135904206073614,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0.201550417460179,0,0,0.472699093843342,0.0824158583811665,0.471824806979294,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.157611414598396,0.104909176269996,0,0,0.383830394638891,0,0,0,0,0,0,0,0,0.170388021785422,0.113312091520126,0,0,0.387848869084652,0.13223260174269,0,0,0,0,0,0,0,0,0,0.544017803369474,0.2506898940227,0,0,0,0,0.122026264901963,0,0,0,0.248385611765534,0,0,0,0,1.17632909849086,0,0,0.149254802886874,0,0,0,0.251567901752575,0.889811221596536,0,0.302461847526478,0,0.147855149989634,0,0,0,0.414706207840855,0,0,0.150257608997218,0.761610424337591,0,0,0.322231671127465,0.928067519756987,0.398095888698616,0.400027764663154,0.343395705182793,0.673498977531838,0,0,0.214441591374926,0.260994291965212,0.226705925512272,0.463044948647668,0,0,0.308801447160972,0.219284049578707,0.530067437837643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256916900385838,0,0,0.205116364240755,0.756215088665154,0.0691572524642179,0,0,0.196295437002051,0,0,0,0,0.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| |||
|short_description=p@chr13:25591521..25591529,+ | |||
}} |
Revision as of 17:00, 11 January 2014
Short description: | p@chr13:25591521..25591529, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:25591521..25591529, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
keratocyte | 4.96e-19 | 2 |
migratory cranial neural crest cell | 4.96e-19 | 2 |
skeletal muscle satellite cell | 3.16e-13 | 3 |
meningothelial cell | 2.50e-10 | 1 |
buccal mucosa cell | 4.75e-10 | 1 |
endothelial cell of viscerocranial mucosa | 4.75e-10 | 1 |
keratinized cell of the oral mucosa | 4.75e-10 | 1 |
extraembryonic cell | 7.44e-08 | 19 |
mesenchymal stem cell of umbilical cord | 7.75e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
head connective tissue | 4.96e-19 | 2 |
substantia propria of cornea | 4.96e-19 | 2 |
articulation | 6.72e-11 | 8 |
skeletal joint | 6.72e-11 | 8 |
articular system | 6.72e-11 | 8 |
stroma | 5.46e-10 | 4 |
cornea | 5.46e-10 | 4 |
eye surface | 5.46e-10 | 4 |
optic eminence | 5.46e-10 | 4 |
corneal primordium | 5.46e-10 | 4 |
intervertebral cartilage | 3.52e-08 | 5 |
symphysis | 3.52e-08 | 5 |
nonsynovial joint | 3.52e-08 | 5 |
fibrous joint | 3.52e-08 | 5 |
cartilaginous joint | 3.52e-08 | 5 |
developing mesenchymal condensation | 3.52e-08 | 5 |
pre-cartilage condensation | 3.52e-08 | 5 |
cartilaginous condensation | 3.52e-08 | 5 |
cartilage element | 3.52e-08 | 5 |
post-cranial axial skeletal system | 3.52e-08 | 5 |
vertebral column | 3.52e-08 | 5 |
intervertebral disk | 3.52e-08 | 5 |
intervertebral joint | 3.52e-08 | 5 |
mesenchyme of umbilical cord | 7.75e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
central nervous system cancer | 2.50e-10 | 1 |
meningioma | 2.50e-10 | 1 |