FFCP PHASE1:Hg19::chr19:54372639..54372646,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=91663 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7544 | |||
|TSSclassifier=strong | |||
|UniProt=Q96S97 | |||
|association_with_transcript=-13bp_to_ENST00000391769,NM_001020821,uc002qco.2_5end | |||
|description=CAGE_peak_24_at_MYADM_5end | |||
|id=chr19:54372639..54372646,+ | |||
|ontology_enrichment_celltype=CL:0000222!4.87e-10!119;CL:0000213!2.43e-07!57;CL:0000215!2.43e-07!57;CL:0000359!5.41e-07!32;CL:0000115!7.87e-07!35 | |||
|ontology_enrichment_celltype_v019=CL:0002594;1.54e-08;4!CL:1000746;1.67e-08;7!CL:1000612;1.67e-08;7!CL:0002262;1.71e-08;2!CL:1000398;1.71e-08;2!CL:0002188;3.66e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002262,9.21e-09,2;CL:1000398,9.21e-09,2;CL:0002594,2.14e-08,4;CL:1000746,2.77e-08,7;CL:1000612,2.77e-08,7;CL:0002188,3.86e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!1.25e-11!110;UBERON:0001009!1.69e-11!113;UBERON:0002049!5.33e-11!79;UBERON:0007798!5.33e-11!79;UBERON:0004872!1.21e-10!84;UBERON:0001981!1.43e-10!60;UBERON:0007500!1.43e-10!60;UBERON:0004537!1.43e-10!60;UBERON:0006965!1.43e-10!60;UBERON:0000055!2.66e-10!69;UBERON:0001637!3.99e-10!42;UBERON:0003509!3.99e-10!42;UBERON:0004572!3.99e-10!42;UBERON:0004573!2.05e-09!33;UBERON:0004571!2.05e-09!33;UBERON:0003914!2.46e-09!118;UBERON:0003081!1.09e-08!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0001310;1.54e-08;4!UBERON:0003513;1.67e-08;7!UBERON:0000074;1.67e-08;7!UBERON:0001229;1.67e-08;7!UBERON:0001281;1.71e-08;2!UBERON:0003497;1.71e-08;2!UBERON:0003909;1.71e-08;2!UBERON:0003835;1.71e-08;2!UBERON:0000353;3.11e-08;15!UBERON:0001851;4.52e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001281,9.21e-09,2;UBERON:0003497,9.21e-09,2;UBERON:0003909,9.21e-09,2;UBERON:0003835,9.21e-09,2;UBERON:0003513,1.48e-08,7;UBERON:0001310,2.14e-08,4;UBERON:0010532,2.77e-08,7;UBERON:0000074,2.77e-08,7;UBERON:0001229,2.77e-08,7;UBERON:0001230,2.77e-08,7;UBERON:0003220,2.77e-08,7;UBERON:0005749,2.77e-08,7;UBERON:0004199,2.77e-08,7;UBERON:0004209,2.77e-08,7;UBERON:0004198,2.77e-08,7;UBERON:0000353,3.51e-08,15;UBERON:0001851,6.26e-08,15;UBERON:0005103,2.99e-07,8;UBERON:0000083,2.99e-07,8;UBERON:0009201,2.99e-07,8;UBERON:0006553,2.99e-07,8;UBERON:0003074,2.99e-07,8;UBERON:0003060,2.99e-07,8 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.704772020479856,2.00146596706261,0.893922188854576,0,0,0.631719873426831,0.261185628199839,0.245733936501509,2.79120467188971,0.655324116390517,0,0.618831764800233,0,0.672325146451775,0.602694528023977,1.46062018077475,0.487932798790507,0.61560529038394,1.42800483870977,1.25381888591235,0.286235987131057,0.136874425072884,0.502170558379211,0,0,0,0.393364276848904,0,0.154816123316076,0,0.30120591877825,0,0,0.142169232487422,1.17440175733939,0,0,0.217010870715852,0.447830948479849,0,0,1.59938062657521,1.13362783106643,0.970336244751265,0.464858073811369,0,0.309706370895104,0.28769239232215,0.256160706529101,0,1.37898272294647,0,0,0.376484679085209,0.818718450173537,0.449446968890169,0.918251677112708,0.320929027076094,1.91801137739712,0.989553900560148,0.199463657621632,1.27867425159808,0.870627715885752,0.56738522469114,1.24564449799115,0.251248665256743,0,0,0,0.736555271975129,0.949387162322653,0,0,0.209658645508376,0.112328631146495,0.300353785683013,0.32145117339416,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,2.64342657158052,0.560508562981536,1.05353633910031,0.786839080455332,0.393010762749165,0.205601498999509,0,0,0,0,0.334231370655521,0,0,0,0.128091319725675,0.260118695119756,0.164437904603676,0,0.289803085735052,0.593146252648242,0.267540828089713,0,0.339928028092699,0.383220493601921,0,0,0,0.651083453856419,0,0.150575119077773,0.127986611154418,0,0.236777252044017,0.821127996921047,0.201606743224732,0,0.289648807765598,0,0,0.255725123687061,0,0,0,0,0,0.378139268656271,0.886917589850256,0.263504357079378,0.130979075497713,0,0,0.324547393654683,0,0,0.715471872916026,0,0,0.198762407366705,0.860234595106124,0.694281003215189,0.56530794192401,0.419499436209906,0.550236083880135,0.208994966536811,0.516833518338658,0.35576626268671,0.33472061276467,0.805658634218294,0,0.976248230192678,1.10298924103761,0.81014194788176,0.535798369704479,0,0.450445921933289,0,0.949265659568129,0.366403487860815,1.31780417436063,0,0,0.496971951695318,0.379891534993739,0.132409180813219,0.286836620748814,0.709336764396714,0.560677600142307,1.06748995729705,0.24666754841716,0.311211035399766,0.404132016209064,0.817309515567294,0.454072282934794,0,0.468642863667593,0,0.570471821544449,0.149448680551801,0,0.161872944368132,0,0.204154171254893,0,0,0,0.247266929278557,0,0,0,0.375355559615893,0,0.438977620880838,0,0,0.226864366320042,0.179389635688862,0.213557388818567,0.635795703478686,0,0.103052529238439,0,0,0.337552664482532,0.584622030967192,0,0.184099797284599,0,0,0.403008392910561,0.169560592310488,0,0,0,0.365921118388786,0.132529768321485,0.69716365721711,0.207322110030741,0.252320850875628,0,0,0,0,0.928735856063958,0,0.236613600079688,0,0,0.441175890929576,0.217879444092406,0,0.134831308160164,0.196221465125346,0.38474715694639,1.4763109092493,2.80483547606892,0,1.47008711385542,0,0,0,0,0,0.171567810298526,0,0,0.100528972411631,0.0925884451585296,0.977424915930974,0,0,0.115930404975077,0.587043471179108,0.288732895522148,0.462985512576611,0.570762456703795,0,0,0,0,0,0,0.335964256397719,0,0.0895585227028483,0,0,0.492663237895943,0.352193736052904,0.621984346622316,0.720599767084807,0.6312121671319,0.063497894292169,0,0,0,0,0,0.285826432630578,0.560655421726804,0.87192013766656,0.1466765716419,0.258543431515556,0,0,0.797814349754612,0,0,0,0.799266537048298,0,1.08524321078289,0,0,0,0,0.602878754119172,1.74306691720059,0.199945982364114,0,0,0,0,0,0,0.579125226670317,0.205476322550383,0.179060963239896,0.224170287987055,0.197030760201927,0.215627574859517,0.128343036279748,0.254094624222463,1.30139853857622,0,0.167516265334349,0,0.749007023947182,0,0.414415513436035,0.736148950314839,0,0,0.207970861530807,0.178428988797162,0.315404830067869,0.117141414992713,0,0,0,0,1.47495334833363,0,0.783204629850962,0,0.206768026122887,0,0.106727557803444,0,1.66435439510497,0.604780586659361,0,0.153461973288062,0.841980283299221,0.128139149255701,0,0.64341568457443,0,0,0.710246901252508,0.739144404124282,0,0.232420756919918,0,0.200506470303285,0,0.229628896329213,0.182091168006717,0,0.451199612907412,0.15403067420883,0,1.46139224653261,0.422206515571503,0,1.02056223165909,0.215915916102139,1.54227252690289,0.812839312631559,1.00337954770971,0.254876273045038,0,0,0,0,0,0.656029291399411,0.325378394664303,0,0.183138929636687,0.577566499444116,0,0,0,0.386682873168488,0.154048617114644,0.15350367472613,0.413509717453592,0.107420244868274,0,0.170453254832202,0.623224249527161,0.165284915360978,0,0,0,0,0.94443704049192,0.6970372701606,0.924100740528266,2.12922412126809,0.869932992075073,0.55597265731176,0.572499546967965,0,0,0.190630193923825,0,0,0.636406495851874,0.78494864019923,0,0.274537029736055,0,1.61745985258653,0,0.842516912477962,0.48763373908959,0.487426979262569,0,0,0,0,1.10273068709225,1.32687795048244,0.876901770507525,0.578775534266688,0,1.42037263873893,1.239293992399,0,0.286822704408103,0.589494246078727,1.07001315444375,0.354761064070598,0.211107635297664,0.329294892959902,0.75894634753143,1.04980416073495,0.192444225451024,0,0,0,0,0,0.443430153536676,0.229723400206959,1.01489521846434,0,0.569647187174163,0.476463550915578,0,0,0.540031437238115,0,0.106824071127473,0,0,0,0.721346064882224,0,2.39139409093234,0.59873811429845,0,2.54008299268659,0.649243880549111,1.12318871245384,0.228234679033192,0.626719583092093,0,0.338583555603207,0,0.403599414382095,0,0,0.307240764308458,0,0.834245708559542,0.586164286206121,0,0,1.89318974933188,1.33228787199128,0,0,0,1.09224469574562,0,0.284136146806413,0.47748896947538,0.296964680832639,0.307160702099232,0,0,0.445234820091624,0.329607748453519,0,0,0.276283915531148,0.755798243562828,0.409074730008619,0.369254416383208,0.311039587661807,0.179736702294654,0,0,0,0,0,0,0,0,0,0.262379999988587,0,0.1137934482855,0.254253650292766,0.472775363535873,0,0.583209226766509,0.694499979733169,0,0.241192877250816,0,0,0,0,0,0,0.230850775511391,0.113942055847001,0,0.0897576444097721,0.108647371922008,0.31900115973192,0,0,1.02193298195737,0.31396051279005,0.166211681900156,0.225595660617181,0.19606253431774,0.335643173951685,0.189753732724185,0.635746315921515,0.210998064528027,0,0.141353071433941,0,0,0.0884575645033392,0,0.296521128680622,0.370691816839509,0.730953646538188,0,0,0,0,0.391329237864179,0.242780379534093,0,1.20990716048664,0.61214552326098,0,0.300646838828985,0.207376382794494,0,0,0.313932918407225,0,0.569219092059585,0.277349346026277,0.347119476670262,0,0,0,0.51595809741485,0,0,0,0,0.706049013532002,0.451961481561065,0,0.19871461170299,0.126621591911757,0,0.480952921509202,0,0.39961921916426,0.288180834308212,3.32156128881155,1.02956998717179,0,0.124252535565433,0,0.951329442515298,1.15063130943567,0.611989305817931,0,0,0.136905378891993,0,0,0,0.558564802544508,0.229160424011684,0,0,0.429226048136571,0.223171457441873,0.268733889946905,0,0,0.315132729228895,0.329663433524666,0.202210631562555,0.393709926058995,0,0,0.272406812223151,0.321506296930038,0.550157746388935,0,0,0,0.121499113316049,0,0.0788057072991982,0.367182116944987,0.211200673038813,0,0,0.714695326373367,0,1.5256112259285,0,0,0.326587360109409,0,0.82092520749339,0.511164065356265,0.226624183040251,0.146552233678082,0,0.258565912723101,0,0.684347351537318,0.704815022316672,0.106787412567695,0.314408610199332,0,0.496166021811951,0,0,0,0,0,0,0,0.157054096250234,0,0.122026264901963,0,0.573409195690071,0,0.124192805882767,0,0.124980407962107,0.151649117541648,0,0,0,0,0.149254802886874,0.233713309847224,0,0,0,0,0.228840068396924,0.604923695052956,0.466311601748341,0.295710299979268,0.318593534327405,1.34940933649081,0.310525913752519,0.829412415681711,0,0,0.300515217994437,0.380805212168795,0,0.181848659202559,0.322231671127465,0,1.19428766609585,0.400027764663154,0.343395705182793,0,2.52369796457302,0.192619830407303,1.50109113962448,0.521988583930423,0.453411851024545,0,0,0,0.617602894321944,0.219284049578707,0.353378291891762,0.771656153083659,0.168942440653073,0.512483037175893,0,0,0,0,0.132864840313363,0.163565394255844,0.327609848846413,0,0,0.19998739585493,0.426766918776564,0,0,0,0.279759015438889,0,0.127894371303652,0.107824811396682,0.157265941855896,0.218419276384028,0.33946505990805,0.425149840203366,0.495743057036009,0.558644917973244,0.318004350653419,0.94634094001504,0,0,0,0.0642292250964595,0,0.159633859057151,0,0,0.0691572524642179,0.645902582527404,0,0.392590874004102,0,0.183428598521679,0,0,0,0.198916222116275,0.0752103283492573,0.20170506870352,0,0.261906694481422,0,0.739280431085226,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0.527613733078862,0.511049710558381,0,0,0.606965604236632,0,0,0.115233987555779,0,0,0,0.236387681767936,1.33477682270483,0.078493092850514,0,0,2.73947616152849,0.647782773655864,0,0.0714765441766563,0.158013611732727,0.813689977576877,0.869291361512897,0,0,0.17071847709395,0,0,0,0.255640214277473,0,0.9164274741762,0,0,0.111855431797792,0,0,0,0,0,0.485710993059139,0,0.994753875806841,0.356760272332706,0,0,0.150962843566674,0.231522474323834,0,0,0,0.235676547101626,0.588925401344836,0,0,0.169927114687817,0,0.580120991762195,0,0.178553938605658,0.352894871715692,0,0,0,0,0.946629373159108,0.203974470572744,0,0,0,0,0.432626562123789,0.126166424835079,0.546327859818478,0,0,0,0.0918948995348449,0,0.151557396436479,0.267964130156178,0,0,0,0,1.93766729508018,0.682821857254437,0.448527450322454,0.190941474834495,0.202117188958219,0.217716747896961,0,0.404112318087525,0.215166616178029,0,0.569822880276821,0,0,0.0898252021065869,0,0,0.406896178315738,0,0,0 | |||
|short_description=p24@MYADM | |||
}} |
Revision as of 00:58, 21 January 2014
Short description: | p24@MYADM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_24_at_MYADM_5end |
Coexpression cluster: | NA |
Association with transcript: | -13bp_to_ENST00000391769, NM_001020821, uc002qco.2_5end |
EntrezGene: | MYADM |
HGNC: | 7544 |
UniProt: | Q96S97 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of sinusoid | 9.21e-09 | 2 |
endothelial cell of hepatic sinusoid | 9.21e-09 | 2 |
smooth muscle cell of the umbilical artery | 2.14e-08 | 4 |
glomerular cell | 2.77e-08 | 7 |
kidney corpuscule cell | 2.77e-08 | 7 |
glomerular endothelial cell | 3.86e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
hepatic sinusoid | 9.21e-09 | 2 |
abdomen blood vessel | 9.21e-09 | 2 |
sinusoid | 9.21e-09 | 2 |
abdominal segment blood vessel | 9.21e-09 | 2 |
trunk blood vessel | 1.48e-08 | 7 |
umbilical artery | 2.14e-08 | 4 |
primitive nephron | 2.77e-08 | 7 |
renal glomerulus | 2.77e-08 | 7 |
renal corpuscle | 2.77e-08 | 7 |
glomerular capsule | 2.77e-08 | 7 |
metanephric mesenchyme | 2.77e-08 | 7 |
glomerular tuft | 2.77e-08 | 7 |
S-shaped body | 2.77e-08 | 7 |
renal vesicle | 2.77e-08 | 7 |
comma-shaped body | 2.77e-08 | 7 |
parenchyma | 3.51e-08 | 15 |
cortex | 6.26e-08 | 15 |
mesonephric epithelium | 2.99e-07 | 8 |
mesonephric tubule | 2.99e-07 | 8 |
nephric duct | 2.99e-07 | 8 |
renal duct | 2.99e-07 | 8 |
mesonephric duct | 2.99e-07 | 8 |
pronephric duct | 2.99e-07 | 8 |