FFCP PHASE1:Hg19::chr5:139971675..139971722,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10307 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20708 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000507279_5end | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_3_at_APBB3_5end | |||
|id=chr5:139971675..139971722,- | |||
|ontology_enrichment_celltype=CL:0002057!5.11e-36!42;CL:0000766!4.05e-35!76;CL:0002194!8.15e-33!63;CL:0000576!8.15e-33!63;CL:0000040!8.15e-33!63;CL:0000559!8.15e-33!63;CL:0000860!3.63e-32!45;CL:0002009!4.96e-31!65;CL:0000839!4.75e-27!70;CL:0000557!2.51e-26!71;CL:0000738!9.74e-26!140;CL:0002087!1.45e-24!119;CL:0002031!2.06e-19!124;CL:0000763!1.92e-17!112;CL:0000049!1.92e-17!112;CL:0000037!1.25e-16!172;CL:0000566!1.25e-16!172;CL:0002032!3.70e-15!165;CL:0000837!3.70e-15!165;CL:0000988!5.18e-14!182;CL:0000094!2.93e-08!8;CL:0000134!6.87e-08!358;CL:0002393!1.01e-07!9;CL:0002397!1.01e-07!9;CL:0002320!4.45e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.64e-49;33!CL:0002057;2.64e-49;33!CL:0000473;1.32e-48;39!CL:0000234;1.32e-48;39!CL:0000576;1.77e-40;48!CL:0000766;9.54e-32;69!CL:0000763;6.08e-15;100!CL:0002087;2.04e-14;104!CL:0000094;4.53e-14;8!CL:0000738;8.26e-11;136!CL:0002393;2.44e-10;6!CL:0002397;2.44e-10;6!CL:0000235;3.92e-10;6!CL:0000081;1.05e-09;11!CL:0000988;4.18e-07;177!CL:0000775;8.77e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.17e-72,48;CL:0000234,1.17e-72,48;CL:0000766,3.79e-69,72;CL:0000860,1.38e-63,42;CL:0002057,1.38e-63,42;CL:0002194,1.27e-62,59;CL:0000576,1.27e-62,59;CL:0000040,1.27e-62,59;CL:0000559,1.27e-62,59;CL:0002009,4.95e-60,61;CL:0000839,3.06e-54,66;CL:0000557,3.48e-53,67;CL:0000738,1.18e-46,136;CL:0002087,5.66e-42,115;CL:0000763,2.07e-41,108;CL:0000049,2.07e-41,108;CL:0000037,8.37e-35,168;CL:0002031,8.42e-35,120;CL:0002032,3.44e-32,161;CL:0000837,3.44e-32,161;CL:0000988,6.49e-32,177;CL:0000134,7.30e-15,354;CL:0002320,4.07e-14,361;CL:0000094,4.37e-14,8;CL:0000034,3.89e-12,441;CL:0000723,9.20e-12,433;CL:0000048,9.71e-12,427;CL:0000219,1.59e-11,386;CL:0002393,9.22e-11,9;CL:0002397,9.22e-11,9;CL:0000235,4.07e-10,6;CL:0000081,1.03e-09,11;CL:0000775,8.64e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.73e-45;42!CL:0000049;4.56e-13;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.12e-30!102;UBERON:0003061!5.12e-30!102;UBERON:0002193!2.81e-26!112;UBERON:0002371!2.19e-23!80;UBERON:0001474!4.40e-20!86;UBERON:0004765!6.40e-19!101;UBERON:0001434!6.40e-19!101;UBERON:0007023!3.27e-16!115;UBERON:0002405!5.52e-16!115;UBERON:0003081!1.65e-15!216;UBERON:0002204!2.32e-13!167;UBERON:0000479!5.11e-08!787;UBERON:0000178!1.23e-07!15;UBERON:0000179!1.23e-07!15;UBERON:0000463!1.23e-07!15;UBERON:0002384!5.64e-07!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.33e-14;15!UBERON:0000179;2.33e-14;15!UBERON:0000463;2.33e-14;15!UBERON:0002390;7.95e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.13e-59,98;UBERON:0003061,6.13e-59,98;UBERON:0002193,2.12e-53,108;UBERON:0002371,9.65e-47,76;UBERON:0001474,4.20e-42,82;UBERON:0002405,4.19e-40,93;UBERON:0004765,6.91e-37,90;UBERON:0001434,1.48e-31,100;UBERON:0003081,1.04e-27,203;UBERON:0002204,4.65e-18,167;UBERON:0000926,1.11e-15,315;UBERON:0004120,1.11e-15,315;UBERON:0006603,1.11e-15,315;UBERON:0002384,8.83e-15,371;UBERON:0000178,2.42e-14,15;UBERON:0000179,2.42e-14,15;UBERON:0000463,2.42e-14,15 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.704772020479856,0,0,3.48935409640147,0,0,0,0,0,0,0,0,0,1.34465029290355,3.01347264011988,2.19093027116212,0,0,0,0,0,0,0,0,0,0,23.9952208877831,16.8884935162774,18.268302551297,0,0,0,0,0,0,22.713811749807,31.4854782528122,32.1176088659461,7.83704159839735,5.50619232232265,8.24241816429397,38.3851350378051,18.8937971844405,26.9268307918476,59.7342624847609,26.3147448333969,34.6871135402516,43.7292436329669,30.7392847834921,48.9518215869371,47.2301582609167,23.2374486090177,29.7938270507552,38.4014372666914,12.5536829026609,43.5963559823464,38.8726543311046,25.6743221660875,43.4749245543348,42.2209664238997,24.932957202704,31.5406315394194,32.79364396503,11.3477044938228,26.7813567068097,42.9635217589031,25.0311800841697,44.0893354751387,44.7995631948693,22.833213431229,42.0894975296376,14.1541041829001,11.2680278981473,25.7880133975302,62.9040334420373,72.2350854567645,56.8968576907664,0.855038231223746,1.19350006319454,1.82664153764634,0,1.09227722252426,0.889509253863555,3.41384178053206,0.400395987036012,2.87376219977242,0.661044872784862,0,0.569212969109448,2.93618594685469,0,1.32171328579026,2.80254281490768,0,0.196709770113833,0.393010762749165,0.616804496998528,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637130828648193,0,0,2.86092726247768,1.4078527226986,1.24930726552346,1.89421801635213,2.46338399076314,0,0,0.144824403882799,0,0,0,0,0,0.144846518960824,0,0.486634870302636,0,0,0.087834785693126,0.0654895377488563,0,0,0,0,0.132957960518865,0.953962497221368,1.14398982156026,0.371457501329565,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,19.7670626154095,139.600895093397,0,1.49091585508596,1.13967460498122,0.926864265692532,1.43418310374407,0.709336764396714,0.560677600142307,0,2.96001058100592,0,0.404132016209064,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0.103325781175765,1.18800285728205,0.247266929278557,0,0,0,0,0.277064115484183,0.438977620880838,0,0.150238058906597,0.226864366320042,0,0.427114777637135,0,0,0,0,0,0.168776332241266,0,0,0.0920498986422993,0.161646056818812,0,0,0,0.966304265816484,0.272746120590835,0.286804595389004,0,0,0,0,0,0,0,3.85944562915731,2.76269842704961,7.89425477654364,7.94067429836544,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0.109750285408626,2.24803506515239,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,32.5006448035364,4.68008530278475,28.8344454840133,0,0.335964256397719,0.708875486211932,0.0895585227028483,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,10.9461402577071,19.5880265658529,23.1917333431335,0,0,0,0,0.205476322550383,0.179060963239896,0,0.591092280605782,0,1.02674429023799,0,0,0,0.167516265334349,0,53.9285057241971,44.8742188806037,61.3334959885332,0,0,0,0,0.178428988797162,0.315404830067869,1.28855556491985,0.300946099727719,0,1.03473071292505,0,0,0,0,0,9.51132920165282,15.747136659759,9.28529752889966,0,0,0,0.248107807818777,0.306923946576125,0,1.02511319404561,0,0.965123526861645,1.48418066444991,0,0,0.0821271560138091,0,0,0,0.40101294060657,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382838137483752,0,0.929691098594572,0,0.6970372701606,0.308033580176089,1.59691809095107,0,0.18532421910392,1.5743737541619,0.372158369359667,0,0.762520775695299,0.767693373934002,0,0,0.78494864019923,0,0,0,0.404364963146632,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01455188481352,0.30982349809975,0.281695602532241,0,0.196498082026242,1.426684205925,0,0.422215270595328,0.329294892959902,0,0,0,0.670302275535787,2.17781969722645,0.659006605437454,0,0,0,0,21.3127995877511,29.0562138714103,34.1788312304498,18.105614934792,26.7385477506026,29.1812990036723,27.0015718619057,24.5868804651224,0,0,0,0,0,0,0,0,0.766021480529467,0,0,0,0,0.156679895773023,0,0,0,0,0,3.09154810280188,0,0,0,0,0,0,0,0,0,0,1.31857361344705,0,0.111443384277478,0,0,0.296964680832639,0,0,0.422008249231538,1.55832187032068,0,0,0.19924798825107,0.276283915531148,0,0,0,0,0,0,0,0.690503839458535,11.974154617347,1.11136990144637,0,0.463840490809256,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0.60298219312704,0,0.221158519862449,0.295547618953547,0.219385397153973,0,0,0.230850775511391,2.16489906109302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0.619202951523374,0,0,0,0,0.269604531922708,0,0,0,0,0,0,0,0,3.85438135733777,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0,0.872901148395775,0,0,0,0,0.189932387867636,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0.958337652243951,0,0.859530882839914,0,0,0,0,0.798716001995964,0.858452096273142,1.11585728720936,0.403100834920358,1.08089965062721,0,0,0,0,0,0,1.59045937961861,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0.709251365692784,0.157363764404994,0,0.179287339332845,0,0.714695326373367,0.662091970365432,0,0,0,0,0,0,0,0,0.732761168390412,0,0.517131825446202,0.79339561045614,0,0,2.45611048905698,1.10043013569766,0.828478110694391,2.97699613087171,0,0,0,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| |||
|short_description=p3@APBB3 | |||
}} |
Revision as of 07:49, 22 January 2014
Short description: | p3@APBB3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_APBB3_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 0bp_to_ENST00000507279_5end |
EntrezGene: | APBB3 |
HGNC: | 20708 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.13e-59 | 98 |
blood island | 6.13e-59 | 98 |
hemolymphoid system | 2.12e-53 | 108 |
bone marrow | 9.65e-47 | 76 |
bone element | 4.20e-42 | 82 |
immune system | 4.19e-40 | 93 |
skeletal element | 6.91e-37 | 90 |
skeletal system | 1.48e-31 | 100 |
lateral plate mesoderm | 1.04e-27 | 203 |
musculoskeletal system | 4.65e-18 | 167 |
mesoderm | 1.11e-15 | 315 |
mesoderm-derived structure | 1.11e-15 | 315 |
presumptive mesoderm | 1.11e-15 | 315 |
connective tissue | 8.83e-15 | 371 |
blood | 2.42e-14 | 15 |
haemolymphatic fluid | 2.42e-14 | 15 |
organism substance | 2.42e-14 | 15 |