FFCP PHASE1:Hg19::chr22:17739174..17739198,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=51816 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=1839 | |||
|TSSclassifier=not | |||
|UniProt=C9J716 | |||
|association_with_transcript=-49bp_to_ENST00000366217,ENST00000489588_5end | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_4_at_CECR1_5end | |||
|id=chr22:17739174..17739198,- | |||
|ontology_enrichment_celltype=CL:0002057!1.35e-12!42;CL:0000860!2.71e-11!45;CL:0002087!2.57e-10!119;CL:0002194!2.17e-09!63;CL:0000576!2.17e-09!63;CL:0000040!2.17e-09!63;CL:0000559!2.17e-09!63;CL:0002009!7.05e-09!65;CL:0000738!8.41e-09!140;CL:0002031!3.20e-08!124;CL:0000839!9.69e-08!70;CL:0000557!1.56e-07!71;CL:0000766!2.51e-07!76 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.20e-12;33!CL:0002057;1.20e-12;33!CL:0000576;3.45e-11;48!CL:0000473;2.76e-10;39!CL:0000234;2.76e-10;39!CL:0002393;4.03e-09;6!CL:0002397;4.03e-09;6!CL:0000766;3.16e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.96e-18,42;CL:0002057,2.96e-18,42;CL:0000473,7.04e-16,48;CL:0000234,7.04e-16,48;CL:0002194,8.16e-16,59;CL:0000576,8.16e-16,59;CL:0000040,8.16e-16,59;CL:0000559,8.16e-16,59;CL:0002009,2.84e-15,61;CL:0000839,4.65e-14,66;CL:0000557,7.74e-14,67;CL:0000766,8.04e-13,72;CL:0000763,3.06e-08,108;CL:0000049,3.06e-08,108;CL:0002087,1.12e-07,115;CL:0002031,2.57e-07,120 | |||
|ontology_enrichment_development_v019=CL:0002057;3.09e-11;42!UBERON:0006965;1.93e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.67e-13!115;UBERON:0001017!3.34e-09!82;UBERON:0005743!5.15e-09!86;UBERON:0001049!6.03e-09!57;UBERON:0005068!6.03e-09!57;UBERON:0006241!6.03e-09!57;UBERON:0007135!6.03e-09!57;UBERON:0000073!1.25e-08!94;UBERON:0001016!1.25e-08!94;UBERON:0002616!2.95e-08!59;UBERON:0000955!3.99e-08!69;UBERON:0006238!3.99e-08!69;UBERON:0002780!1.44e-07!41;UBERON:0001890!1.44e-07!41;UBERON:0006240!1.44e-07!41;UBERON:0002390!1.47e-07!102;UBERON:0003061!1.47e-07!102;UBERON:0003080!2.82e-07!42;UBERON:0004177!2.87e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;2.30e-26;2!UBERON:0005058;2.30e-26;2!UBERON:0009113;2.30e-26;2!UBERON:0004177;3.82e-11;5!UBERON:0005057;3.82e-11;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002405,9.73e-15,93;UBERON:0002390,6.33e-14,98;UBERON:0003061,6.33e-14,98;UBERON:0002370,1.11e-13,4;UBERON:0005058,1.11e-13,4;UBERON:0009113,1.11e-13,4;UBERON:0003295,1.11e-13,4;UBERON:0005562,1.11e-13,4;UBERON:0002193,1.60e-12,108;UBERON:0002371,4.21e-12,76;UBERON:0001474,3.74e-11,82;UBERON:0004765,4.42e-10,90;UBERON:0003351,1.99e-09,6;UBERON:0001434,5.59e-09,100;UBERON:0004177,3.33e-08,7;UBERON:0005057,3.33e-08,7;UBERON:0003081,2.87e-07,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0.0787107813136792,0,0,0.464448369948228,0,0,0,0.154934401160603,0.142169232487422,0,1.10799081706375,1.20326668482085,0.868043482863407,0.223915474239924,0.647787332037959,1.03030227053675,0.726991193897824,0,0.485168122375632,0,0,0,0,0.256160706529101,0.236482229888585,10.6871161028352,1.93645405075148,4.06279459783025,0.376484679085209,0,0.224723484445085,6.42776173978895,3.53021929783703,8.95071976118658,0.329851300186716,0,0.852449501065388,0,0.56738522469114,0.622822248995575,0,0,0,0.605399502633369,0,0.632924774881769,0,0,0,0,0,0,0.285012743741249,0,0,0,0,0,0.853460445133014,0,0,0,0,0.569212969109448,0,0,0,0,0,0,0,0,0.167186495390678,0.32592226663359,0.946895611469467,1.94826728407911,0.557052284425868,0.294605907474837,0.443067789167242,0,0,0.390178042679635,0.328875809207352,0,0,0,0.535081656179426,0,0.113309342697566,0.383220493601921,0,0.506039384039006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458426764241994,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0.132529768321485,0.116193942869518,0.207322110030741,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0.215714200818617,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.557216921387392,0,0,0,0.307160702099232,0,0.281338832821026,0,0,0,0.19924798825107,0.276283915531148,0,0,0.246169610922139,0,0,0,0,0,0,0,0,0.185536196323703,1.99613798001194,0.260427761085233,0,0,0,0,0,0.344743373241465,0,0,0.885741385813839,0.723578631752448,0,0.331737779793674,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.269604531922708,0,0,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,0.0969890164884194,0,0,0.137041924646751,0,0.0633107959558787,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0.279282401272254,0,0.717873024576814,0,0.429226048136571,0.223171457441873,0.0671834724867263,0,0,0,0,0,0,0,0,0,0.160753148465019,0.137539436597234,0.415440338029185,0,0,0,0,0,0.419636705079985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66116300871345,0,0,0.533937062838473,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.998361463831671,0.248385611765534,0.138348634936231,0,0,0,0,0.936669811613763,0.579684114443301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0.194860308839388,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0.218419276384028,0,0.212574920101683,0.123935764259002,0,0,0,0,0,0,0.128458450192919,0,0.638535436228605,0,0.252071696221718,0.138314504928436,0,0,0.294443155503077,0,0,0,0,0,0,0.0752103283492573,0,3.12605604493237,0,0,0,0.0675375846183947,0,0.206686796501184,0,0.546974809018219,0,0,0,0,0,0,0,0.455324382702595,0,0,0,0.339848664884159,0.0657727735628491,0,0,0.313972371402056,0.157115589916002,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0.198950775161368,0,0,0.109940516745429,0.301925687133347,0,0,1.41095188908457,0,0,0,0.594092800654172,0,0,0.187967835959707,0.45120521581504,0.0999411559249289,0,0,0,0,0,0.143339583151451,0,0.135982980381829,0,0,0,0,0,0.252332849670158,0.109265571963696,0,0,0,0.275684698604535,0.50141507858475,0.0757786982182394,0,0.829169439458779,0.620597975171371,0,0.476128862927481,5.42546842622451,8.50423585853253,0,0.0636471582781649,0,0,0,0.202056159043763,0.286888821570705,0,0,0,0,0,0,0.122241444182866,0,0.665756774185513,1.00636896795513,0.320568492303233 | |||
|short_description=p4@CECR1 | |||
}} |
Revision as of 14:29, 21 January 2014
Short description: | p4@CECR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_CECR1_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -49bp_to_ENST00000366217, ENST00000489588_5end |
EntrezGene: | CECR1 |
HGNC: | 1839 |
UniProt: | C9J716 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.96e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.96e-18 | 42 |
defensive cell | 7.04e-16 | 48 |
phagocyte | 7.04e-16 | 48 |
monopoietic cell | 8.16e-16 | 59 |
monocyte | 8.16e-16 | 59 |
monoblast | 8.16e-16 | 59 |
promonocyte | 8.16e-16 | 59 |
macrophage dendritic cell progenitor | 2.84e-15 | 61 |
myeloid lineage restricted progenitor cell | 4.65e-14 | 66 |
granulocyte monocyte progenitor cell | 7.74e-14 | 67 |
myeloid leukocyte | 8.04e-13 | 72 |
myeloid cell | 3.06e-08 | 108 |
common myeloid progenitor | 3.06e-08 | 108 |
nongranular leukocyte | 1.12e-07 | 115 |
hematopoietic lineage restricted progenitor cell | 2.57e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
immune system | 9.73e-15 | 93 |
hematopoietic system | 6.33e-14 | 98 |
blood island | 6.33e-14 | 98 |
thymus | 1.11e-13 | 4 |
hemolymphoid system gland | 1.11e-13 | 4 |
thymic region | 1.11e-13 | 4 |
pharyngeal gland | 1.11e-13 | 4 |
thymus primordium | 1.11e-13 | 4 |
hemolymphoid system | 1.60e-12 | 108 |
bone marrow | 4.21e-12 | 76 |
bone element | 3.74e-11 | 82 |
skeletal element | 4.42e-10 | 90 |
pharyngeal epithelium | 1.99e-09 | 6 |
skeletal system | 5.59e-09 | 100 |
hemopoietic organ | 3.33e-08 | 7 |
immune organ | 3.33e-08 | 7 |
lateral plate mesoderm | 2.87e-07 | 203 |