FFCP PHASE1:Hg19::chr2:67791424..67791436,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr2:67791424..67791436,+ | |||
|id=chr2:67791424..67791436,+ | |||
|ontology_enrichment_celltype=CL:0002595!8.08e-21!5;CL:0000359!9.31e-19!32;CL:0000569!4.51e-17!4;CL:0000011!4.51e-17!4;CL:0000192!7.08e-16!42;CL:0000514!7.08e-16!42;CL:0000680!2.21e-14!57;CL:0000056!2.21e-14!57;CL:0000355!2.21e-14!57;CL:0000187!2.01e-13!54;CL:0000183!5.39e-12!59;CL:0000393!9.73e-12!60;CL:0000211!9.73e-12!60;CL:0000222!5.91e-10!119;CL:0002593!1.54e-09!2;CL:0002596!2.63e-09!2;CL:0002589!5.26e-09!2;CL:0002494!1.45e-08!16 | |||
|ontology_enrichment_celltype_v019=CL:0000569;3.83e-28;4!CL:0002593;1.85e-25;2!CL:0002595;1.15e-22;5!CL:0002591;4.83e-14;1!CL:0000511;1.25e-13;1!CL:0002625;1.25e-13;1!CL:0000216;1.25e-13;1!CL:0000359;5.54e-10;32!CL:0002596;1.16e-07;2!CL:0002494;1.73e-07;16 | |||
|ontology_enrichment_celltype_v019_2=CL:0000569,6.11e-28,4;CL:0000011,6.11e-28,4;CL:0002593,1.63e-25,2;CL:0002595,8.56e-23,5;CL:0002591,3.98e-14,1;CL:0000511,9.73e-14,1;CL:0002625,9.73e-14,1;CL:0000216,9.73e-14,1;CL:0000359,9.68e-10,32;CL:0002596,9.87e-08,2;CL:0002494,1.94e-07,16;CL:0000192,3.19e-07,43;CL:0000514,3.19e-07,43 | |||
|ontology_enrichment_development_v019=CL:0000011;3.83e-28;4 | |||
|ontology_enrichment_disease=DOID:2394!2.07e-21!14;DOID:120!2.58e-10!27;DOID:193!1.71e-09!29 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003834!8.08e-21!5;UBERON:0001533!8.08e-21!5;UBERON:0001637!2.33e-18!42;UBERON:0003509!2.33e-18!42;UBERON:0004572!2.33e-18!42;UBERON:0004573!4.31e-18!33;UBERON:0004571!4.31e-18!33;UBERON:0000991!3.10e-17!21;UBERON:0009196!3.10e-17!21;UBERON:0009117!3.10e-17!21;UBERON:0005564!3.10e-17!21;UBERON:0004176!2.32e-16!22;UBERON:0004872!2.94e-16!84;UBERON:0000992!9.10e-14!13;UBERON:0001134!3.41e-13!61;UBERON:0002036!3.41e-13!61;UBERON:0003082!3.41e-13!61;UBERON:0003513!6.68e-13!8;UBERON:0002118!1.04e-12!5;UBERON:0004532!1.04e-12!5;UBERON:0002385!1.17e-12!63;UBERON:0001015!1.17e-12!63;UBERON:0000383!1.17e-12!63;UBERON:0004290!1.50e-12!70;UBERON:0001981!8.37e-12!60;UBERON:0007500!8.37e-12!60;UBERON:0004537!8.37e-12!60;UBERON:0006965!8.37e-12!60;UBERON:0000486!3.82e-10!82;UBERON:0000914!5.62e-10!83;UBERON:0002329!5.62e-10!83;UBERON:0003077!5.62e-10!83;UBERON:0003059!5.62e-10!83;UBERON:0007282!5.62e-10!83;UBERON:0009618!5.62e-10!83;UBERON:0007285!5.62e-10!83;UBERON:0004535!5.92e-10!110;UBERON:0000055!8.00e-10!69;UBERON:0001009!1.44e-09!113;UBERON:0002456!1.54e-09!2;UBERON:0000948!1.63e-09!24;UBERON:0005498!1.63e-09!24;UBERON:0004140!1.63e-09!24;UBERON:0009881!1.63e-09!24;UBERON:0004141!1.63e-09!24;UBERON:0003084!1.63e-09!24;UBERON:0007005!1.63e-09!24;UBERON:0004139!1.63e-09!24;UBERON:0004291!1.63e-09!24;UBERON:0002119!2.61e-09!4;UBERON:0004531!2.61e-09!4;UBERON:0005396!2.63e-09!2;UBERON:0007497!5.26e-09!2;UBERON:0003643!5.26e-09!2;UBERON:0003504!5.26e-09!2;UBERON:0003469!5.26e-09!2;UBERON:0003496!5.26e-09!2;UBERON:0004797!5.26e-09!2;UBERON:0002012!5.26e-09!2;UBERON:0001529!5.26e-09!2;UBERON:0007204!5.26e-09!2;UBERON:0008886!5.26e-09!2;UBERON:0007303!5.26e-09!2;UBERON:0002061!5.26e-09!2;UBERON:0005432!5.26e-09!2;UBERON:0004363!5.26e-09!2;UBERON:0003914!5.72e-09!118;UBERON:0007100!2.59e-08!27;UBERON:0002049!3.65e-08!79;UBERON:0007798!3.65e-08!79;UBERON:0003133!6.82e-08!48;UBERON:0003498!9.82e-08!5;UBERON:0005985!9.82e-08!5;UBERON:0002323!7.94e-07!46 | |||
|ontology_enrichment_uberon_v019=UBERON:0002456;1.85e-25;2!UBERON:0003834;1.15e-22;5!UBERON:0001533;1.15e-22;5!UBERON:0003513;2.19e-16;7!UBERON:0000473;8.58e-15;8!UBERON:0001136;1.25e-13;1!UBERON:0001343;1.25e-13;1!UBERON:0004910;1.25e-13;1!UBERON:0004813;1.25e-13;1!UBERON:0003135;6.41e-11;11!UBERON:0004573;2.43e-08;33!UBERON:0004571;2.43e-08;33!UBERON:0000078;1.16e-07;2!UBERON:0002012;1.16e-07;2!UBERON:0005396;1.16e-07;2!UBERON:0008886;1.16e-07;2!UBERON:0001637;1.83e-07;42!UBERON:0003509;1.83e-07;42!UBERON:0004572;1.83e-07;42!UBERON:0004909;1.87e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002456,1.63e-25,2;UBERON:0003834,8.56e-23,5;UBERON:0001533,8.56e-23,5;UBERON:0003513,1.77e-16,7;UBERON:0000473,8.01e-15,8;UBERON:0004872,9.43e-14,83;UBERON:0001136,9.73e-14,1;UBERON:0001343,9.73e-14,1;UBERON:0004910,9.73e-14,1;UBERON:0005154,9.73e-14,1;UBERON:0005295,9.73e-14,1;UBERON:0004813,9.73e-14,1;UBERON:0005297,9.73e-14,1;UBERON:0005294,9.73e-14,1;UBERON:0010141,9.73e-14,1;UBERON:0005891,9.73e-14,1;UBERON:0003135,6.10e-11,11;UBERON:0001637,1.96e-10,42;UBERON:0003509,1.96e-10,42;UBERON:0004572,1.96e-10,42;UBERON:0004573,1.96e-09,33;UBERON:0004571,1.96e-09,33;UBERON:0000948,1.76e-08,24;UBERON:0005498,1.76e-08,24;UBERON:0004140,1.76e-08,24;UBERON:0009881,1.76e-08,24;UBERON:0004141,1.76e-08,24;UBERON:0003084,1.76e-08,24;UBERON:0007005,1.76e-08,24;UBERON:0004139,1.76e-08,24;UBERON:0004291,1.76e-08,24;UBERON:0004535,3.33e-08,109;UBERON:0001009,5.91e-08,112;UBERON:0005396,9.87e-08,2;UBERON:0000078,1.05e-07,2;UBERON:0007497,1.05e-07,2;UBERON:0003643,1.05e-07,2;UBERON:0003504,1.05e-07,2;UBERON:0003469,1.05e-07,2;UBERON:0003496,1.05e-07,2;UBERON:0002012,1.05e-07,2;UBERON:0008886,1.05e-07,2;UBERON:0007303,1.05e-07,2;UBERON:0002061,1.05e-07,2;UBERON:0005432,1.05e-07,2;UBERON:0004363,1.05e-07,2;UBERON:0003914,1.44e-07,117;UBERON:0007100,1.46e-07,27;UBERON:0004909,1.64e-07,2;UBERON:0007500,2.54e-07,59;UBERON:0001981,2.54e-07,59;UBERON:0004537,2.54e-07,59;UBERON:0006965,2.54e-07,59 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.589405839739707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.25095607382472,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0.791951872933429,2.1100756394171,0.871533458600294,1.19967589418468,0,0,0,0,0,0,0.289562613335158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232420756919918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,1.6068392984416,0,0,0.15350367472613,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0.308033580176089,0,0,0.37064843820784,0.715624433709956,0,0,0,0,0,0.318203247925937,2.35484592059769,0,0,0,0,0,0.421258456238981,0.48763373908959,1.94970791705028,1.05650146756755,0,0,2.26016233240486,1.65409603063837,0.66343897524122,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542999601753713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0.233713309847224,0,0.189403005275089,0,0,0.686520205190771,1.36107831386915,1.08806040407946,1.03498604992744,0.159296767163702,0,0.155262956876259,0.829412415681711,0,0,2.10360652596106,1.14241563650639,0.406870733204662,0.181848659202559,0.429642228169954,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.39516449665789,2.14371304124943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr2:67791424..67791436,+ | |||
}} |
Revision as of 03:36, 21 January 2014
Short description: | p@chr2:67791424..67791436, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:67791424..67791436, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac mesenchymal cell | 6.11e-28 | 4 |
migratory trunk neural crest cell | 6.11e-28 | 4 |
smooth muscle cell of the internal thoracic artery | 1.63e-25 | 2 |
smooth muscle cell of the subclavian artery | 8.56e-23 | 5 |
smooth muscle cell of the pulmonary artery | 3.98e-14 | 1 |
androgen binding protein secreting cell | 9.73e-14 | 1 |
seminiferous tubule epithelial cell | 9.73e-14 | 1 |
Sertoli cell | 9.73e-14 | 1 |
vascular associated smooth muscle cell | 9.68e-10 | 32 |
smooth muscle cell of the carotid artery | 9.87e-08 | 2 |
cardiocyte | 1.94e-07 | 16 |
smooth muscle cell | 3.19e-07 | 43 |
smooth muscle myoblast | 3.19e-07 | 43 |