FFCP PHASE1:Hg19::chr5:82833507..82833521,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C456 | |||
|description=CAGE_peak_at_chr5:82833507..82833521,+ | |||
|id=chr5:82833507..82833521,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.22e-20!42;CL:0000860!1.89e-18!45;CL:0002194!1.39e-10!63;CL:0000576!1.39e-10!63;CL:0000040!1.39e-10!63;CL:0000559!1.39e-10!63;CL:0002009!6.08e-10!65;CL:0000057!1.89e-09!75;CL:0002334!4.42e-09!12;CL:0000034!5.64e-09!444;CL:0000048!6.11e-09!430;CL:0000839!1.60e-08!70;CL:0000723!2.27e-08!436;CL:0000557!2.88e-08!71;CL:0000766!9.99e-08!76;CL:0000134!3.58e-07!358;CL:0002320!3.92e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.13e-35;33!CL:0002057;1.13e-35;33!CL:0000473;7.26e-28;39!CL:0000234;7.26e-28;39!CL:0000576;8.34e-18;48!CL:0000766;3.12e-09;69!CL:0000763;6.42e-08;100!CL:0000511;5.94e-07;1!CL:0002625;5.94e-07;1!CL:0000216;5.94e-07;1!CL:0000313;5.94e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.10e-32,42;CL:0002057,3.10e-32,42;CL:0000473,8.90e-28,48;CL:0000234,8.90e-28,48;CL:0002194,1.55e-21,59;CL:0000576,1.55e-21,59;CL:0000040,1.55e-21,59;CL:0000559,1.55e-21,59;CL:0002009,9.89e-21,61;CL:0000839,6.27e-19,66;CL:0000557,1.34e-18,67;CL:0000766,4.30e-17,72;CL:0002087,6.98e-11,115;CL:0000763,2.46e-10,108;CL:0000049,2.46e-10,108;CL:0002031,2.76e-10,120;CL:0000738,1.13e-08,136;CL:0000134,3.51e-07,354;CL:0000313,3.82e-07,1;CL:0000048,4.73e-07,427;CL:0000511,4.85e-07,1;CL:0002625,4.85e-07,1;CL:0000216,4.85e-07,1;CL:0002320,6.23e-07,361;CL:0000723,7.21e-07,433;CL:0002032,8.33e-07,161;CL:0000837,8.33e-07,161 | |||
|ontology_enrichment_development_v019=CL:0002057;1.07e-24;42 | |||
|ontology_enrichment_disease=DOID:2394!6.37e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2152;5.94e-07;1!DOID:2394;6.99e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,3.82e-07,1;DOID:2394,5.90e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0002204!5.20e-07!167;UBERON:0000991!6.46e-07!21;UBERON:0009196!6.46e-07!21;UBERON:0009117!6.46e-07!21;UBERON:0005564!6.46e-07!21;UBERON:0002384!7.80e-07!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0004909;3.04e-12;2!UBERON:0000992;2.09e-07;13!UBERON:0001136;5.94e-07;1!UBERON:0001343;5.94e-07;1!UBERON:0004911;5.94e-07;1!UBERON:0004910;5.94e-07;1!UBERON:0004813;5.94e-07;1!UBERON:0000991;9.63e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.99e-16,76;UBERON:0001474,1.27e-14,82;UBERON:0002390,2.34e-13,98;UBERON:0003061,2.34e-13,98;UBERON:0004765,4.84e-13,90;UBERON:0004909,1.62e-12,2;UBERON:0002405,1.62e-12,93;UBERON:0002193,8.38e-12,108;UBERON:0000926,1.06e-11,315;UBERON:0004120,1.06e-11,315;UBERON:0006603,1.06e-11,315;UBERON:0001434,2.03e-11,100;UBERON:0003081,4.25e-10,203;UBERON:0002204,1.83e-08,167;UBERON:0000992,1.73e-07,13;UBERON:0004911,3.82e-07,1;UBERON:0001136,4.85e-07,1;UBERON:0001343,4.85e-07,1;UBERON:0004910,4.85e-07,1;UBERON:0005154,4.85e-07,1;UBERON:0005295,4.85e-07,1;UBERON:0004813,4.85e-07,1;UBERON:0005297,4.85e-07,1;UBERON:0005294,4.85e-07,1;UBERON:0010141,4.85e-07,1;UBERON:0005891,4.85e-07,1;UBERON:0000991,8.03e-07,21;UBERON:0009196,8.03e-07,21;UBERON:0009117,8.03e-07,21;UBERON:0005564,8.03e-07,21 | |||
|phase1_expression=0.726713517082227,0.642301571672949,0,2.00146596706261,0,0,0,0,0.522371256399677,0,0,0,0,0.247532705920093,0,0.672325146451775,0.602694528023977,0.730310090387373,1.46379839637152,0,0,0,0.572471974262113,0.547497700291537,0.251085279189606,0,0,0,0,0.383829398097213,0,0,0,0,0,0,0,0,0.802177789880567,0.217010870715852,0,0,0,1.59938062657521,0,0,1.85943229524548,1.6446715520873,0.619412741790207,2.58923153089935,1.0246428261164,0.47296445977717,2.75796544589295,1.93645405075148,0,2.82363509313907,0.818718450173537,0.674170453335254,3.36692281607993,0.320929027076094,1.27867425159808,1.9791078011203,0.398927315243264,0.852449501065388,4.64334781805734,0,0,2.51248665256743,2.60741459210101,0.217188844705117,2.42159801053347,0.736555271975129,0.316462387440884,0,0,0.209658645508376,0.898629049171961,1.20141514273205,0.64290234678832,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24930726552346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.665188192387692,0.351339142772504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0.264818361626438,1.72101972449288,0.709336764396714,0.560677600142307,0,0.24666754841716,0,0.134710672069688,0.163461903113459,0,0.576175924479999,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0.247266929278557,0,0,0,0.125118519871964,0,0,0.30648779579902,0.150238058906597,0,0.717558542755448,0.640672166455702,0.211931901159562,0,0,0,0,0,0.68205903612839,0.252433774244115,0.184099797284599,0.484938170456436,0.710019185033229,0.10075209822764,0,0,0,0,0.243947412259191,0,0.116193942869518,0.310983165046111,0.252320850875628,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0.115930404975077,0.587043471179108,0,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517086863031111,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.299918973546171,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0.892144943985809,0.315404830067869,0.117141414992713,0,0,0,0,0,0,0,0,0,0.862856803274467,0.320182673410333,0,0,0,0.248107807818777,0.920771839728375,2.24528075546459,0.128139149255701,0.511707249066704,1.28683136914886,0,0.308419387605311,0.355123450626254,0.410635780069046,1.55776328755086,0.813472649219715,0.120859449591622,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0.328014645699706,0,0,0,0,0,0,1.6068392984416,0.096670718292122,0,0.307007349452259,0,0,0.290033387828457,0,0.178064071293475,0,0.192190067365106,0,0,0,1.5740617341532,0,0,0,0,0,0.143124886741991,0,0.949138274156178,0,0,0,0,0,0.359744915166629,2.47083326762449,0,0,0,0,0,0.243713489631284,0,0,0.282810863907425,0,0,0.66343897524122,0.876901770507525,0,0,0.202910376962704,0.30982349809975,0,0,0,0,0,0.422215270595328,0.987884678879706,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,1.13929437434833,0.238231775457789,0.411362273086194,0,0.540031437238115,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0.494411622680279,0,0,0,0,0,0,0.933118762985422,0,0,0,0.197286811273867,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0.221158519862449,0,0,0,0,0,0.113942055847001,0,0,0,0,0.366390373607449,0.533034776018635,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0.30607276163049,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0.429765441419957,0,0.837847203816763,0,0,0,0.429226048136571,0,0.134366944973453,0.720599767084807,0,0,0,0,0,0,0,0.272406812223151,0.160753148465019,0.275078873194468,0.83088067605837,0,0,0,0,0,0,0,0,0,0,0,0,1.08599920350743,0,0.653174720218818,0,0,0,0,0,0,0,0,0.171086837884329,0,0,0.314408610199332,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0.3755727921195,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0.74627401443437,0.701139929541673,0.554805861502613,0,0,0,0.457680136793847,1.05861646634267,1.08806040407946,0.443565449968902,0.318593534327405,0,0.155262956876259,3.31764966272684,0.53168342911599,0,0.901545653983311,0,1.62748293281865,0.545545977607678,0.429642228169954,0.464033759878494,3.18476710958893,0.400027764663154,0.343395705182793,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0,1.28120759293973,0,0,0.138258436151731,0,0,0,0.327609848846413,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0.157265941855896,0.109209638192014,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0.756215088665154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0.342976018874837,0.135939465953663,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0.173858272302579,0,0,0,0,0,0,0,0.423387050190929,0,0,0.955538938977433,1.78968690876468,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0.339854229375634,0,0,0,0,0,0,0,0,0,0,0,0,0,0.743990036333503,0.46217562863141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| |||
|short_description=p@chr5:82833507..82833521,+ | |||
}} |
Revision as of 06:17, 22 January 2014
Short description: | p@chr5:82833507..82833521, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_at_chr5:82833507..82833521, + |
Coexpression cluster: | C456_Fibroblast_Smooth_CD14_Preadipocyte_Lens_mesenchymal_serous |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.10e-32 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.10e-32 | 42 |
defensive cell | 8.90e-28 | 48 |
phagocyte | 8.90e-28 | 48 |
monopoietic cell | 1.55e-21 | 59 |
monocyte | 1.55e-21 | 59 |
monoblast | 1.55e-21 | 59 |
promonocyte | 1.55e-21 | 59 |
macrophage dendritic cell progenitor | 9.89e-21 | 61 |
myeloid lineage restricted progenitor cell | 6.27e-19 | 66 |
granulocyte monocyte progenitor cell | 1.34e-18 | 67 |
myeloid leukocyte | 4.30e-17 | 72 |
nongranular leukocyte | 6.98e-11 | 115 |
myeloid cell | 2.46e-10 | 108 |
common myeloid progenitor | 2.46e-10 | 108 |
hematopoietic lineage restricted progenitor cell | 2.76e-10 | 120 |
leukocyte | 1.13e-08 | 136 |
mesenchymal cell | 3.51e-07 | 354 |
serous secreting cell | 3.82e-07 | 1 |
multi fate stem cell | 4.73e-07 | 427 |
androgen binding protein secreting cell | 4.85e-07 | 1 |
seminiferous tubule epithelial cell | 4.85e-07 | 1 |
Sertoli cell | 4.85e-07 | 1 |
connective tissue cell | 6.23e-07 | 361 |
somatic stem cell | 7.21e-07 | 433 |
hematopoietic oligopotent progenitor cell | 8.33e-07 | 161 |
hematopoietic multipotent progenitor cell | 8.33e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.99e-16 | 76 |
bone element | 1.27e-14 | 82 |
hematopoietic system | 2.34e-13 | 98 |
blood island | 2.34e-13 | 98 |
skeletal element | 4.84e-13 | 90 |
epithelium of gonad | 1.62e-12 | 2 |
immune system | 1.62e-12 | 93 |
hemolymphoid system | 8.38e-12 | 108 |
mesoderm | 1.06e-11 | 315 |
mesoderm-derived structure | 1.06e-11 | 315 |
presumptive mesoderm | 1.06e-11 | 315 |
skeletal system | 2.03e-11 | 100 |
lateral plate mesoderm | 4.25e-10 | 203 |
musculoskeletal system | 1.83e-08 | 167 |
female gonad | 1.73e-07 | 13 |
epithelium of female gonad | 3.82e-07 | 1 |
mesothelium | 4.85e-07 | 1 |
seminiferous tubule of testis | 4.85e-07 | 1 |
epithelium of male gonad | 4.85e-07 | 1 |
epithelial cord | 4.85e-07 | 1 |
sex cord | 4.85e-07 | 1 |
seminiferous tubule epithelium | 4.85e-07 | 1 |
testis sex cord | 4.85e-07 | 1 |
genital ridge | 4.85e-07 | 1 |
primitive sex cord of indifferent gonad | 4.85e-07 | 1 |
coelomic epithelium | 4.85e-07 | 1 |
gonad | 8.03e-07 | 21 |
indifferent external genitalia | 8.03e-07 | 21 |
indifferent gonad | 8.03e-07 | 21 |
gonad primordium | 8.03e-07 | 21 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 3.82e-07 | 1 |
ovarian cancer | 5.90e-07 | 14 |