FFCP PHASE1:Hg19::chr20:31560306..31560318,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C22 | |||
|description=CAGE_peak_at_chr20:31560306..31560318,+ | |||
|id=chr20:31560306..31560318,+ | |||
|ontology_enrichment_celltype=CL:0000838!2.10e-57!52;CL:0000542!4.62e-56!53;CL:0000051!4.62e-56!53;CL:0000037!7.54e-43!172;CL:0000566!7.54e-43!172;CL:0000988!5.68e-42!182;CL:0000738!5.12e-39!140;CL:0002032!7.72e-38!165;CL:0000837!7.72e-38!165;CL:0002087!1.84e-34!119;CL:0002031!1.01e-32!124;CL:0000084!8.52e-32!25;CL:0000827!8.52e-32!25;CL:0000791!1.08e-26!18;CL:0000789!1.08e-26!18;CL:0002420!1.08e-26!18;CL:0002419!1.08e-26!18;CL:0000790!1.08e-26!18;CL:0000945!6.67e-21!24;CL:0000826!6.67e-21!24;CL:0000236!3.24e-15!14;CL:0000625!4.18e-14!11;CL:0000624!9.36e-13!6;CL:0000134!5.50e-11!358;CL:0002320!1.99e-10!365;CL:0000219!1.74e-08!390;CL:0000623!1.29e-07!3;CL:0000825!1.29e-07!3;CL:0000767!4.16e-07!3;CL:0000080!4.75e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000084;5.73e-31;25!CL:0000791;2.10e-29;18!CL:0000789;2.10e-29;18!CL:0002419;2.10e-29;18!CL:0000542;7.77e-26;53!CL:0000623;1.88e-21;3!CL:0000624;1.10e-18;6!CL:0000236;1.02e-12;13!CL:0000625;3.03e-10;11!CL:0000767;1.12e-09;3!CL:0002127;7.09e-08;1!CL:0000911;7.09e-08;1!CL:0000895;7.09e-08;1!CL:0000814;7.09e-08;1!CL:0002087;2.30e-07;104!CL:0000738;3.12e-07;136!CL:0000945;8.64e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,2.40e-43,52;CL:0000542,1.86e-42,53;CL:0000051,1.86e-42,53;CL:0000084,5.19e-31,25;CL:0000827,5.19e-31,25;CL:0000791,2.22e-29,18;CL:0000789,2.22e-29,18;CL:0002420,2.22e-29,18;CL:0002419,2.22e-29,18;CL:0000790,2.22e-29,18;CL:0000738,3.38e-26,136;CL:0000037,3.00e-22,168;CL:0002087,1.13e-21,115;CL:0000623,2.24e-21,3;CL:0000825,2.24e-21,3;CL:0000988,6.93e-21,177;CL:0002031,1.43e-20,120;CL:0002032,2.06e-19,161;CL:0000837,2.06e-19,161;CL:0000624,8.63e-19,6;CL:0000893,5.28e-14,2;CL:0002489,5.28e-14,2;CL:0000809,5.28e-14,2;CL:0000808,5.28e-14,2;CL:0000894,5.28e-14,2;CL:0000806,5.28e-14,2;CL:0000807,5.28e-14,2;CL:0000805,5.28e-14,2;CL:0002425,5.28e-14,2;CL:0000236,7.96e-12,14;CL:0000625,3.11e-10,11;CL:0000767,1.52e-09,3;CL:0000134,4.74e-08,354;CL:0000810,5.40e-08,1;CL:0000895,5.40e-08,1;CL:0002436,5.40e-08,1;CL:0002427,5.40e-08,1;CL:0002428,5.40e-08,1;CL:0002429,5.40e-08,1;CL:0002433,5.40e-08,1;CL:0002431,5.40e-08,1;CL:0002432,5.40e-08,1;CL:0002320,8.46e-08,361;CL:0002127,1.06e-07,1;CL:0000914,1.06e-07,1;CL:0000911,1.06e-07,1;CL:0000814,1.06e-07,1;CL:0002042,1.06e-07,1;CL:0002039,1.06e-07,1;CL:0002040,1.06e-07,1;CL:0002041,1.06e-07,1;CL:0000219,6.52e-07,386;CL:0000945,8.32e-07,24;CL:0000826,8.32e-07,24 | |||
|ontology_enrichment_development_v019=CL:0000790;2.10e-29;18!CL:0000051;7.77e-26;53!CL:0002425;4.61e-14;2!CL:0002427;7.09e-08;1 | |||
|ontology_enrichment_disease=DOID:2531!4.18e-14!51;DOID:0060083!4.18e-14!51;DOID:1240!1.09e-10!39;DOID:0060058!8.66e-08!10 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!9.86e-13!7;UBERON:0002384!1.14e-09!375;UBERON:0002370!2.07e-08!4;UBERON:0005058!2.07e-08!4;UBERON:0009113!2.07e-08!4;UBERON:0003295!2.07e-08!4;UBERON:0005562!2.07e-08!4 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.87e-07,371;UBERON:0002370,1.94e-07,4;UBERON:0005058,1.94e-07,4;UBERON:0009113,1.94e-07,4;UBERON:0003295,1.94e-07,4;UBERON:0005562,1.94e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.164201178899891,0,1.18009283054671,1.15148819429164,0.928896739896456,0,0,0,0.0774672005803016,0.284338464974843,0,0,0.802177789880567,1.51907609501096,0.223915474239924,0.32389366601898,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0.426224750532694,0,0,0,0,0,0,0,0,0,0,0,0.209658645508376,0,0,0,0,0,0.182664153764634,3.51992488922645,0,0,1.28019066769952,0.400395987036012,1.14950487990897,0.661044872784862,0,3.41527781465669,0.587237189370939,1.91136614062614,1.32171328579026,0,0,5.31116379307349,7.8602152549833,3.49522548299166,0.334372990781356,0.32592226663359,0.473447805734733,0,1.55974639639243,0.589211814949674,0.886135578334485,0.270803863765016,0.640456598628376,0.390178042679635,0.493313713811028,0.829050053357545,0.579606171470105,1.03800594213442,0.535081656179426,0,0.226618685395132,1.53288197440768,0.34362744548263,0.253019692019503,0,0.651083453856419,0.950452044448374,0.301150238155546,0.383959833463255,1.24930726552346,0.710331756132051,0,4.83856183739358,5.08136371988664,4.19990771260117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0.571994910780128,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.20731549707325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621984346622316,1.29707958075265,0.50496973370552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12085143993527,2.1673383622212,3.23441362289276,5.00537841491019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,1.94142780736755,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0.238231775457789,0,0,0,0.79312517629427,0,0,0,0,0.432807638929335,0.924843963529383,1.75368900001705,0.199579371432817,0,0.423347165447766,0.324621940274555,0,0,0.156679895773023,0,0,0.1605880751037,1.00899853595524,0,0.343505344755765,0,0,0,0.19538809540204,0,0,0,0.33307196799782,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246169610922139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04386596391473,0.156980256395025,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0.123563938946503,0.104421949505455,0,0,0,0.182454789215666,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0.375935671919414,0.0644578879735772,0.599646935549574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0,0,0,0.258355639344024,0.558672428662721,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0.641136984606466 | |||
|short_description=p@chr20:31560306..31560318,+ | |||
}} |
Revision as of 10:47, 21 January 2014
Short description: | p@chr20:31560306..31560318, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:31560306..31560318, + |
Coexpression cluster: | C22_CD4_CD8_Natural_Basophils_CD14_Peripheral_CD19 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.87e-07 | 371 |
thymus | 1.94e-07 | 4 |
hemolymphoid system gland | 1.94e-07 | 4 |
thymic region | 1.94e-07 | 4 |
pharyngeal gland | 1.94e-07 | 4 |
thymus primordium | 1.94e-07 | 4 |