FFCP PHASE1:Hg19::chr17:38444205..38444214,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=990 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1744 | |||
|TSSclassifier=strong | |||
|UniProt=Q99741 | |||
|association_with_transcript=59bp_to_NM_001254,uc002huj.1_5end | |||
|description=CAGE_peak_3_at_CDC6_5end | |||
|id=chr17:38444205..38444214,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.25e-09!254 | |||
|ontology_enrichment_celltype_v019=CL:0000222;1.97e-08;1!CL:0002553;1.97e-08;1!CL:0002032;5.39e-08;1!CL:0002127;5.39e-08;1!CL:0000911;5.39e-08;1!CL:1001319;5.39e-08;1!CL:1000600;5.39e-08;1!CL:0000557;5.39e-08;1!CL:0000814;5.39e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,1.91e-08,1;CL:1001319,3.11e-08,1;CL:1000600,3.11e-08,1;CL:0002127,8.12e-08,1;CL:0000914,8.12e-08,1;CL:0000911,8.12e-08,1;CL:0000814,8.12e-08,1;CL:0002042,8.12e-08,1;CL:0002039,8.12e-08,1;CL:0002040,8.12e-08,1;CL:0002041,8.12e-08,1 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.73e-17;29 | |||
|ontology_enrichment_disease=DOID:14566!1.04e-38!239;DOID:162!3.61e-38!235;DOID:0050687!3.60e-26!143;DOID:305!5.39e-22!106;DOID:0050686!2.57e-12!137;DOID:7!1.68e-08!39;DOID:2531!4.66e-07!51;DOID:0060083!4.66e-07!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,7.98e-10,106;DOID:0050687,6.40e-09,143 | |||
|ontology_enrichment_uberon=UBERON:0001737!3.88e-10!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.23e-26;9!UBERON:0001557;1.23e-26;9!UBERON:0000072;6.66e-13;37!UBERON:0000065;3.64e-10;44!UBERON:0004645;5.39e-08;1!UBERON:0001256;5.39e-08;1!UBERON:0001259;5.39e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,4.23e-27,9;UBERON:0001557,8.32e-17,19;UBERON:0008947,3.59e-13,38;UBERON:0003258,3.59e-13,38;UBERON:0000072,9.05e-13,47;UBERON:0000065,6.83e-11,54;UBERON:0004645,3.11e-08,1;UBERON:0001256,3.11e-08,1;UBERON:0001259,3.11e-08,1;UBERON:0001004,1.72e-07,74 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0.273748850145768,0,0,0.164201178899891,0.314843125254717,0,0,0,0,0,0,0.619737604642413,0.710846162437108,0.587200878669695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0.144824403882799,0,0,0,0.722878304769133,0,0,0,0.486634870302636,0.0945348171640679,0,0.087834785693126,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0.694281003215189,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0.163461903113459,0.151357427644931,0,0,0,0,0,0,0.161872944368132,0.140450806702248,0,0.122834317311768,0,0,0,0,0,0.168336113954066,0.250237039743928,0.554128230968366,0,0.30648779579902,0,0,0,0,0,0.300091096084402,0.206105058476878,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0.121973706129595,0.397589304964456,0.464775771478074,0.414644220061482,1.00928340350251,1.09493207722749,0,0,1.38134921352481,0,0,0.709840800239063,2.02301628093722,0.964044119533928,0.992645754591546,1.30727666455444,1.18635309555548,1.61797569792197,1.96221465125346,2.30848294167834,0,0,0,0,0,0,0,0.441463099414651,0.368965315629341,0.171567810298526,0,0,0.100528972411631,0,0,0,0,0.115930404975077,0,0.144366447761074,0,0,0.790204397959275,0,0,0,0,0,0,0,0.268675568108545,0.290633938513962,0,1.47798971368783,0.088048434013226,0,0,0,0.317489471460845,0,0,0,0.514137463516618,0,0.285826432630578,0.224262168690721,0,0.4400297149257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,1.12085143993527,0,0.215627574859517,0.256686072559497,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0.153461973288062,0,0,0,0,0,0.154209693802656,0.177561725313127,0,0,0.116210378459959,0.604297247958111,0,0,0.114814448164607,0,0,0,0,0,0,0,1.13733384070897,0.170093705276516,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,1.00726411300178,0.660075999364704,0,0,0,0,0.154048617114644,0,0,0,0,0.0852266274161009,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0.372158369359667,0.316379424718726,0.190630193923825,0,0,0,0,0.179872457583315,0.274537029736055,0.353437207037059,0,0,0,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0.329294892959902,0,0.349934720244983,0,0,0,0,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0.962479855263359,0,0,0.577076851905779,0.426851060090485,0.478278818186467,0,0.383010740264733,0.211673582723883,0,0,0,0.313359791546046,0,0.169291777801603,0.1605880751037,0,0.425846237690326,0,0,0,0,0.19538809540204,1.11362469558097,0,0,0.99921590399346,0,0.18714054040822,0,0,0.222886768554957,0.568272293612826,0,0,0,0,0,0,0,1.26675244876796,0,0,0,0.511343412510774,0.123084805461069,0,0.988551862620595,0.716084698702437,0,0,0,0,0,0,0,0.260427761085233,0,0,0.1137934482855,0,0.472775363535873,0,0,0.347249989866585,0,0,0,0,0,0,0.653630781113941,0.83654246567162,0,0.341826167541004,0,0.269272933229316,0,0.31900115973192,0.0915975934018623,0,1.02193298195737,0,0.166211681900156,0.225595660617181,0.588187602953219,0.335643173951685,0.37950746544837,0.794682894901893,0,0,0.424059214301822,0,0,0,0,0.889563386041866,0.247127877893006,0.104421949505455,0,0,0,0,0.782658475728359,0.242780379534093,0,0,0,0.063186579628488,4.81034942126376,0.933193722575224,0,0,0.313932918407225,0,0.569219092059585,0,0.173559738335131,0.783939179315021,0.69647365264322,0.17472666824203,0.51595809741485,0.967563312890852,1.16942907337897,1.14961639874493,0,0,0,0.137041924646751,0.397429223405979,0,0.782205530939212,0.0801588202515337,0,0.39961921916426,0,0.343609788497747,0,0,0.124252535565433,0,0.271808412147228,0.732219924186332,0.611989305817931,0,0,0,1.27746588066972,0,0.262887354279314,0,0,0,0,0,0,0.0671834724867263,0,0,0.630265458457789,0.906574442192831,0.539228350833479,0.688992370603241,0.76205998859206,0,0,0.482259445395058,0.275078873194468,0,0,0,0,0,0,0,0,0,1.91915197319445,0,0,0.5085370753095,0,0,0.326587360109409,1.19730191562487,0.082092520749339,0,0.679872549120754,0,0,0,0,0,0,0,0,0,0,0,0.487170393523584,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0.553394539744923,0.499921631848426,0.151649117541648,0,0.235265819698172,1.87333962322753,0.869526171664951,0,0.233713309847224,0,0,0,0,0.228840068396924,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0.214821114084977,0,0,1.20008329398946,0,0,2.52369796457302,0,0.857766365499703,0.521988583930423,0,0.231522474323834,0.734210113519403,0.179088841081487,0,0.438568099157414,0.353378291891762,0.192914038270915,0.168942440653073,0.256241518587947,0,0.607719912354764,0.138258436151731,0,0,0,0,0,0.422624246717254,0.19998739585493,0.320075189082423,0,1.13503190713367,0.368211900503681,0,0,0.639471856518258,0.539124056983409,0.157265941855896,0.218419276384028,0.169732529954025,0.425149840203366,0.247871528518004,0.558644917973244,0,0.157723490002507,2.40171224485641,0,0,0.128458450192919,0,0,0,0,0,0,0,0,0.707818340086442,0.183428598521679,0.577628330751691,0,0,0.397832444232549,0,0,0,0,0.818859587550484,0.887136517302272,0,0,0,0,0,0,0,0.175871244359621,0.127762427639595,0,0,0,0,0,0.115233987555779,0.171488009437418,0,0.0657727735628491,0.236387681767936,0.333694205676207,0,0,0.560544326627578,0,0.215927591218621,0,0,0.158013611732727,1.16241425368125,0.173858272302579,0,0,0,0,0,0.118332000730565,0.170426809518315,0,0.22910686854405,0,0,0,0.392600934460972,0.243835849964539,0,0,0,0,0.467878926924211,0.198950775161368,0.237840181555137,1.01651473835064,0,0.150962843566674,0.0771741581079447,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0.160482733378337,0,0,0,0.157771562193185,0.0679914901909147,0,0,0,0,0,0,0.109265571963696,0.126698501011437,0.101988829741982,0,0.275684698604535,0,0.0757786982182394,0.535928260312357,0,0,0,0,0,0.124149428591716,0.112131862580613,0,0,0,0,0,0.0717222053926763,0.332660356546013,1.54666210360852,0.426909383510862,0,0.179650404213174,0,0,0,0,0,0.320568492303233 | |||
|short_description=p3@CDC6 | |||
}} |
Revision as of 15:07, 20 January 2014
Short description: | p3@CDC6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CDC6_5end |
Coexpression cluster: | NA |
Association with transcript: | 59bp_to_NM_001254, uc002huj.1_5end |
EntrezGene: | CDC6 |
HGNC: | 1744 |
UniProt: | Q99741 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 1.91e-08 | 1 |
bladder cell | 3.11e-08 | 1 |
lower urinary tract cell | 3.11e-08 | 1 |
innate effector T cell | 8.12e-08 | 1 |
immature NK T cell | 8.12e-08 | 1 |
effector T cell | 8.12e-08 | 1 |
mature NK T cell | 8.12e-08 | 1 |
immature NK T cell stage IV | 8.12e-08 | 1 |
immature NK T cell stage I | 8.12e-08 | 1 |
immature NK T cell stage II | 8.12e-08 | 1 |
immature NK T cell stage III | 8.12e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
larynx | 4.23e-27 | 9 |
upper respiratory tract | 8.32e-17 | 19 |
respiratory primordium | 3.59e-13 | 38 |
endoderm of foregut | 3.59e-13 | 38 |
segment of respiratory tract | 9.05e-13 | 47 |
respiratory tract | 6.83e-11 | 54 |
urinary bladder urothelium | 3.11e-08 | 1 |
wall of urinary bladder | 3.11e-08 | 1 |
mucosa of urinary bladder | 3.11e-08 | 1 |
respiratory system | 1.72e-07 | 74 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 7.98e-10 | 106 |
cell type cancer | 6.40e-09 | 143 |