FFCP PHASE1:Hg19::chr15:52312159..52312192,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5597 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6879 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=40bp_to_ENST00000558841_5end | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_3_at_MAPK6_5end | |||
|id=chr15:52312159..52312192,+ | |||
|ontology_enrichment_celltype=CL:0000766!2.80e-30!76;CL:0002057!1.57e-26!42;CL:0000557!2.32e-26!71;CL:0002009!7.02e-25!65;CL:0000839!9.66e-25!70;CL:0000860!3.71e-24!45;CL:0002194!7.34e-24!63;CL:0000576!7.34e-24!63;CL:0000040!7.34e-24!63;CL:0000559!7.34e-24!63;CL:0000134!5.89e-17!358;CL:0000063!1.83e-16!578;CL:0002320!2.36e-16!365;CL:0002371!9.00e-16!591;CL:0000723!1.28e-15!436;CL:0000144!2.26e-15!625;CL:0000048!2.39e-15!430;CL:0000548!1.69e-14!679;CL:0000004!1.69e-14!679;CL:0000255!1.69e-14!679;CL:0000034!2.29e-14!444;CL:0000012!2.34e-14!682;CL:0000219!3.70e-14!390;CL:0000738!9.42e-13!140;CL:0000763!9.54e-13!112;CL:0000049!9.54e-13!112;CL:0002031!2.25e-09!124;CL:0000003!1.16e-08!722;CL:0002087!2.08e-08!119 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.23e-25;33!CL:0002057;7.23e-25;33!CL:0000473;7.85e-23;39!CL:0000234;7.85e-23;39!CL:0000576;6.91e-19;48!CL:0000766;3.88e-17;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.64e-39,72;CL:0000473,1.27e-35,48;CL:0000234,1.27e-35,48;CL:0000557,6.48e-35,67;CL:0000860,4.83e-33,42;CL:0002057,4.83e-33,42;CL:0000839,1.18e-32,66;CL:0002009,1.22e-32,61;CL:0002194,2.46e-31,59;CL:0000576,2.46e-31,59;CL:0000040,2.46e-31,59;CL:0000559,2.46e-31,59;CL:0000134,1.45e-23,354;CL:0002320,7.52e-22,361;CL:0000219,6.97e-21,386;CL:0000723,1.32e-20,433;CL:0000048,7.03e-20,427;CL:0000034,1.26e-19,441;CL:0000763,3.81e-18,108;CL:0000049,3.81e-18,108;CL:0000738,6.94e-18,136;CL:0002031,1.07e-13,120;CL:0002087,3.12e-12,115;CL:0000037,4.86e-09,168;CL:0002032,3.67e-08,161;CL:0000837,3.67e-08,161;CL:0000988,3.83e-08,177;CL:0002393,3.67e-07,9;CL:0002397,3.67e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;4.80e-24;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.41e-25!80;UBERON:0001474!6.27e-24!86;UBERON:0004765!2.26e-22!101;UBERON:0001434!2.26e-22!101;UBERON:0002405!3.13e-20!115;UBERON:0002390!7.00e-16!102;UBERON:0003061!7.00e-16!102;UBERON:0002384!8.76e-16!375;UBERON:0002204!1.15e-14!167;UBERON:0002193!7.48e-14!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.43e-34,76;UBERON:0001474,3.74e-31,82;UBERON:0004765,5.94e-29,90;UBERON:0001434,1.70e-24,100;UBERON:0002405,1.26e-23,93;UBERON:0002390,1.20e-22,98;UBERON:0003061,1.20e-22,98;UBERON:0002384,2.46e-21,371;UBERON:0002193,4.53e-19,108;UBERON:0002204,4.21e-15,167;UBERON:0003081,5.57e-09,203;UBERON:0000926,7.94e-09,315;UBERON:0004120,7.94e-09,315;UBERON:0006603,7.94e-09,315 | |||
|phase1_expression=3.99692434395225,4.92431204949261,3.80576891059122,2.00146596706261,2.23480547213644,2.61701557230111,0,3.15859936713415,0.783556884599516,0,0,0,0.263766978228454,0.866364470720326,0.994192127183747,0,1.20538905604795,0,0.487932798790507,0,0.204000691244253,0,0.286235987131057,0.136874425072884,0.125542639594803,0.840547463227464,1.31360943119913,1.10195093839151,38.9430634080415,38.7667692078185,47.8381821046675,0.919421224478927,1.204823675113,3.32778609150109,0,0.142169232487422,0.587200878669695,141.268829175629,80.2177789880567,73.5666851726738,1.34349284543955,1.6194683300949,1.03030227053675,13.0858414901608,14.7371618038636,5.57943340731977,41.8372266430232,39.0609493620735,56.676265873804,60.7030947799737,55.5868733168148,89.8632473576624,153.756573608532,111.668850260002,124.592367666794,25.7892005173368,25.3802719553797,31.910734791202,91.212999926529,92.427559797915,74.8024437184878,12.5343494070952,19.7469021045416,13.2129672665135,68.1991710777172,47.6603588740557,52.3170689156283,46.2297544072408,70.9216769051474,79.4911171620727,51.4589577238363,86.9135220930653,61.0772407760907,10.5627643155971,27.2133503955256,15.0954224766031,6.8520464999362,4.8056605709282,2.89306056054744,2.56511469367124,2.38700012638908,3.10529061399878,0,0,0,0,0,0.574752439954483,0,0,0.569212969109448,1.17447437874188,1.14681968437569,0,19.6177997043538,0,0.590129310341499,0,0.822405995998037,0.167186495390678,0.32592226663359,0,0,1.33692548262208,0,0,0,0.25618263945135,0.910415432919148,0,0.276350017785848,0,0,0,0,0.226618685395132,0,0,0.253019692019503,0,0,0,0.602300476311091,0,0,0,0,1.00803371612366,0.534880391567015,0.868946423296794,0,0.670700859703636,0.511450247374121,1.0843174571537,1.50401373190767,2.17269778441236,4.7717156823066,3.40644409211845,0.472674085820339,0.665188192387692,0.351339142772504,1.5062593682237,0.364295288292542,0.370784442784429,2.27183175558278,3.48259474598534,2.39324328933957,3.57735936458013,3.43196946468077,1.48583000531826,0.596287222100115,0,0,1.13061588384802,0,0.275118041940067,0.208994966536811,1.55050055501597,1.42306505074684,0,0.805658634218294,0,0.24406205754817,0.367663080345869,0,0.446498641420399,0,0,1.53316637465883,0,0.183201743930407,7.9068250461638,23.2668158488995,0.436094052142534,1.49091585508596,2.65924074495618,23.4364250039397,3.44203944898576,1.41867352879343,0.560677600142307,0,1.97334038733728,1.55605517699883,0.67355336034844,0.653847612453835,0.454072282934794,1.72852777344,0.468642863667593,1.24864030732128,0.570471821544449,1.79338416662161,0.23486899728753,0.809364721840658,0.421352420106746,1.63323337003915,0,1.34323515528495,0,0.494533858557114,0,0.718618141816238,0.168336113954066,0.125118519871964,0.277064115484183,0.438977620880838,1.22595118319608,0.901428353439581,0.567160915800105,2.33206526395521,1.2813443329114,1.48352330811693,1.50045548042201,1.33968288009971,3.86460810068444,0.744467425326359,5.56961896396179,2.14361411354637,2.77677151668526,1.01254888506529,0.80823028409406,6.39017266529906,1.30977727695932,0.847802961552438,2.89891279744945,3.54569956768085,2.29443676311203,0,0.132529768321485,0.348581828608555,0.207322110030741,0,0,0,0,1.38134921352481,0.928735856063958,0,0.236613600079688,1.18009283054671,0.241011029883482,0.330881918197182,0,0.237270619111097,0.404493924480493,0,0.38474715694639,0,0,0,1.47008711385542,17.7457048750563,5.89696330006576,4.13552934676983,0,4.30459534900897,0.686271241194102,4.39001141634502,1.1240175325762,2.31216636546751,2.4998880192803,0.651616610620649,0,0,0.927443239800615,0.587043471179108,0.288732895522148,0.462985512576611,0.190254152234598,0,0,1.72351904261178,3.27605971194933,2.52672975890838,4.68669169933885,3.19166043577833,2.55195175036296,12.8964272692102,5.81267877027924,1.53353071666084,12.8092441852945,4.4024217006613,7.25648404392702,3.747118788841,6.18587923789262,1.77794104018073,1.90994212779139,1.17217447210047,0,0.411309970813294,2.70308752059526,0.857479297891735,0,0,0.66004457238855,8.40266152425555,0,0,4.5209479819428,3.12022310734098,0.257207374262142,0,0,1.42977993658148,2.71310802695722,0,1.30294473717494,1.77695974371273,0,6.33022691825131,2.61460037580088,1.89948683245908,7.29742683847143,5.02257091432126,4.21667878966063,3.35474797688216,2.29723871668228,0,3.76431397335706,2.87666851570537,1.79060963239896,0.224170287987055,3.94061520403854,2.80315847317372,6.16046574142792,0.76228387266739,1.30139853857622,0,0,0,2.24702107184155,2.99161459204025,2.07207756718018,0.613457458595699,0,0.813795071099207,2.70362119990049,4.46072471992904,1.26161932027148,0.35142424497814,2.10662269809403,2.27407504055985,2.0694614258501,0.664225598535437,1.10621501125022,1.73767228936166,0,0.343143423810856,2.89475236572042,6.47142602455851,5.87001567918944,0.909382714338778,0,0.604780586659361,5.45837177201309,6.29194090481056,1.68396056659844,5.63812256725084,3.58195074346692,2.73451665944133,0,1.07946785661859,1.42049380250502,3.12083192852475,1.03850885836724,2.2079971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| |||
|short_description=p3@MAPK6 | |||
}} |
Revision as of 23:36, 11 January 2014
Short description: | p3@MAPK6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MAPK6_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 40bp_to_ENST00000558841_5end |
EntrezGene: | MAPK6 |
HGNC: | 6879 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.64e-39 | 72 |
defensive cell | 1.27e-35 | 48 |
phagocyte | 1.27e-35 | 48 |
granulocyte monocyte progenitor cell | 6.48e-35 | 67 |
classical monocyte | 4.83e-33 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.83e-33 | 42 |
myeloid lineage restricted progenitor cell | 1.18e-32 | 66 |
macrophage dendritic cell progenitor | 1.22e-32 | 61 |
monopoietic cell | 2.46e-31 | 59 |
monocyte | 2.46e-31 | 59 |
monoblast | 2.46e-31 | 59 |
promonocyte | 2.46e-31 | 59 |
mesenchymal cell | 1.45e-23 | 354 |
connective tissue cell | 7.52e-22 | 361 |
motile cell | 6.97e-21 | 386 |
somatic stem cell | 1.32e-20 | 433 |
multi fate stem cell | 7.03e-20 | 427 |
stem cell | 1.26e-19 | 441 |
myeloid cell | 3.81e-18 | 108 |
common myeloid progenitor | 3.81e-18 | 108 |
leukocyte | 6.94e-18 | 136 |
hematopoietic lineage restricted progenitor cell | 1.07e-13 | 120 |
nongranular leukocyte | 3.12e-12 | 115 |
hematopoietic stem cell | 4.86e-09 | 168 |
hematopoietic oligopotent progenitor cell | 3.67e-08 | 161 |
hematopoietic multipotent progenitor cell | 3.67e-08 | 161 |
hematopoietic cell | 3.83e-08 | 177 |
intermediate monocyte | 3.67e-07 | 9 |
CD14-positive, CD16-positive monocyte | 3.67e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.43e-34 | 76 |
bone element | 3.74e-31 | 82 |
skeletal element | 5.94e-29 | 90 |
skeletal system | 1.70e-24 | 100 |
immune system | 1.26e-23 | 93 |
hematopoietic system | 1.20e-22 | 98 |
blood island | 1.20e-22 | 98 |
connective tissue | 2.46e-21 | 371 |
hemolymphoid system | 4.53e-19 | 108 |
musculoskeletal system | 4.21e-15 | 167 |
lateral plate mesoderm | 5.57e-09 | 203 |
mesoderm | 7.94e-09 | 315 |
mesoderm-derived structure | 7.94e-09 | 315 |
presumptive mesoderm | 7.94e-09 | 315 |