FFCP PHASE1:Hg19::chr3:112081099..112081112,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1896 | |||
|description=CAGE_peak_at_chr3:112081099..112081112,- | |||
|id=chr3:112081099..112081112,- | |||
|ontology_enrichment_celltype=CL:0000359!5.14e-12!32;CL:0002592!5.89e-12!3;CL:0005020!1.75e-10!6;CL:0002138!1.75e-10!6;CL:0005022!1.75e-10!6;CL:0002589!1.10e-08!2;CL:0000192!1.29e-08!42;CL:0000514!1.29e-08!42;CL:0002595!2.35e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0002138;1.15e-09;6!CL:0002589;4.68e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0005020,1.21e-09,6;CL:0002138,1.21e-09,6;CL:0005022,1.21e-09,6;CL:0002589,4.69e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0004140;6.22e-15;1!UBERON:0010226;1.15e-14;1!UBERON:0005062;3.15e-14;4!UBERON:0007284;3.15e-14;4!CL:0005022;1.15e-09;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!1.41e-24!27;UBERON:0000948!1.56e-20!24;UBERON:0005498!1.56e-20!24;UBERON:0004140!1.56e-20!24;UBERON:0009881!1.56e-20!24;UBERON:0004141!1.56e-20!24;UBERON:0003084!1.56e-20!24;UBERON:0007005!1.56e-20!24;UBERON:0004139!1.56e-20!24;UBERON:0004291!1.56e-20!24;UBERON:0001009!2.06e-19!113;UBERON:0000055!4.94e-19!69;UBERON:0004872!4.13e-18!84;UBERON:0004535!6.44e-17!110;UBERON:0002049!5.88e-16!79;UBERON:0007798!5.88e-16!79;UBERON:0003103!5.76e-15!69;UBERON:0001981!3.75e-14!60;UBERON:0007500!3.75e-14!60;UBERON:0004537!3.75e-14!60;UBERON:0006965!3.75e-14!60;UBERON:0004573!7.85e-14!33;UBERON:0004571!7.85e-14!33;UBERON:0003978!1.29e-12!3;UBERON:0009751!1.29e-12!3;UBERON:0000946!1.29e-12!3;UBERON:0002523!1.29e-12!3;UBERON:0005983!1.29e-12!3;UBERON:0002165!1.29e-12!3;UBERON:0002062!1.29e-12!3;UBERON:0007280!1.29e-12!3;UBERON:0004151!1.69e-12!3;UBERON:0001637!3.62e-12!42;UBERON:0003509!3.62e-12!42;UBERON:0004572!3.62e-12!42;UBERON:0003498!3.76e-12!5;UBERON:0005985!3.76e-12!5;UBERON:0001621!5.89e-12!3;UBERON:0003914!2.73e-11!118;UBERON:0004111!8.08e-10!241;UBERON:0002133!4.36e-09!2;UBERON:0002081!9.09e-09!2;UBERON:0001529!1.10e-08!2;UBERON:0007204!1.10e-08!2;UBERON:0000477!1.81e-08!286;UBERON:0000025!3.01e-08!194;UBERON:0003127!4.53e-08!2;UBERON:0001473!7.26e-08!8;UBERON:0004536!7.26e-08!8;UBERON:0006558!7.26e-08!8;UBERON:0001134!1.54e-07!61;UBERON:0002036!1.54e-07!61;UBERON:0003082!1.54e-07!61;UBERON:0003834!2.35e-07!5;UBERON:0001533!2.35e-07!5;UBERON:0002385!3.25e-07!63;UBERON:0001015!3.25e-07!63;UBERON:0000383!3.25e-07!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0002133;2.09e-27;2!UBERON:0000948;1.12e-21;22!UBERON:0007100;4.73e-19;25!UBERON:0003978;1.24e-18;3!UBERON:0000946;1.24e-18;3!UBERON:0004151;1.55e-18;3!UBERON:0002135;8.17e-15;1!UBERON:0002084;1.15e-14;1!UBERON:0002082;1.15e-14;1!UBERON:0002134;2.11e-14;1!UBERON:0002426;2.11e-14;1!UBERON:0003831;2.11e-14;1!UBERON:0003898;2.11e-14;1!UBERON:0004830;2.11e-14;1!UBERON:0005208;2.11e-14;1!UBERON:0003830;2.11e-14;1!UBERON:0005175;2.11e-14;1!UBERON:0001774;2.11e-14;1!UBERON:0004145;2.11e-14;1!UBERON:0005946;2.11e-14;1!UBERON:0001103;2.11e-14;1!UBERON:0005965;2.11e-14;1!UBERON:0002078;2.11e-14;1!UBERON:0001529;4.68e-08;2!UBERON:0007204;4.68e-08;2!UBERON:0000341;7.52e-08;2!UBERON:0005090;7.52e-08;2!UBERON:0001630;7.52e-08;2!UBERON:0002081;7.52e-08;2!UBERON:0001473;1.82e-07;8!UBERON:0004536;1.82e-07;8!UBERON:0006558;1.82e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002133,2.39e-27,2;UBERON:0000948,7.57e-20,24;UBERON:0005498,7.57e-20,24;UBERON:0004140,7.57e-20,24;UBERON:0009881,7.57e-20,24;UBERON:0004141,7.57e-20,24;UBERON:0003084,7.57e-20,24;UBERON:0007005,7.57e-20,24;UBERON:0004139,7.57e-20,24;UBERON:0004291,7.57e-20,24;UBERON:0003978,1.36e-18,3;UBERON:0009751,1.36e-18,3;UBERON:0000946,1.36e-18,3;UBERON:0002523,1.36e-18,3;UBERON:0005983,1.36e-18,3;UBERON:0002165,1.36e-18,3;UBERON:0002062,1.36e-18,3;UBERON:0007280,1.36e-18,3;UBERON:0004151,1.48e-18,3;UBERON:0007100,1.29e-17,27;UBERON:0002135,9.36e-15,1;UBERON:0002084,1.07e-14,1;UBERON:0002082,1.07e-14,1;UBERON:0010226,1.07e-14,1;UBERON:0002426,1.84e-14,1;UBERON:0003831,1.84e-14,1;UBERON:0003898,1.84e-14,1;UBERON:0004830,1.84e-14,1;UBERON:0003830,1.84e-14,1;UBERON:0005175,1.84e-14,1;UBERON:0001774,1.84e-14,1;UBERON:0001103,1.84e-14,1;UBERON:0010084,1.84e-14,1;UBERON:0002134,2.11e-14,1;UBERON:0005208,2.11e-14,1;UBERON:0005946,2.11e-14,1;UBERON:0005965,2.11e-14,1;UBERON:0002078,2.11e-14,1;UBERON:0004535,1.69e-13,109;UBERON:0001009,4.20e-13,112;UBERON:0004872,4.34e-12,83;UBERON:0000055,1.07e-11,68;UBERON:0002049,4.26e-10,78;UBERON:0007798,4.26e-10,78;UBERON:0003103,3.83e-09,68;UBERON:0004797,1.65e-08,7;UBERON:0003914,2.76e-08,117;UBERON:0001529,4.69e-08,2;UBERON:0007204,4.69e-08,2;UBERON:0000341,6.15e-08,2;UBERON:0005090,7.03e-08,2;UBERON:0001630,7.03e-08,2;UBERON:0002081,7.52e-08,2;UBERON:0010227,7.52e-08,2;UBERON:0007500,8.11e-08,59;UBERON:0001981,8.11e-08,59;UBERON:0004537,8.11e-08,59;UBERON:0006965,8.11e-08,59;UBERON:0004111,8.26e-08,240;UBERON:0001473,1.88e-07,8;UBERON:0004536,1.88e-07,8;UBERON:0006558,1.88e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,2.28081631715554,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379891534993739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340296549480063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01056513432752,0.925971025153221,1.71228737011138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23213432070436,0.532306030317022,0,0.37064843820784,3.14874750832381,0,0,0,0,0,0,0,0,0,0,0.202182481573316,14.2659289055707,0.421258456238981,0,0.974853958525138,0,0,0,0,0,0.66343897524122,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60515529459758,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290967049465258,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.0721064139948,0.916641696046735,1.43574604915363,0.399358000997982,0,0.669514372325618,4.16537529417703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0.714695326373367,2.64836788146173,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.78602152549833,0,0,0,0,0,0,0.7520696820681,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,5.91420599958536,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0.971421986118279,0,0,0,0,0,0,0,0.437119121007915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90451545170992,0,0.372448285775147,0,0,0.808468755832877,0.217716747896961,3.42233301085281,0,0.0717222053926763,0.665320713092027,0,0,0,0,0,0,0.813792356631477,0,0,0 | |||
|short_description=p@chr3:112081099..112081112,- | |||
}} |
Revision as of 20:30, 21 January 2014
Short description: | p@chr3:112081099..112081112, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:112081099..112081112, - |
Coexpression cluster: | C1896_Smooth_mesenchymal_heart_tongue_left_Fibroblast_Endothelial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphangioblast | 1.21e-09 | 6 |
endothelial cell of lymphatic vessel | 1.21e-09 | 6 |
vascular lymphangioblast | 1.21e-09 | 6 |
smooth muscle cell of the brachiocephalic vasculature | 4.69e-08 | 2 |