FFCP PHASE1:Hg19::chr3:53164571..53164592,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C427 | |||
|description=CAGE_peak_at_chr3:53164571..53164592,+ | |||
|id=chr3:53164571..53164592,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.17e-51!140;CL:0000037!5.95e-45!172;CL:0000566!5.95e-45!172;CL:0000988!1.94e-44!182;CL:0002031!3.86e-42!124;CL:0002032!9.82e-41!165;CL:0000837!9.82e-41!165;CL:0002087!3.48e-40!119;CL:0002057!3.65e-32!42;CL:0000860!6.78e-32!45;CL:0000766!3.28e-30!76;CL:0000839!1.48e-24!70;CL:0000557!4.70e-24!71;CL:0000763!5.26e-24!112;CL:0000049!5.26e-24!112;CL:0002009!2.16e-23!65;CL:0002194!1.51e-22!63;CL:0000576!1.51e-22!63;CL:0000040!1.51e-22!63;CL:0000559!1.51e-22!63;CL:0000134!2.18e-20!358;CL:0002320!6.37e-20!365;CL:0000219!7.09e-18!390;CL:0000838!8.32e-16!52;CL:0000542!3.35e-15!53;CL:0000051!3.35e-15!53;CL:0000034!4.91e-14!444;CL:0000048!1.89e-13!430;CL:0000723!3.20e-13!436;CL:0000003!4.69e-10!722;CL:0000094!2.19e-08!8;CL:0000236!2.25e-08!14;CL:0002393!4.83e-08!9;CL:0002397!4.83e-08!9;CL:0000791!5.63e-08!18;CL:0000789!5.63e-08!18;CL:0002420!5.63e-08!18;CL:0002419!5.63e-08!18;CL:0000790!5.63e-08!18;CL:0000081!5.91e-08!11;CL:0000945!6.45e-08!24;CL:0000826!6.45e-08!24;CL:0000084!4.22e-07!25;CL:0000827!4.22e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.50e-47;33!CL:0002057;1.50e-47;33!CL:0000576;2.90e-34;48!CL:0000473;5.70e-34;39!CL:0000234;5.70e-34;39!CL:0000766;5.13e-28;69!CL:0002087;1.80e-21;104!CL:0000094;1.29e-18;8!CL:0000236;6.39e-17;13!CL:0000738;2.96e-16;136!CL:0000081;4.50e-16;11!CL:0000791;9.46e-16;18!CL:0000789;9.46e-16;18!CL:0002419;9.46e-16;18!CL:0000624;3.50e-14;6!CL:0002393;2.31e-13;6!CL:0002397;2.31e-13;6!CL:0000542;2.46e-13;53!CL:0000763;2.79e-11;100!CL:0000988;3.78e-11;177!CL:0000084;1.71e-10;25!CL:0000623;2.11e-08;3!CL:0000945;4.66e-08;24!CL:0000219;6.12e-08;193!CL:0000775;6.22e-08;3!CL:0000898;7.99e-08;3!CL:0000767;9.15e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.68e-78,136;CL:0002087,1.01e-70,115;CL:0000860,3.78e-65,42;CL:0002057,3.78e-65,42;CL:0002031,9.45e-65,120;CL:0000037,1.05e-59,168;CL:0000766,1.21e-59,72;CL:0002032,2.36e-59,161;CL:0000837,2.36e-59,161;CL:0000988,4.34e-59,177;CL:0000473,1.76e-58,48;CL:0000234,1.76e-58,48;CL:0002194,8.21e-47,59;CL:0000576,8.21e-47,59;CL:0000040,8.21e-47,59;CL:0000559,8.21e-47,59;CL:0002009,6.51e-45,61;CL:0000839,7.16e-43,66;CL:0000557,4.63e-42,67;CL:0000763,3.51e-35,108;CL:0000049,3.51e-35,108;CL:0000838,1.22e-21,52;CL:0000542,4.33e-21,53;CL:0000051,4.33e-21,53;CL:0002320,6.65e-19,361;CL:0000134,6.81e-19,354;CL:0000094,1.03e-18,8;CL:0000219,2.79e-16,386;CL:0000081,3.65e-16,11;CL:0000791,1.06e-15,18;CL:0000789,1.06e-15,18;CL:0002420,1.06e-15,18;CL:0002419,1.06e-15,18;CL:0000790,1.06e-15,18;CL:0000236,1.06e-15,14;CL:0002393,1.44e-14,9;CL:0002397,1.44e-14,9;CL:0000624,3.59e-14,6;CL:0000048,2.17e-12,427;CL:0000034,5.30e-12,441;CL:0000723,5.87e-12,433;CL:0000084,1.84e-10,25;CL:0000827,1.84e-10,25;CL:0000623,2.09e-08,3;CL:0000825,2.09e-08,3;CL:0000945,3.79e-08,24;CL:0000826,3.79e-08,24;CL:0000775,5.07e-08,3;CL:0000898,8.19e-08,3;CL:0000767,8.97e-08,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.50e-45;42!CL:0000790;9.46e-16;18!CL:0000051;2.46e-13;53!CL:0000049;1.79e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.25e-27!102;UBERON:0003061!6.25e-27!102;UBERON:0002371!1.09e-22!80;UBERON:0002193!1.48e-22!112;UBERON:0001474!9.50e-22!86;UBERON:0004765!5.43e-19!101;UBERON:0001434!5.43e-19!101;UBERON:0002384!3.09e-18!375;UBERON:0002405!1.82e-14!115;UBERON:0002204!1.24e-07!167;UBERON:0003081!1.77e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.01e-35,76;UBERON:0002390,4.93e-35,98;UBERON:0003061,4.93e-35,98;UBERON:0001474,2.86e-32,82;UBERON:0002193,1.39e-30,108;UBERON:0002405,1.93e-30,93;UBERON:0004765,2.19e-28,90;UBERON:0001434,2.06e-24,100;UBERON:0002384,7.20e-18,371;UBERON:0003081,6.92e-12,203;UBERON:0002204,2.51e-10,167 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,0,0.446961094427288,0,0,0,0.261185628199839,0.245733936501509,0,0.218441372130172,0,0.123766352960047,0,0,0,0.730310090387373,0,0.123121058076788,0,0,0.286235987131057,0,0.376627918784408,0.229240217243854,0.0821005894499457,0.157421562627358,6.68719270643137,4.22212337906934,3.8704030829019,0,0,0.369754010166788,0.46480320348181,0,0.880801318004542,6.09394949385065,5.41470008169383,4.77423915574874,0,0.647787332037959,0.257575567634187,1.59938062657521,0.755751887377619,0.970336244751265,4.64858073811369,2.46700732813095,4.33588919253145,2.58923153089935,4.09857130446561,5.43909128743746,4.48169384957604,4.51839278508678,13.5426486594342,2.44715041405386,2.45615535052061,2.69668181334102,3.67300670845083,2.88836124368484,7.67204550958849,0.989553900560148,1.19678194572979,1.70489900213078,3.19230162491442,3.97169657283798,2.4912889959823,3.76872997885115,2.60741459210101,5.42972111762792,3.63239701580021,4.05105399586321,4.43047342417238,2.74631872205524,2.76385589954557,3.56419697364239,2.02191536063691,1.95229960693958,1.12507910687956,1.42506371870624,1.79025009479181,0.730656615058536,3.51992488922645,1.63841583378639,3.55803701545422,1.28019066769952,1.60158394814405,1.14950487990897,1.98313461835459,3.81621501814146,4.55370375287559,2.93618594685469,2.6759125968766,0,1.68152568894461,0.263384084775077,6.29471264364266,4.32311839024081,5.96244347098577,0.668745981562712,5.86660079940463,4.73447805734733,5.84480185223734,0.445641827540694,3.53527088969805,2.65840673500345,2.43723477388514,0.25618263945135,0.260118695119756,0.164437904603676,1.65810010671509,0.579606171470105,4.59688345802387,3.21048993707656,4.18142095219907,0,5.74830740402882,4.46715679127419,3.79529538029254,1.27426165729639,0,0,1.20460095262218,0.895906278080929,1.24930726552346,0.710331756132051,0,5.64498881029251,5.88368430723716,7.38604459802275,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0.370784442784429,0,0,0,1.19245312152671,0.571994910780128,0.74291500265913,0,0,0.347140501607594,0,0,0,0.417989933073621,0,0,0,0,0,0,0,0,0,0,0,1.53316637465883,0,0,15.8136500923276,23.2668158488995,0,0,0,0,0.286836620748814,0,1.12135520028461,0,0,0,0,0.326923806226917,0.454072282934794,0,0.234321431833797,0,0,0,0,0.161872944368132,0.140450806702248,0.204154171254893,0.245668634623536,0,0,0,0,0,0.168336113954066,0,0,0.438977620880838,0,0.300476117813194,0,0,0.213557388818567,0,0,0.206105058476878,0,0.37223371266318,0,0.0974370051611986,0.252433774244115,0.0920498986422993,0.80823028409406,0,0,0.169560592310488,0,0,0,0.243947412259191,0.265059536642971,0.116193942869518,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0.134831308160164,0.196221465125346,0.38474715694639,0,0,0.4115740113314,0,0,0,0,0.441463099414651,0.122988438543114,0,0,0,0.301586917234893,0.0925884451585296,0.325808305310325,0,0,0.115930404975077,0,0,0,0.190254152234598,0.790204397959275,1.71697232418975,0,0.234004265139238,0.148631162288728,0,0.16798212819886,0,0,0,0,0.492663237895943,0,0.829312462163088,0.288239906833923,1.2624243342638,0,0,2.34434894420094,0,0,0,0,0.224262168690721,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0.823240336780769,0,0,0,0,0,0.099972991182057,0,1.00451418286425,0,0.239624855491583,0,0,0,0,0,0,6.89607660706745,8.19384784466166,8.34229735818364,0,0,0,0,0,2.99602809578873,8.97484377612075,13.2612964299531,0,0,0,0,0,0,0,0,0,0,0,0,0.173767228936166,0,1.02943027143257,0.82707210449155,2.80428461064202,1.17400313583789,0.909382714338778,0,0,0,0.153461973288062,0,0,0,0,0,0.154209693802656,0,0,0,0,0.241718899183244,0,0,0.114814448164607,0,0.131124414959424,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0.261435451024901,0,0,0,0,0.183138929636687,0.082509499920588,0,0,0,0.096670718292122,0.154048617114644,0.15350367472613,0,0.107420244868274,0.290033387828457,0.0852266274161009,0.0890320356467374,0.165284915360978,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0.632758849437452,0,0,0,0,0,0.179872457583315,0,0,0,0,0.421258456238981,0,0,0,0,0,0,0.551365343546124,0.66343897524122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384888450902048,0,0,0,0,0,0,0,0,0.764637207142375,0.569647187174163,0,0.411362273086194,0.648473311192717,0.540031437238115,0,0,0,0.245040215981032,0,0.28853842595289,0.213425530045242,0.159426272728822,0.199579371432817,0,0,0,0,0.228234679033192,0.156679895773023,0,0,0.1605880751037,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0.18714054040822,0,0.121360521749513,0,0.284136146806413,0.23874448473769,0.593929361665277,0.307160702099232,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,4.7896618469388,0,0,0.0927680981618513,0,0,0.174919999992391,0,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0,0,0,0,0,0.23056390438806,0,0.108647371922008,0,0.0915975934018623,0,0,0.31396051279005,0.332423363800313,0,0,0.503464760927528,0,0.317873157960757,0.210998064528027,0,0.141353071433941,0,0,0,0,1.48260564340311,0.123563938946503,0.208843899010911,0.067401132980677,0,0,0,0,0,0,0,0,0.063186579628488,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0.0730893170861856,0.164230914106418,0,0,0,0,0,0,0,0,0,0,0.144090417154106,0,0,0.14405479798815,0.124252535565433,0,0,0,0.101998217636322,0,0,0,0,0,0.262887354279314,0,0.229160424011684,0,0,0,0,0,0,0,0.0787831823072236,0.164831716762333,0,0.0984274815147488,0.254019996197353,0,0,0,0.137539436597234,0,0.2249738915515,0.77380195455795,0,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0.113312091520126,0,0,0,0.13223260174269,0,0,0,0,0,0,0.197611631897944,0,0,0,0.2506898940227,0.306345576763462,0,0,0,0,0,0,0,0,0.138348634936231,0,0.151649117541648,0,0,0,0,0,0,0,0,0.251567901752575,0,0.228840068396924,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0.256241518587947,0,0.607719912354764,0.138258436151731,0.584580926518165,0.398594520940089,0,0,0,0,0.19998739585493,0.106691729694141,0.688859918643263,0,0,0,0.622077260032973,0,0,0.157265941855896,0,0.169732529954025,0,0.123935764259002,0,0,0.630893960010027,0,0,0,0.0642292250964595,0,0.159633859057151,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0.397832444232549,0,0,0,0.261906694481422,0,0,0,0.781078098613847,0,0,0,0,0.496211178389294,0.351742488719241,0,0,0,0,0,0,0.115233987555779,0.171488009437418,0,0.197318320688547,0.118193840883968,0,0,0,0,0,0,0,0,0.158013611732727,0,0,0,0,0,0,0,0,0.0852134047591577,0,0.22910686854405,0,0,0,0.098150233615243,0,0,0,0,0,0,0.397901550322736,0,0,0.109940516745429,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.187967835959707,0.128915775947154,0,0,0,0.0802413666891683,0,0,0,0.157771562193185,0.0679914901909147,0,0,0,0,0,0.126166424835079,0,0.380095503034311,0,0,0,0.250707539292375,0.0757786982182394,0.267964130156178,0,0.103432995861895,0,0,0,1.11734485732544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p@chr3:53164571..53164592,+ | |||
}} |
Revision as of 19:15, 21 January 2014
Short description: | p@chr3:53164571..53164592, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:53164571..53164592, + |
Coexpression cluster: | C427_Eosinophils_CD4_Peripheral_Neutrophils_Basophils_mature_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.01e-35 | 76 |
hematopoietic system | 4.93e-35 | 98 |
blood island | 4.93e-35 | 98 |
bone element | 2.86e-32 | 82 |
hemolymphoid system | 1.39e-30 | 108 |
immune system | 1.93e-30 | 93 |
skeletal element | 2.19e-28 | 90 |
skeletal system | 2.06e-24 | 100 |
connective tissue | 7.20e-18 | 371 |
lateral plate mesoderm | 6.92e-12 | 203 |
musculoskeletal system | 2.51e-10 | 167 |