FFCP PHASE1:Hg19::chr9:16138889..16138902,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr9:16138889..16138902,- | |||
|id=chr9:16138889..16138902,- | |||
|ontology_enrichment_celltype=CL:0000188!1.03e-20!9;CL:0000327!9.17e-16!14;CL:0000055!1.64e-12!180;CL:0000499!4.01e-11!27;CL:0000128!1.00e-10!7;CL:0000126!1.00e-10!7;CL:0000127!1.00e-10!7;CL:0002453!1.00e-10!7;CL:0002603!1.99e-10!3;CL:0000594!3.44e-10!3;CL:0002564!6.09e-10!3;CL:0000064!1.87e-09!3;CL:0005012!1.87e-09!3;CL:0000067!1.87e-09!3;CL:0002304!1.87e-09!3;CL:0000708!1.87e-09!3;CL:0000667!2.90e-08!6;CL:0000058!2.90e-08!6;CL:0000138!2.90e-08!6;CL:0000153!4.20e-08!9;CL:0000447!4.20e-08!9;CL:0000630!4.46e-08!9;CL:0002602!1.33e-07!2;CL:0002549!1.46e-07!2;CL:0002575!5.24e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0002603;8.68e-36;3!CL:0002549;1.01e-24;2!CL:0002602;3.33e-24;2!CL:0002564;9.24e-17;3!CL:0000594;1.74e-16;3!CL:0000128;9.65e-16;7!CL:0000126;9.65e-16;7!CL:0000127;9.65e-16;7!CL:0000188;3.04e-12;9!CL:0000680;1.38e-07;7!CL:0000243;8.50e-07;15!CL:0000125;8.50e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002603,1.40e-35,3;CL:0002602,1.02e-24,2;CL:0002549,1.45e-24,2;CL:0002564,1.08e-16,3;CL:0000594,1.74e-16,3;CL:0000128,1.18e-15,7;CL:0000126,1.18e-15,7;CL:0000127,1.18e-15,7;CL:0002453,1.18e-15,7;CL:0000188,3.16e-12,9;CL:0000243,9.21e-07,15;CL:0000125,9.21e-07,15;CL:0000030,9.21e-07,15;CL:0000339,9.21e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000339;8.50e-07;15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002200!2.36e-12!11;UBERON:0006876!2.36e-12!11;UBERON:0002242!6.09e-10!3;UBERON:0003068!6.09e-10!3;UBERON:0002328!6.09e-10!3;UBERON:0004880!6.09e-10!3;UBERON:0005284!7.64e-10!5;UBERON:0003210!1.87e-09!3;UBERON:0001778!1.87e-09!3;UBERON:0001775!1.87e-09!3;UBERON:0009568!1.33e-07!2;UBERON:0002216!1.33e-07!2;UBERON:0002209!1.33e-07!2;UBERON:0002213!1.33e-07!2;UBERON:0004267!1.33e-07!2;UBERON:0006444!1.33e-07!2;UBERON:0001995!1.33e-07!2;UBERON:0004715!1.33e-07!2;UBERON:0001468!1.33e-07!2;UBERON:0001130!1.33e-07!2;UBERON:0001066!1.33e-07!2;UBERON:0003947!1.46e-07!2;UBERON:0005629!1.46e-07!2;UBERON:0005358!1.46e-07!2;UBERON:0001886!1.46e-07!2;UBERON:0004086!1.46e-07!2;UBERON:0005282!1.46e-07!2;UBERON:0005281!1.46e-07!2;UBERON:0000488!3.50e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0011135;1.15e-37;5!UBERON:0002216;1.15e-37;5!UBERON:0011134;1.15e-37;5!UBERON:0002209;1.15e-37;5!UBERON:0002213;1.15e-37;5!UBERON:0007844;1.15e-37;5!UBERON:0011138;1.15e-37;5!UBERON:0001130;1.15e-37;5!UBERON:0001066;1.15e-37;5!UBERON:0001468;1.15e-37;5!UBERON:0005629;1.01e-24;2!UBERON:0005358;1.01e-24;2!UBERON:0001886;1.01e-24;2!UBERON:0004086;1.01e-24;2!UBERON:0005282;1.01e-24;2!UBERON:0005281;1.01e-24;2!UBERON:0006444;3.33e-24;2!UBERON:0001995;3.33e-24;2!UBERON:0004715;3.33e-24;2!UBERON:0004905;1.06e-23;8!UBERON:0000982;1.06e-23;8!UBERON:0004770;1.06e-23;8!UBERON:0002037;2.94e-18;6!UBERON:0002242;9.24e-17;3!UBERON:0002418;1.74e-16;3!UBERON:0004755;1.74e-16;3!UBERON:0002680;2.23e-12;9!UBERON:0001895;2.23e-12;9!UBERON:0000075;5.29e-12;16!UBERON:0004765;3.24e-11;26!UBERON:0005284;1.77e-10;5!UBERON:0004733;2.01e-09;12!UBERON:0002028;2.01e-09;12!UBERON:0004732;9.74e-09;13!UBERON:0001134;4.06e-07;16!UBERON:0002036;4.06e-07;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011135,5.39e-38,5;UBERON:0002216,5.39e-38,5;UBERON:0011134,5.39e-38,5;UBERON:0002209,5.39e-38,5;UBERON:0002213,5.39e-38,5;UBERON:0005856,5.39e-38,5;UBERON:0005866,5.39e-38,5;UBERON:0005863,5.39e-38,5;UBERON:0007844,5.39e-38,5;UBERON:0011138,5.39e-38,5;UBERON:0001130,5.39e-38,5;UBERON:0001066,5.39e-38,5;UBERON:0001468,5.39e-38,5;UBERON:0006444,1.02e-24,2;UBERON:0001995,1.02e-24,2;UBERON:0004715,1.02e-24,2;UBERON:0005629,1.45e-24,2;UBERON:0005358,1.45e-24,2;UBERON:0001886,1.45e-24,2;UBERON:0004086,1.45e-24,2;UBERON:0005282,1.45e-24,2;UBERON:0005281,1.45e-24,2;UBERON:0004905,6.64e-24,8;UBERON:0000982,6.64e-24,8;UBERON:0004770,6.64e-24,8;UBERON:0002037,3.73e-18,6;UBERON:0006215,3.73e-18,6;UBERON:0002418,7.90e-17,3;UBERON:0004755,7.90e-17,3;UBERON:0002242,1.08e-16,3;UBERON:0003068,1.08e-16,3;UBERON:0002328,1.08e-16,3;UBERON:0004880,1.08e-16,3;UBERON:0002680,2.60e-12,9;UBERON:0001895,2.60e-12,9;UBERON:0010092,2.60e-12,9;UBERON:0000075,4.20e-12,16;UBERON:0005284,2.04e-10,5;UBERON:0004733,2.26e-09,12;UBERON:0002028,2.26e-09,12;UBERON:0007277,2.26e-09,12;UBERON:0004732,1.08e-08,13;UBERON:0003076,1.34e-07,15;UBERON:0003057,1.34e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,1.73272894144065,1.98838425436749,0.672325146451775,0,0,0,1.35433163884467,1.02000345622126,2.82109249330279,0.286235987131057,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.434539556882471,2.3858578411533,0.486634870302636,0.567208902984407,0.886917589850256,0.263504357079378,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06748995729705,0,0.311211035399766,0,0,3.48122083583342,1.15235184896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672786506072164,0.87192013766656,0.22001485746285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2269149171914,2.50085260529839,0.271265023699736,0,0,0,0,0.300946099727719,0,0,0,0.184369168541703,0,0.587403472388222,0.686286847621712,0,0,0,0,0,0,0,0,0,0,0,0,0,0.616838775210622,0.177561725313127,0.246381468041427,0,0.348631135379878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0.831076008928724,0,0,0,0,0,0,0,0,0,0,0,0,0.580024309752732,0.616194468458578,1.22802939780904,0.275673144969061,1.93356440762893,0.725083469571143,1.02271952899321,0.890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447764408660622,0,0,0.378806010550178,1.25783950876288,0,0,0,0,0.295710299979268,0,0,0,0.829412415681711,0,0,0,0,0,0,0,0,0,0.800055529326307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.762764190934334,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336283722218824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,1.38652688589425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0.0814032686109745,0,0,0,0,0.244482888365733,0,0,0,0 | |||
|short_description=p@chr9:16138889..16138902,- | |||
}} |
Revision as of 00:56, 23 January 2014
Short description: | p@chr9:16138889..16138902, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:16138889..16138902, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebellum | 1.40e-35 | 3 |
annulus pulposus cell | 1.02e-24 | 2 |
fibroblast of choroid plexus | 1.45e-24 | 2 |
nucleus pulposus cell of intervertebral disc | 1.08e-16 | 3 |
skeletal muscle satellite cell | 1.74e-16 | 3 |
oligodendrocyte | 1.18e-15 | 7 |
macroglial cell | 1.18e-15 | 7 |
astrocyte | 1.18e-15 | 7 |
oligodendrocyte precursor cell | 1.18e-15 | 7 |
cell of skeletal muscle | 3.16e-12 | 9 |
glial cell (sensu Vertebrata) | 9.21e-07 | 15 |
glial cell | 9.21e-07 | 15 |
glioblast | 9.21e-07 | 15 |
glioblast (sensu Vertebrata) | 9.21e-07 | 15 |