FFCP PHASE1:Hg19::chr20:44034639..44034674,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55861 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15881 | |||
|TSSclassifier=strong | |||
|UniProt=Q9BQY9,Q5QPV4 | |||
|association_with_transcript=0bp_to_NM_001048221,NM_001048222,uc002xnz.2,uc002xoa.2_5end | |||
|description=CAGE_peak_7_at_DBNDD2_5end | |||
|id=chr20:44034639..44034674,+ | |||
|ontology_enrichment_celltype=CL:0000066!7.64e-08!254;CL:1000497!1.15e-07!18;CL:0002518!1.15e-07!18;CL:1000507!3.62e-07!12;CL:1000494!3.62e-07!12;CL:1000449!5.73e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:1000507;8.42e-12;10!CL:1000494;8.42e-12;10!CL:1000497;3.75e-11;17!CL:0002518;3.75e-11;17!CL:1000449;1.04e-10;15!CL:0002681;1.46e-07;12!CL:0002584;1.46e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,3.91e-12,10;CL:1000494,3.91e-12,10;CL:1000497,1.94e-11,17;CL:0002518,1.94e-11,17;CL:1000449,5.38e-11,15;CL:0002681,1.11e-07,12;CL:0002584,1.11e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.11e-14!115;UBERON:0000064!5.12e-13!219;UBERON:0000489!6.72e-10!32;UBERON:0003075!9.89e-10!86;UBERON:0007284!9.89e-10!86;UBERON:0002346!1.76e-09!90;UBERON:0002113!2.64e-08!27;UBERON:0003918!2.64e-08!27;UBERON:0005095!2.64e-08!27;UBERON:0007687!2.64e-08!27;UBERON:0001049!4.59e-08!57;UBERON:0005068!4.59e-08!57;UBERON:0006241!4.59e-08!57;UBERON:0007135!4.59e-08!57;UBERON:0000080!1.12e-07!18;UBERON:0002120!1.12e-07!18;UBERON:0004875!1.12e-07!18;UBERON:0005721!1.12e-07!18;UBERON:0005754!1.12e-07!18;UBERON:0007297!1.12e-07!18;UBERON:0001008!1.13e-07!45;UBERON:0000062!1.47e-07!511;UBERON:0003064!1.72e-07!37;UBERON:0006554!1.74e-07!44;UBERON:0004876!1.81e-07!20;UBERON:0003103!2.77e-07!69;UBERON:0006555!2.96e-07!17;UBERON:0005103!2.96e-07!17;UBERON:0000083!2.96e-07!17;UBERON:0009201!2.96e-07!17;UBERON:0004819!2.96e-07!17;UBERON:0006553!2.96e-07!17;UBERON:0003074!2.96e-07!17;UBERON:0003060!2.96e-07!17;UBERON:0009773!3.62e-07!12;UBERON:0001231!3.62e-07!12;UBERON:0004810!3.62e-07!12;UBERON:0000481!3.82e-07!347;UBERON:0005743!4.49e-07!86;UBERON:0004211!5.73e-07!16;UBERON:0001285!5.73e-07!16;UBERON:0007684!5.73e-07!16;UBERON:0003220!5.73e-07!16;UBERON:0004208!5.73e-07!16;UBERON:0003887!6.00e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;8.42e-12;10!UBERON:0009773;8.42e-12;10!UBERON:0001231;8.42e-12;10!UBERON:0004810;8.42e-12;10!UBERON:0006555;1.04e-10;15!UBERON:0004819;1.04e-10;15!UBERON:0001285;1.04e-10;15!UBERON:0007684;1.04e-10;15!UBERON:0000489;5.64e-10;29!UBERON:0002113;9.56e-10;24!UBERON:0011143;9.56e-10;24!UBERON:0006554;2.51e-08;30!UBERON:0001008;2.51e-08;30!UBERON:0001225;1.46e-07;12!UBERON:0008987;1.46e-07;12!UBERON:0001851;5.01e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,3.91e-12,10;UBERON:0004211,5.38e-11,15;UBERON:0009773,5.38e-11,15;UBERON:0001231,5.38e-11,15;UBERON:0001285,5.38e-11,15;UBERON:0007684,5.38e-11,15;UBERON:0004208,5.38e-11,15;UBERON:0007023,6.74e-11,114;UBERON:0000489,1.42e-10,31;UBERON:0002113,2.85e-10,26;UBERON:0003918,2.85e-10,26;UBERON:0011143,2.85e-10,26;UBERON:0005095,2.85e-10,26;UBERON:0007687,2.85e-10,26;UBERON:0006555,4.05e-10,16;UBERON:0004819,4.05e-10,16;UBERON:0003103,1.02e-09,68;UBERON:0001225,1.11e-07,12;UBERON:0008987,1.11e-07,12;UBERON:0006554,3.69e-07,47;UBERON:0001851,4.16e-07,15;UBERON:0001008,6.61e-07,48 | |||
|phase1_expression=1.45342703416445,0.214100523890983,0.140954404095971,2.00146596706261,0.446961094427288,0.872338524100369,0,0,0,0.737201809504527,1.39560233594486,0.873765488520689,2.11013582582763,0,0,0,0,0,0.487932798790507,0.738726348460727,0.204000691244253,1.25381888591235,1.43117993565528,0.547497700291537,0.87879847716362,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0.293600439334847,0,0,0,0.223915474239924,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0.111410456885174,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0.766440987203842,0,0.253019692019503,0,0,0,0.150575119077773,0.127986611154418,0,0.236777252044017,0,0.201606743224732,0,0.144824403882799,0,0,0,0.722878304769133,1.50401373190767,0.289693037921647,0,0.486634870302636,0.189069634328136,0.221729397462564,0.527008714158756,0.982343066232845,1.45718115317017,2.59549109949101,0,0,0,0,0,0,0,0.860234595106124,0,0,1.67799774483962,0.550236083880135,0.417989933073621,0.258416759169329,0,0,0.402829317109147,0.760272105718513,0,0,0,0.0892997282840798,0.44905874525234,0.337834441449967,0,0,0.366403487860815,0,0,0.436094052142534,2.48485975847659,0.12663051166458,0,0.286836620748814,0.354668382198357,2.80338800071154,0,0.49333509683432,0,0.134710672069688,0,0.151357427644931,0,0.468642863667593,0,1.1409436430889,0,0.117434498643765,0,0.140450806702248,0,0.61417158655884,0.103325781175765,0,0.494533858557114,0,0,0.168336113954066,0.125118519871964,1.10825646193673,0.438977620880838,0.30648779579902,0.600952235626387,0.113432183160021,0.179389635688862,0,0.211931901159562,0,0,0.257640540045629,0.744467425326359,0.168776332241266,0.292311015483596,0,0.276149695926898,0.80823028409406,0,0.201504196455281,1.18692414617341,1.73934767846967,0.545492241181669,0.286804595389004,1.58565817968474,0.662648841607426,1.04574548582567,0.310983165046111,0.756962552626885,0,0,0,0,0,0,0.118306800039844,0,0,0.220587945464788,0.217879444092406,0,0.134831308160164,0,0,0,0,0.8231480226628,0,0,0,0,0.441463099414651,0.491953754172454,0,0.109750285408626,1.1240175325762,0.603173834469785,0.185176890317059,0.977424915930974,1.03993478527958,0,0.579652024875384,0.117408694235822,0.433099343283221,0.462985512576611,0.380508304469197,0.790204397959275,0.858486162094873,0.246217006087397,0.234004265139238,0.445893486866185,0,0.503946384596579,0,0.0895585227028483,0,0,0,0.088048434013226,0,0,0.50496973370552,0.063497894292169,0.381988425558278,0,0,0.205654985406647,0.300343057843917,0,0.448524337381443,0,0.1466765716419,0.129271715757778,0,0,0.797814349754612,1.04007436911366,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0.299918973546171,0,0,0,0.958499421966331,3.44585807502342,0,0,0,0,0.112085143993527,0.197030760201927,0.215627574859517,0.385029108839245,0.508189248444927,0,0,0.837581326671744,3.82763250991898,0,0,0,0,0,0.271265023699736,4.57535895367776,1.42743191037729,3.31175071571263,1.28855556491985,0,2.27407504055985,0,0,0.553107505625109,0.434418072340414,0.195801157462741,0.343143423810856,0,0.215714200818617,0,0.909382714338778,1.66435439510497,0.30239029332968,0.992431231275107,0.920771839728375,1.68396056659844,0.384417447767103,2.04682899626681,0.64341568457443,0,0,0,0.410635780069046,0,0.116210378459959,0.241718899183244,0,0,0.68888668898764,0.728364672026868,0.262248829918848,5.41439535488894,0.693138033939733,2.35304930753057,2.92278449306521,1.58327443339314,3.4120015221269,0.510281115829547,0.215915916102139,0,1.89662506280697,3.51182841698397,3.3133915495855,3.3243040357149,3.1342465661105,0,0,1.02580050046556,1.64007322849853,0.650756789328606,0.824328093181778,0.732555718546747,0.247528499761764,0,0.650060246036521,0,0.096670718292122,0,0,0.137836572484531,0.107420244868274,0,0.0852266274161009,0,0.661139661443912,0.384380134730212,0,0.30347334256665,0,0,0,0.308033580176089,0.532306030317022,0,0.37064843820784,0.143124886741991,0,0,0,0,0.42793898803392,0,0,0,0.274537029736055,0,0.606547444719948,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0.202910376962704,0.30982349809975,0,0,0.0982490410131212,1.07001315444375,0.354761064070598,1.89996871767898,3.29294892959902,0.75894634753143,0,0.192444225451024,0,0,0.470719003883896,0.86101074534246,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0.106824071127473,4.81239927631679,0.735120647943095,0,0,0.355709216742071,0.956557636372934,0,0,0,0,0,0,0,2.50634477090067,0,0,0,0,0.343505344755765,0,0.223676107892416,0,0,0.556812347790485,0,0,0,0,4.30423242938906,0.73254089635947,1.21360521749513,0,0.284136146806413,0.47748896947538,0,0.307160702099232,0,0.422008249231538,2.89402633059555,0,1.05562704063997,2.78947183551498,0.828851746593443,0,0,0,0,2.51631383212515,0.358042349351218,0,3.15658898038188,0,1.11136990144637,0.969332746095218,1.11321717794222,0,0,0,1.44999915086959,1.0241410345695,0,0,0,0,0.868124974666461,0,0.361789315876224,0,1.76926815889959,3.54657142744257,3.29078095730959,0.21787692703798,0.278847488557207,2.46240827212151,0.113942055847001,0,0.0897576444097721,1.52106320690811,0.638002319463839,0.183195186803725,0.533034776018635,0,0,0,0,0,0.167821586975843,0,0,1.05499032264014,0.326465616318295,0.424059214301822,0.216388639742091,5.97157158647103,1.41532103205343,5.49927130440263,0.296521128680622,0.617819694732514,0.522109747527277,1.95463285643963,1.60515529459758,2.81117334870407,0,0.391329237864179,0.971121518136371,1.18375320854817,0,0.30607276163049,0.189559738885464,0.150323419414493,1.65901106235595,0,2.64793564700399,0.627865836814451,0,0.284609546029793,5.26963757449927,0.347119476670262,0.783939179315021,1.13176968554523,0.873633341210151,3.0957485844891,0.19351266257817,0.219267951258557,0.164230914106418,3.20063754411784,0.970817393606503,0.225980740780532,0.822251547880505,1.9871461170299,0.886351143382302,0.195551382734803,0.480952921509202,2.13452994739353,2.79733453414982,0.432271251462318,1.37443915399099,3.43189995723929,0.864328787928898,2.23654564017779,0.235694034616795,0.407712618220842,0,0.203996435272644,0,1.20084057741958,1.36905378891993,0,0.429765441419957,0,1.11712960508902,1.83328339209347,0.717873024576814,2.79550600698588,3.43380838509257,2.00854311697685,2.21705459206197,1.08089965062721,0,0.630265458457789,0.576911008668165,0.26961417541674,0,0,0,0.681017030557878,0.482259445395058,0.412618309791701,2.07720169014593,0,0,1.03274246318642,0,0.472834243795189,0.734364233889974,2.00640639386872,0,2.30298236783334,0.714695326373367,3.97255182219259,0,1.08599920350743,0,0.326587360109409,0,0.164185041498678,0,0.679872549120754,0.146552233678082,0,0.904980694530854,0.66116300871345,0.513260513652988,0.704815022316672,0.961086713109252,0.157204305099666,2.89967338743037,0.496166021811951,0,0,0,0,0,0,0.327872630709804,0.314108192500469,0,0.366078794705889,0.500763722825999,3.44045517414043,0.887432412294818,1.30402446176905,0.415045904808692,0,0,0,1.17632909849086,0,0.144921028610825,0,0,0.554805861502613,0.189403005275089,0.754703705257725,0.889811221596536,0,0.151230923763239,0,0.295710299979268,0,0,0.155262956876259,0.414706207840855,0,0.521745061811734,0,0.380805212168795,0,0,0.214821114084977,0.464033759878494,0,0,0,0,2.52369796457302,0.963099152036517,0,2.3489486276869,0.453411851024545,0.694567422971502,3.42631386309055,0.895444205407437,2.77921302444875,0.219284049578707,2.12026975135057,0.38582807654183,0.844712203265363,2.04993214870357,4.49059444250558,0,0.276516872303462,0.194860308839388,0.531459361253452,0.817826971279221,0.655219697692825,0,0.211312123358627,0,0,0,0,0,0,0.622077260032973,0,0.107824811396682,0,0.655257829152084,0.33946505990805,0,0.619678821295011,0,0,0,0,0.352675943690684,0,0.834979926253974,0,0.638535436228605,0.82046545696302,0.252071696221718,0.622415272177961,0.322951291263702,0,0.0981477185010256,1.76954585021611,0.183428598521679,0.231051332300676,0.762764190934334,1.3807198521202,0.397832444232549,1.65462722368366,0,0,0,2.62035068016155,0.147856086217045,0.675375846183947,0.781078098613847,0.620060389503552,0.634158101939068,1.09394961803644,0,3.96968942711435,0.175871244359621,2.17196126987312,0,0.336283722218824,0,0.455324382702595,0.709618961301111,0,0,1.2914249265598,0.591954962065642,0.945550727071746,2.55832224351759,2.27629969266491,0.314231179832004,1.12108865325516,1.82631744101899,4.96633459802829,0.47775168788705,1.28657779517981,0,0.348724276104376,0,0,0,0.17071847709395,0.691259661814092,0,0.236664001461131,0.0852134047591577,1.27016115057279,0.4582137370881,0.62041277132864,0.955538938977433,0,0.490751168076215,0.609589624911347,1.29485767437579,0.923965261706223,0,2.4285549652957,4.2109103423179,0.795803100645473,0.118920090777569,0.22589216407792,0.109940516745429,0.301925687133347,1.15761237161917,0.218559560503957,0,3.67722482630858,0,0.981542335574726,0.297046400327086,1.6906229103336,0.849635573439084,0.469919589899268,0.45120521581504,0,0.357107877211315,1.05868461514708,0,1.46067277649303,0,1.14671666521161,0.157771562193185,0.679914901909147,0.436350690340377,1.5870805215462,0,0.462175628631418,0.865253124247578,0.504665699340316,0,0.253397002022874,0,0,0.18378979906969,0,1.13668047327359,0.267964130156178,0.829169439458779,1.03432995861895,1.27940389140589,0.714193294391221,0.387533459016037,0.31037357147929,7.96136224322355,0.700118741059814,0.404234377916439,1.08858373948481,1.02669990325584,0.740872583160463,0.932388670104793,1.33064142618405,0.89543595472072,1.06727345877715,0,5.65898773271497,0,2.07810455110873,1.22068853494722,0.665756774185513,1.40891655513718,0 | |||
|short_description=p7@DBNDD2 | |||
}} |
Revision as of 11:30, 21 January 2014
Short description: | p7@DBNDD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_DBNDD2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_001048221, NM_001048222, uc002xnz.2, uc002xoa.2_5end |
EntrezGene: | DBNDD2 |
HGNC: | 15881 |
UniProt: | Q9BQY9Q5QPV4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 3.91e-12 | 10 |
nephron tubule epithelial cell | 3.91e-12 | 10 |
kidney cell | 1.94e-11 | 17 |
kidney epithelial cell | 1.94e-11 | 17 |
epithelial cell of nephron | 5.38e-11 | 15 |
kidney cortical cell | 1.11e-07 | 12 |
renal cortical epithelial cell | 1.11e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
nephron tubule epithelium | 3.91e-12 | 10 |
nephron epithelium | 5.38e-11 | 15 |
renal tubule | 5.38e-11 | 15 |
nephron tubule | 5.38e-11 | 15 |
nephron | 5.38e-11 | 15 |
uriniferous tubule | 5.38e-11 | 15 |
nephrogenic mesenchyme | 5.38e-11 | 15 |
adult organism | 6.74e-11 | 114 |
cavitated compound organ | 1.42e-10 | 31 |
kidney | 2.85e-10 | 26 |
kidney mesenchyme | 2.85e-10 | 26 |
upper urinary tract | 2.85e-10 | 26 |
kidney rudiment | 2.85e-10 | 26 |
kidney field | 2.85e-10 | 26 |
excretory tube | 4.05e-10 | 16 |
kidney epithelium | 4.05e-10 | 16 |
compound organ | 1.02e-09 | 68 |
cortex of kidney | 1.11e-07 | 12 |
renal parenchyma | 1.11e-07 | 12 |
urinary system structure | 3.69e-07 | 47 |
cortex | 4.16e-07 | 15 |
renal system | 6.61e-07 | 48 |