FFCP PHASE1:Hg19::chr2:192711926..192711937,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8436 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10690 | |||
|TSSclassifier=strong | |||
|UniProt=O95810 | |||
|association_with_transcript=43bp_to_ENST00000304141,uc002utb.2_5end | |||
|coexpression_cluster_id=C64 | |||
|description=CAGE_peak_3_at_SDPR_5end | |||
|id=chr2:192711926..192711937,- | |||
|ontology_enrichment_celltype=CL:0002139!2.83e-16!24;CL:0000213!2.38e-14!57;CL:0000215!2.38e-14!57;CL:0000222!2.72e-13!119;CL:0000115!1.30e-12!35;CL:0000071!8.38e-12!18;CL:0002546!8.38e-12!18;CL:0002078!8.39e-10!44;CL:1000413!3.22e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.13e-26;24!CL:0000115;5.01e-20;36!CL:0000071;4.35e-19;18!CL:0000213;1.08e-13;58!CL:0000215;1.08e-13;58!CL:0002078;9.56e-13;45!CL:1000413;7.10e-11;9!CL:0002138;3.16e-09;6!CL:0002543;6.02e-09;6!CL:0000097;1.90e-08;5!CL:0002544;3.05e-08;6!CL:0000163;2.58e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,5.18e-27,24;CL:0000213,8.95e-24,58;CL:0000215,8.95e-24,58;CL:0000115,3.53e-23,36;CL:0000071,2.00e-19,18;CL:0002546,2.00e-19,18;CL:0002078,4.11e-19,45;CL:0000222,1.40e-12,121;CL:1000413,4.09e-11,9;CL:0005020,3.25e-09,6;CL:0002138,3.25e-09,6;CL:0005022,3.25e-09,6;CL:0002543,5.01e-09,6;CL:0000097,1.95e-08,5;CL:0002028,1.95e-08,5;CL:0000076,2.54e-08,63;CL:0002544,2.88e-08,6;CL:0000163,3.77e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002546;4.35e-19;18!CL:0005022;3.16e-09;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001009!1.12e-22!113;UBERON:0004535!1.24e-21!110;UBERON:0000477!4.12e-16!286;UBERON:0007023!8.14e-16!115;UBERON:0004111!2.57e-15!241;UBERON:0003914!2.89e-15!118;UBERON:0002049!3.00e-15!79;UBERON:0007798!3.00e-15!79;UBERON:0004872!3.02e-15!84;UBERON:0000025!2.53e-13!194;UBERON:0000119!3.40e-13!312;UBERON:0000055!8.60e-13!69;UBERON:0000490!2.35e-12!138;UBERON:0000483!2.51e-12!309;UBERON:0001986!8.38e-12!18;UBERON:0004638!8.38e-12!18;UBERON:0004852!8.38e-12!18;UBERON:0000487!2.66e-11!22;UBERON:0001981!6.82e-11!60;UBERON:0007500!6.82e-11!60;UBERON:0004537!6.82e-11!60;UBERON:0006965!6.82e-11!60;UBERON:0006914!1.01e-09!25;UBERON:0000467!6.40e-09!625;UBERON:0000480!8.93e-09!626;UBERON:0000468!1.58e-08!659;UBERON:0002100!1.36e-07!216;UBERON:0003915!3.22e-07!9;UBERON:0004700!3.22e-07!9;UBERON:0001917!3.22e-07!9;UBERON:0000947!7.00e-07!21;UBERON:0010191!7.00e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;4.35e-19;18!UBERON:0001986;4.35e-19;18!UBERON:0004852;4.35e-19;18!UBERON:0000487;1.24e-16;22!UBERON:0006914;6.92e-14;25!UBERON:0003915;7.10e-11;9!UBERON:0004700;7.10e-11;9!UBERON:0001917;7.10e-11;9!UBERON:0000490;1.76e-10;33!UBERON:0004535;5.34e-09;109!UBERON:0001009;1.65e-08;112!UBERON:0000055;2.13e-08;65!UBERON:0007100;5.25e-08;25!UBERON:0001638;2.79e-07;9!UBERON:0003920;2.79e-07;9!UBERON:0004582;2.79e-07;9!UBERON:0002049;4.32e-07;75!UBERON:0007798;4.32e-07;75!UBERON:0007500;4.35e-07;56!UBERON:0001981;4.35e-07;56!UBERON:0004537;4.35e-07;56!UBERON:0000948;5.00e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001009,6.18e-25,112;UBERON:0004535,8.13e-24,109;UBERON:0004638,2.00e-19,18;UBERON:0001986,2.00e-19,18;UBERON:0004852,2.00e-19,18;UBERON:0004872,2.84e-17,83;UBERON:0002049,6.15e-17,78;UBERON:0007798,6.15e-17,78;UBERON:0000487,6.19e-17,22;UBERON:0003914,8.19e-17,117;UBERON:0000055,3.35e-16,68;UBERON:0006914,3.82e-14,25;UBERON:0007500,2.33e-12,59;UBERON:0001981,2.33e-12,59;UBERON:0004537,2.33e-12,59;UBERON:0006965,2.33e-12,59;UBERON:0003915,4.09e-11,9;UBERON:0004700,4.09e-11,9;UBERON:0001917,4.09e-11,9;UBERON:0004797,1.32e-08,7;UBERON:0004111,1.69e-08,240;UBERON:0007100,4.74e-08,27;UBERON:0000025,6.32e-08,192;UBERON:0000490,8.68e-08,148;UBERON:0001638,2.94e-07,9;UBERON:0003920,2.94e-07,9;UBERON:0004582,2.94e-07,9;UBERON:0000926,3.29e-07,315;UBERON:0004120,3.29e-07,315;UBERON:0006603,3.29e-07,315;UBERON:0000948,4.86e-07,24;UBERON:0005498,4.86e-07,24;UBERON:0004140,4.86e-07,24;UBERON:0009881,4.86e-07,24;UBERON:0004141,4.86e-07,24;UBERON:0003084,4.86e-07,24;UBERON:0007005,4.86e-07,24;UBERON:0004139,4.86e-07,24;UBERON:0004291,4.86e-07,24;UBERON:0003081,9.49e-07,203 | |||
|phase1_expression=0.363356758541113,0.856402095563933,0.986680828671798,1.0007329835313,1.34088328328186,1.74467704820074,2.53299878168311,0,0,0.245733936501509,0,0.436882744260345,0,0.37129905888014,0.331397375727916,0,0,0.730310090387373,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0,0,0,0,0,0,0.880801318004542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0.560508562981536,1.58030450865046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,6.00954040664593,0.361439152384566,0,0.144846518960824,0,0,1.51255707462509,0.221729397462564,0.702678285545008,0.916853528483988,0,0,0,0,0,0,0,0,5.56534740626774,4.30117297553062,3.12426451446835,4.52246353539208,2.93649605346934,3.57653454522088,1.67195973229448,9.04458657092651,6.04802646567407,11.7152214467635,3.62546385398232,0,7.07779966889692,6.25027236587977,1.62028389576352,8.12627527385126,6.96041055141126,5.51796254368279,6.13266549863533,2.84779697870439,5.86245580577303,0,0,0,0,1.8994576749687,2.64818361626438,3.15520282823695,1.77334191099179,3.36406560085384,2.1349799145941,0,2.17847724779836,0.942974704487816,1.14423332179421,1.36221684880438,1.72852777344,0,0,0,0,0,0,0.140450806702248,0,0.122834317311768,0.103325781175765,0,0,0,0,0,0.250237039743928,0.554128230968366,0,0,0,2.04177929688038,0.538168907066586,0.85422955527427,0,0,0.206105058476878,0.772921620136887,0.37223371266318,0.168776332241266,0.0974370051611986,0,0.0920498986422993,0.161646056818812,0.710019185033229,0.201504196455281,0.339121184620975,0.193260853163297,0,0,0,0,0,0,0,0,1.56449532329816,0,0,0,0,0,0,0,0,0,0.237270619111097,0,0,0,4.42893272774789,0,2.8810180793198,2.94017422771084,1.26755034821831,0.982827216677626,3.54473944008842,0,0,1.20097467208968,0,0,0,0,0,0,1.44331342025273,0.231860809950154,0.352226082707465,4.61972632835436,4.1668696131895,5.89787871927255,0,0,0,0.234004265139238,0,0,0,0,0.179117045405697,0.581267877027924,0,92.6206887244374,15.8487181223807,41.2582949926136,74.5100159165691,26.6371534529662,0,0,0,1.71072446022705,0,0,0,1.23344192779897,2.1798003441664,1.9067954313447,0.258543431515556,0,0,0,0,0,0,0,1.42977993658148,0,0,0,0.710783897485092,0,2.1100756394171,2.61460037580088,3.29910870900788,0,0,0,0,0,0,0.144781306667579,0.61642896765115,1.25342674267927,0,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0.49076596687656,0,0,0.831883446123229,0,0.315404830067869,0.35142424497814,0.300946099727719,0,0,0,0,0.0868836144680828,0.195801157462741,0.686286847621712,0,0,0.320182673410333,0,0,0,0.992431231275107,0.460385919864187,0.280660094433074,1.40953064181271,0,1.12597744800525,0,0,0,0.410635780069046,0.519254429183621,0.348631135379878,0,0,0.184161977871793,0.229628896329213,0,0.524497659837696,0,0,0.784349769176855,0,0,1.13733384070897,1.87103075804167,3.45465465763423,1.54227252690289,0,0,0,0,0,0,0,0,0,0,1.44257416306811,0,0,0,0,4.82051789532479,0.193341436584244,0.308097234229289,0.460511024178389,1.51620229732984,0.322260734604821,0.435050081742686,1.02271952899321,0.267096106940212,0,0.192190067365106,0.255225424989168,0.10115778085555,0.929691098594572,0.62962469366128,0.6970372701606,1.23213432070436,1.59691809095107,0.869932992075073,0,0.143124886741991,1.116475108079,0.632758849437452,0.38126038784765,0.767693373934002,0.42793898803392,0,0,0.179872457583315,1.64722217841633,0.117812402345686,0,0,0,0,0.731140468893853,1.05650146756755,0.136499911407986,0.424216295861138,0,0,0.66343897524122,0.438450885253763,0,1.9676842561399,0.405820753925408,1.239293992399,0.281695602532241,0.143411352204052,0,0,0,0.633322905892992,0,0.379473173765715,0,0.0962221127255121,0,0,1.7887322147588,0,0,0,0,4.56702848308952,3.0585488285695,2.84823593587081,2.38231775457789,0.822724546172388,3.24236655596359,0.540031437238115,3.17250070517708,0.106824071127473,0,0.245040215981032,0,0,0,0,0.798317485731266,0,0.846694330895531,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,1.67043704337145,0,2.16364542780786,0,0,0,3.51619630252546,0.121360521749513,0,0,0,0,0.307160702099232,0,0.281338832821026,0,0,0,0.398495976502139,0.276283915531148,0,0,0,0,0,0,0,1.87422470710174,2.3948309234694,0,0.969332746095218,0.278304294485554,0,0,0,4.34999745260876,0.341380344856499,0.508507300585533,0,0,0,0,0.885741385813839,0.241192877250816,0,0.110579259931225,0.591095237907095,0.658156191461918,0,0,1.07730361905316,0,0,0,0,0,0.183195186803725,1.06606955203727,0,0.941881538370149,0.831058409500782,0.676786981851542,0.392125068635479,0.839107934879214,0.37950746544837,1.43042921082341,0,0.816164040795739,0,0,0.995261931078505,1.59223616106011,1.83309043480088,0,0,0,0.202203398942031,4.81546588379273,0.468528891450678,0,0.391329237864179,0.728341138602278,0.789168805698781,0,0.30607276163049,1.0741718536843,0,0,0.664653872707185,0,0,1.19472429772959,1.42304773014896,1.10939738410511,0.173559738335131,0,0.0870592065804026,1.92199335066233,0,0,0,0,1.84279131327997,0,1.12990370390266,0,0,0.2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| |||
|short_description=p3@SDPR | |||
}} |
Revision as of 07:39, 21 January 2014
Short description: | p3@SDPR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SDPR_5end |
Coexpression cluster: | C64_Mast_chronic_acute_immature_chorionic_Basophils_Dendritic |
Association with transcript: | 43bp_to_ENST00000304141, uc002utb.2_5end |
EntrezGene: | SDPR |
HGNC: | 10690 |
UniProt: | O95810 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 5.18e-27 | 24 |
lining cell | 8.95e-24 | 58 |
barrier cell | 8.95e-24 | 58 |
endothelial cell | 3.53e-23 | 36 |
blood vessel endothelial cell | 2.00e-19 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.00e-19 | 18 |
meso-epithelial cell | 4.11e-19 | 45 |
mesodermal cell | 1.40e-12 | 121 |
endothelial cell of artery | 4.09e-11 | 9 |
lymphangioblast | 3.25e-09 | 6 |
endothelial cell of lymphatic vessel | 3.25e-09 | 6 |
vascular lymphangioblast | 3.25e-09 | 6 |
vein endothelial cell | 5.01e-09 | 6 |
mast cell | 1.95e-08 | 5 |
basophil mast progenitor cell | 1.95e-08 | 5 |
squamous epithelial cell | 2.54e-08 | 63 |
aortic endothelial cell | 2.88e-08 | 6 |
endocrine cell | 3.77e-07 | 9 |