FFCP PHASE1:Mm9::chr14:54788271..54788280,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=33|UniProt=|association_with_transcript=-80bp_to_uc007tuh.1_5end|description=CAGE_peak_5_at_uc007tuh.1_5end|id=chr14:54788271..54788280,+|ontology_enrichment_celltype=CL:0000791!1.90e-32!9;CL:0000789!1.90e-32!9;CL:0002420!1.90e-32!9;CL:0002419!1.90e-32!9;CL:0000790!1.90e-32!9;CL:0000624!6.01e-29!8;CL:0000084!2.72e-26!11;CL:0000827!2.72e-26!11;CL:0000838!5.54e-24!12;CL:0000893!3.29e-22!6;CL:0002489!3.29e-22!6;CL:0000898!3.29e-22!6;CL:0000809!3.29e-22!6;CL:0000810!3.29e-22!6;CL:0000895!3.29e-22!6;CL:0000808!3.29e-22!6;CL:0000894!3.29e-22!6;CL:0000806!3.29e-22!6;CL:0000807!3.29e-22!6;CL:0000805!3.29e-22!6;CL:0002425!3.29e-22!6;CL:0002436!3.29e-22!6;CL:0002427!3.29e-22!6;CL:0002428!3.29e-22!6;CL:0002429!3.29e-22!6;CL:0002433!3.29e-22!6;CL:0002431!3.29e-22!6;CL:0002432!3.29e-22!6;CL:0000542!5.00e-22!13;CL:0000051!5.00e-22!13;CL:0000738!1.67e-16!17;CL:0002087!1.67e-16!17;CL:0002031!9.45e-11!25;CL:0000988!4.46e-08!32;CL:0002032!4.46e-08!32;CL:0000037!4.46e-08!32;CL:0000566!4.46e-08!32;CL:0000837!4.46e-08!32|ontology_enrichment_celltype_v019_2=CL:0000791,8.81e-31,9;CL:0000789,8.81e-31,9;CL:0002420,8.81e-31,9;CL:0002419,8.81e-31,9;CL:0000790,8.81e-31,9;CL:0000084,2.91e-25,11;CL:0000827,2.91e-25,11;CL:0000838,3.43e-23,12;CL:0000624,1.03e-22,8;CL:0000542,1.95e-21,13;CL:0000051,1.95e-21,13;CL:0000893,2.19e-17,6;CL:0002489,2.19e-17,6;CL:0000898,2.19e-17,6;CL:0000809,2.19e-17,6;CL:0000810,2.19e-17,6;CL:0000895,2.19e-17,6;CL:0000808,2.19e-17,6;CL:0000894,2.19e-17,6;CL:0000806,2.19e-17,6;CL:0000807,2.19e-17,6;CL:0000805,2.19e-17,6;CL:0002425,2.19e-17,6;CL:0002436,2.19e-17,6;CL:0002427,2.19e-17,6;CL:0002428,2.19e-17,6;CL:0002429,2.19e-17,6;CL:0002433,2.19e-17,6;CL:0002431,2.19e-17,6;CL:0002432,2.19e-17,6;CL:0000738,1.80e-16,17;CL:0002087,1.80e-16,17;CL:0000625,7.11e-12,1;CL:0002031,2.76e-11,25;CL:0000988,7.38e-09,32;CL:0002032,7.38e-09,32;CL:0000037,7.38e-09,32;CL:0000837,7.38e-09,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002370!4.33e-43!23;UBERON:0000974!4.33e-43!23;UBERON:0004807!4.33e-43!23;UBERON:0005058!4.33e-43!23;UBERON:0003351!4.33e-43!23;UBERON:0009113!4.33e-43!23;UBERON:0003295!4.33e-43!23;UBERON:0009722!4.33e-43!23;UBERON:0005562!4.33e-43!23;UBERON:0007690!4.33e-43!23;UBERON:0006562!3.64e-41!24;UBERON:0003408!3.64e-41!24;UBERON:0001557!3.64e-41!24;UBERON:0001042!3.64e-41!24;UBERON:0008814!3.64e-41!24;UBERON:0009145!3.64e-41!24;UBERON:0004177!1.47e-37!29;UBERON:0000072!3.04e-36!27;UBERON:0000063!3.10e-27!35;UBERON:0002193!4.40e-24!48;UBERON:0002390!5.04e-23!45;UBERON:0003061!5.04e-23!45;UBERON:0000065!8.81e-23!41;UBERON:0001004!3.66e-22!42;UBERON:0005057!6.42e-20!51;UBERON:0003929!3.69e-16!55;UBERON:0002405!2.11e-15!70;UBERON:0002368!1.53e-14!60;UBERON:0003081!1.81e-14!88;UBERON:0002530!3.59e-13!65;UBERON:0000490!6.37e-13!66;UBERON:0005911!3.22e-12!69;UBERON:0000949!1.43e-11!72;UBERON:0000064!7.76e-10!99;UBERON:0001041!1.63e-09!92;UBERON:0000153!2.57e-09!94;UBERON:0007811!3.73e-09!86;UBERON:0000077!7.60e-09!97;UBERON:0001048!4.29e-07!147|ontology_enrichment_uberon_v019_2=UBERON:0002370,3.03e-17,23;UBERON:0000974,3.03e-17,23;UBERON:0004807,3.03e-17,23;UBERON:0005058,3.03e-17,23;UBERON:0003351,3.03e-17,23;UBERON:0009113,3.03e-17,23;UBERON:0003295,3.03e-17,23;UBERON:0009722,3.03e-17,23;UBERON:0005562,3.03e-17,23;UBERON:0007690,3.03e-17,23;UBERON:0006562,1.56e-16,24;UBERON:0003408,1.56e-16,24;UBERON:0001557,1.56e-16,24;UBERON:0001042,1.56e-16,24;UBERON:0008814,1.56e-16,24;UBERON:0009145,1.56e-16,24;UBERON:0000072,1.03e-14,27;UBERON:0004177,1.05e-13,29;UBERON:0005057,1.05e-13,29;UBERON:0000077,2.25e-11,35;UBERON:0007811,4.64e-11,36;UBERON:0000065,1.02e-09,41;UBERON:0001004,1.74e-09,42;UBERON:0000153,2.88e-09,43;UBERON:0002390,7.43e-09,45;UBERON:0003061,7.43e-09,45;UBERON:0002193,2.66e-08,48;UBERON:0002405,2.66e-08,48;UBERON:0003929,3.05e-07,55|phase1_expression=0,0,0,0,0,0,0,0.258246646883153,0.703943610758334,0.70219357896598,1.36974374580404,1.35612670292072,0.513602189793617,1.83582845079895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45072428402269,1.00828139742739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.776813650941515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136694227721025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26404448251271,0,0,0,0.716106782669926,0.79472541912506,0.961563596159751,1.18151621739662,1.31256384932592,0.609654453239999,0.201652370273681,0.682205165178267,0.384847366561318,0.350630706544707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p5@uc007tuh.1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=33 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-80bp_to_uc007tuh.1_5end | |||
|cluster_id=chr14:54788271..54788280,+ | |||
|description=CAGE_peak_5_at_uc007tuh.1_5end | |||
|id=chr14:54788271..54788280,+ | |||
|ontology_enrichment_celltype=CL:0000791!1.90e-32!9;CL:0000789!1.90e-32!9;CL:0002420!1.90e-32!9;CL:0002419!1.90e-32!9;CL:0000790!1.90e-32!9;CL:0000624!6.01e-29!8;CL:0000084!2.72e-26!11;CL:0000827!2.72e-26!11;CL:0000838!5.54e-24!12;CL:0000893!3.29e-22!6;CL:0002489!3.29e-22!6;CL:0000898!3.29e-22!6;CL:0000809!3.29e-22!6;CL:0000810!3.29e-22!6;CL:0000895!3.29e-22!6;CL:0000808!3.29e-22!6;CL:0000894!3.29e-22!6;CL:0000806!3.29e-22!6;CL:0000807!3.29e-22!6;CL:0000805!3.29e-22!6;CL:0002425!3.29e-22!6;CL:0002436!3.29e-22!6;CL:0002427!3.29e-22!6;CL:0002428!3.29e-22!6;CL:0002429!3.29e-22!6;CL:0002433!3.29e-22!6;CL:0002431!3.29e-22!6;CL:0002432!3.29e-22!6;CL:0000542!5.00e-22!13;CL:0000051!5.00e-22!13;CL:0000738!1.67e-16!17;CL:0002087!1.67e-16!17;CL:0002031!9.45e-11!25;CL:0000988!4.46e-08!32;CL:0002032!4.46e-08!32;CL:0000037!4.46e-08!32;CL:0000566!4.46e-08!32;CL:0000837!4.46e-08!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,8.81e-31,9;CL:0000789,8.81e-31,9;CL:0002420,8.81e-31,9;CL:0002419,8.81e-31,9;CL:0000790,8.81e-31,9;CL:0000084,2.91e-25,11;CL:0000827,2.91e-25,11;CL:0000838,3.43e-23,12;CL:0000624,1.03e-22,8;CL:0000542,1.95e-21,13;CL:0000051,1.95e-21,13;CL:0000893,2.19e-17,6;CL:0002489,2.19e-17,6;CL:0000898,2.19e-17,6;CL:0000809,2.19e-17,6;CL:0000810,2.19e-17,6;CL:0000895,2.19e-17,6;CL:0000808,2.19e-17,6;CL:0000894,2.19e-17,6;CL:0000806,2.19e-17,6;CL:0000807,2.19e-17,6;CL:0000805,2.19e-17,6;CL:0002425,2.19e-17,6;CL:0002436,2.19e-17,6;CL:0002427,2.19e-17,6;CL:0002428,2.19e-17,6;CL:0002429,2.19e-17,6;CL:0002433,2.19e-17,6;CL:0002431,2.19e-17,6;CL:0002432,2.19e-17,6;CL:0000738,1.80e-16,17;CL:0002087,1.80e-16,17;CL:0000625,7.11e-12,1;CL:0002031,2.76e-11,25;CL:0000988,7.38e-09,32;CL:0002032,7.38e-09,32;CL:0000037,7.38e-09,32;CL:0000837,7.38e-09,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!4.33e-43!23;UBERON:0000974!4.33e-43!23;UBERON:0004807!4.33e-43!23;UBERON:0005058!4.33e-43!23;UBERON:0003351!4.33e-43!23;UBERON:0009113!4.33e-43!23;UBERON:0003295!4.33e-43!23;UBERON:0009722!4.33e-43!23;UBERON:0005562!4.33e-43!23;UBERON:0007690!4.33e-43!23;UBERON:0006562!3.64e-41!24;UBERON:0003408!3.64e-41!24;UBERON:0001557!3.64e-41!24;UBERON:0001042!3.64e-41!24;UBERON:0008814!3.64e-41!24;UBERON:0009145!3.64e-41!24;UBERON:0004177!1.47e-37!29;UBERON:0000072!3.04e-36!27;UBERON:0000063!3.10e-27!35;UBERON:0002193!4.40e-24!48;UBERON:0002390!5.04e-23!45;UBERON:0003061!5.04e-23!45;UBERON:0000065!8.81e-23!41;UBERON:0001004!3.66e-22!42;UBERON:0005057!6.42e-20!51;UBERON:0003929!3.69e-16!55;UBERON:0002405!2.11e-15!70;UBERON:0002368!1.53e-14!60;UBERON:0003081!1.81e-14!88;UBERON:0002530!3.59e-13!65;UBERON:0000490!6.37e-13!66;UBERON:0005911!3.22e-12!69;UBERON:0000949!1.43e-11!72;UBERON:0000064!7.76e-10!99;UBERON:0001041!1.63e-09!92;UBERON:0000153!2.57e-09!94;UBERON:0007811!3.73e-09!86;UBERON:0000077!7.60e-09!97;UBERON:0001048!4.29e-07!147 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,3.03e-17,23;UBERON:0000974,3.03e-17,23;UBERON:0004807,3.03e-17,23;UBERON:0005058,3.03e-17,23;UBERON:0003351,3.03e-17,23;UBERON:0009113,3.03e-17,23;UBERON:0003295,3.03e-17,23;UBERON:0009722,3.03e-17,23;UBERON:0005562,3.03e-17,23;UBERON:0007690,3.03e-17,23;UBERON:0006562,1.56e-16,24;UBERON:0003408,1.56e-16,24;UBERON:0001557,1.56e-16,24;UBERON:0001042,1.56e-16,24;UBERON:0008814,1.56e-16,24;UBERON:0009145,1.56e-16,24;UBERON:0000072,1.03e-14,27;UBERON:0004177,1.05e-13,29;UBERON:0005057,1.05e-13,29;UBERON:0000077,2.25e-11,35;UBERON:0007811,4.64e-11,36;UBERON:0000065,1.02e-09,41;UBERON:0001004,1.74e-09,42;UBERON:0000153,2.88e-09,43;UBERON:0002390,7.43e-09,45;UBERON:0003061,7.43e-09,45;UBERON:0002193,2.66e-08,48;UBERON:0002405,2.66e-08,48;UBERON:0003929,3.05e-07,55 | |||
|phase1_expression=0,0,0,0,0,0,0,0.258246646883153,0.703943610758334,0.70219357896598,1.36974374580404,1.35612670292072,0.513602189793617,1.83582845079895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45072428402269,1.00828139742739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.776813650941515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136694227721025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26404448251271,0,0,0,0.716106782669926,0.79472541912506,0.961563596159751,1.18151621739662,1.31256384932592,0.609654453239999,0.201652370273681,0.682205165178267,0.384847366561318,0.350630706544707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p5@uc007tuh.1 | |||
}} |
Latest revision as of 10:35, 4 August 2015
Short description: | p5@uc007tuh.1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_uc007tuh.1_5end |
Coexpression cluster: | MCL_coexpression_mm9:33 |
Association with transcript: | -80bp_to_uc007tuh.1_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 3.03e-17 | 23 |
neck | 3.03e-17 | 23 |
respiratory system epithelium | 3.03e-17 | 23 |
hemolymphoid system gland | 3.03e-17 | 23 |
pharyngeal epithelium | 3.03e-17 | 23 |
thymic region | 3.03e-17 | 23 |
pharyngeal gland | 3.03e-17 | 23 |
entire pharyngeal arch endoderm | 3.03e-17 | 23 |
thymus primordium | 3.03e-17 | 23 |
early pharyngeal endoderm | 3.03e-17 | 23 |
pharynx | 1.56e-16 | 24 |
gland of gut | 1.56e-16 | 24 |
upper respiratory tract | 1.56e-16 | 24 |
chordate pharynx | 1.56e-16 | 24 |
pharyngeal arch system | 1.56e-16 | 24 |
pharyngeal region of foregut | 1.56e-16 | 24 |
segment of respiratory tract | 1.03e-14 | 27 |
hemopoietic organ | 1.05e-13 | 29 |
immune organ | 1.05e-13 | 29 |
mixed endoderm/mesoderm-derived structure | 2.25e-11 | 35 |
craniocervical region | 4.64e-11 | 36 |
respiratory tract | 1.02e-09 | 41 |
respiratory system | 1.74e-09 | 42 |
anterior region of body | 2.88e-09 | 43 |
hematopoietic system | 7.43e-09 | 45 |
blood island | 7.43e-09 | 45 |
hemolymphoid system | 2.66e-08 | 48 |
immune system | 2.66e-08 | 48 |
gut epithelium | 3.05e-07 | 55 |