FFCP PHASE1:Mm9::chr6:91066755..91066769,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=33|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr6:91066755..91066769,-|id=chr6:91066755..91066769,-|ontology_enrichment_celltype=CL:0000988!7.84e-11!32;CL:0002032!7.84e-11!32;CL:0000037!7.84e-11!32;CL:0000566!7.84e-11!32;CL:0000837!7.84e-11!32;CL:0000838!4.29e-08!12;CL:0002031!6.14e-08!25;CL:0000084!7.64e-08!11;CL:0000827!7.64e-08!11;CL:0000542!2.77e-07!13;CL:0000051!2.77e-07!13;CL:0000791!6.47e-07!9;CL:0000789!6.47e-07!9;CL:0002420!6.47e-07!9;CL:0002419!6.47e-07!9;CL:0000790!6.47e-07!9|ontology_enrichment_celltype_v019_2=CL:0000988,3.28e-16,32;CL:0002032,3.28e-16,32;CL:0000037,3.28e-16,32;CL:0000837,3.28e-16,32;CL:0002031,7.81e-12,25;CL:0000838,2.38e-11,12;CL:0000084,5.62e-11,11;CL:0000827,5.62e-11,11;CL:0000542,3.85e-10,13;CL:0000051,3.85e-10,13;CL:0000791,1.36e-09,9;CL:0000789,1.36e-09,9;CL:0002420,1.36e-09,9;CL:0002419,1.36e-09,9;CL:0000790,1.36e-09,9;CL:0000624,1.20e-08,8;CL:0002320,2.03e-08,46;CL:0000134,2.03e-08,46;CL:0000049,1.18e-07,19;CL:0000738,8.67e-07,17;CL:0002087,8.67e-07,17|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!2.52e-12!48;UBERON:0004177!1.29e-11!29;UBERON:0002390!2.46e-11!45;UBERON:0003061!2.46e-11!45;UBERON:0002405!7.72e-10!70;UBERON:0002370!2.07e-09!23;UBERON:0000974!2.07e-09!23;UBERON:0004807!2.07e-09!23;UBERON:0005058!2.07e-09!23;UBERON:0003351!2.07e-09!23;UBERON:0009113!2.07e-09!23;UBERON:0003295!2.07e-09!23;UBERON:0009722!2.07e-09!23;UBERON:0005562!2.07e-09!23;UBERON:0007690!2.07e-09!23;UBERON:0000065!6.76e-09!41;UBERON:0006562!1.90e-08!24;UBERON:0003408!1.90e-08!24;UBERON:0001557!1.90e-08!24;UBERON:0001042!1.90e-08!24;UBERON:0008814!1.90e-08!24;UBERON:0009145!1.90e-08!24;UBERON:0001004!3.05e-08!42;UBERON:0005057!4.75e-08!51;UBERON:0001041!3.14e-07!92|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.43e-19,48;UBERON:0002405,1.43e-19,48;UBERON:0002390,5.85e-19,45;UBERON:0003061,5.85e-19,45;UBERON:0004177,7.91e-18,29;UBERON:0005057,7.91e-18,29;UBERON:0002370,3.00e-15,23;UBERON:0000974,3.00e-15,23;UBERON:0004807,3.00e-15,23;UBERON:0005058,3.00e-15,23;UBERON:0003351,3.00e-15,23;UBERON:0009113,3.00e-15,23;UBERON:0003295,3.00e-15,23;UBERON:0009722,3.00e-15,23;UBERON:0005562,3.00e-15,23;UBERON:0007690,3.00e-15,23;UBERON:0006562,2.80e-14,24;UBERON:0003408,2.80e-14,24;UBERON:0001557,2.80e-14,24;UBERON:0001042,2.80e-14,24;UBERON:0008814,2.80e-14,24;UBERON:0009145,2.80e-14,24;UBERON:0000077,4.29e-13,35;UBERON:0000065,4.45e-13,41;UBERON:0001004,1.61e-12,42;UBERON:0000072,7.96e-12,27;UBERON:0001041,1.90e-11,80;UBERON:0005911,3.44e-10,69;UBERON:0002384,2.03e-08,46;UBERON:0003929,3.71e-08,55;UBERON:0007811,1.05e-07,36;UBERON:0003081,4.17e-07,87|phase1_expression=0.320297694209588,0,0,0,0,0.16787927191189,0.233612640595526,11.4919757863003,6.47628121897667,8.19225842126977,2.05461561870606,2.95156988282745,13.6960583944965,15.0363092160676,2.6648780945253,4.656931149966,2.09868563438444,2.99689057090326,3.83920414096069,2.97072756258621,0.255129870453209,3.17731043842833,3.39559725880616,0.95995453676044,1.37645568640302,0,0,0,0,0,0,3.17515336729816,2.46025915033828,0,0.288851619751275,0.332469290716985,0.408338712524738,0.418531630736908,0.7813353445238,1.0470474879476,0.588231488031014,1.36609096991689,2.42755176515577,0,0,0,0,0.65407546914134,0,0,0,0,1.51004345451963,15.2326049822382,7.73015738027667,0,0,0,0.606949382578793,2.64495489636016,1.26766280701236,0,0,0,0,0,0.299600110518405,0.768436610643109,0.311068836925433,0.675029691658453,0.841299845405528,0.285650984403804,0.441737081903227,0.367472397644862,0.479227355091182,0,0,0,0,0.659431438650969,0.0914876436024097,0.52091337055676,0,0,0,0.589257170947335,0.427115042397309,0.559198337475902,0.075726193333184,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.22836775943812,6.47344709117929,0.29688427812965,0.520455980298408,0.608930956624282,0.461230994512117,0.452167921657868,0.117588707135705,0.125666591329675,0,0.289198713839823,5.30766331169925,0.970601099684455,4.41683036920787,5.33362778448744,0,0,0,0.766371165625774,8.98613433794402,5.39912457894067,7.62421362438388,0.149790639404823,0.457500602818626,0.251308704225729,0.347648640384553,0.511430914660661,0,0,0.101839363850316,2.23932547098167,0,0.210441855886474,1.04096354370163,0,0.360124259610698,0.452114453507145,0.544291993210623,0.512454881139399,0.281105173679186,0,0,0,0.879755620819744,0.219195732427575,0.556094498451196,0.348252166522167,0.205782136407943,0.59710280045548,10.5331978096985,4.11756651383544,7.10408748488982,0.621377317606506,0.234526059981096,0,0.710234206755631,0,0.154267112887378,0,0,0.350296027101508,0.16455984991348,0.164167464079095,0.0810688095458557,0,0.439100230582101,0,0,0.514523061896422,0.330418782983798,0,0.213288250535234,0.696710015581316,0.38660238396628,0.201683524623343,0,0.380451252225118,0,0.329397909448022,0.502670417600539,0.397912944082302,0.19496408711912,0,0.864552199498777,0,0,0.456994050438915,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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=33 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr6:91066755..91066769,- | |||
|description=CAGE_peak_at_chr6:91066755..91066769,- | |||
|id=chr6:91066755..91066769,- | |||
|ontology_enrichment_celltype=CL:0000988!7.84e-11!32;CL:0002032!7.84e-11!32;CL:0000037!7.84e-11!32;CL:0000566!7.84e-11!32;CL:0000837!7.84e-11!32;CL:0000838!4.29e-08!12;CL:0002031!6.14e-08!25;CL:0000084!7.64e-08!11;CL:0000827!7.64e-08!11;CL:0000542!2.77e-07!13;CL:0000051!2.77e-07!13;CL:0000791!6.47e-07!9;CL:0000789!6.47e-07!9;CL:0002420!6.47e-07!9;CL:0002419!6.47e-07!9;CL:0000790!6.47e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,3.28e-16,32;CL:0002032,3.28e-16,32;CL:0000037,3.28e-16,32;CL:0000837,3.28e-16,32;CL:0002031,7.81e-12,25;CL:0000838,2.38e-11,12;CL:0000084,5.62e-11,11;CL:0000827,5.62e-11,11;CL:0000542,3.85e-10,13;CL:0000051,3.85e-10,13;CL:0000791,1.36e-09,9;CL:0000789,1.36e-09,9;CL:0002420,1.36e-09,9;CL:0002419,1.36e-09,9;CL:0000790,1.36e-09,9;CL:0000624,1.20e-08,8;CL:0002320,2.03e-08,46;CL:0000134,2.03e-08,46;CL:0000049,1.18e-07,19;CL:0000738,8.67e-07,17;CL:0002087,8.67e-07,17 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.52e-12!48;UBERON:0004177!1.29e-11!29;UBERON:0002390!2.46e-11!45;UBERON:0003061!2.46e-11!45;UBERON:0002405!7.72e-10!70;UBERON:0002370!2.07e-09!23;UBERON:0000974!2.07e-09!23;UBERON:0004807!2.07e-09!23;UBERON:0005058!2.07e-09!23;UBERON:0003351!2.07e-09!23;UBERON:0009113!2.07e-09!23;UBERON:0003295!2.07e-09!23;UBERON:0009722!2.07e-09!23;UBERON:0005562!2.07e-09!23;UBERON:0007690!2.07e-09!23;UBERON:0000065!6.76e-09!41;UBERON:0006562!1.90e-08!24;UBERON:0003408!1.90e-08!24;UBERON:0001557!1.90e-08!24;UBERON:0001042!1.90e-08!24;UBERON:0008814!1.90e-08!24;UBERON:0009145!1.90e-08!24;UBERON:0001004!3.05e-08!42;UBERON:0005057!4.75e-08!51;UBERON:0001041!3.14e-07!92 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.43e-19,48;UBERON:0002405,1.43e-19,48;UBERON:0002390,5.85e-19,45;UBERON:0003061,5.85e-19,45;UBERON:0004177,7.91e-18,29;UBERON:0005057,7.91e-18,29;UBERON:0002370,3.00e-15,23;UBERON:0000974,3.00e-15,23;UBERON:0004807,3.00e-15,23;UBERON:0005058,3.00e-15,23;UBERON:0003351,3.00e-15,23;UBERON:0009113,3.00e-15,23;UBERON:0003295,3.00e-15,23;UBERON:0009722,3.00e-15,23;UBERON:0005562,3.00e-15,23;UBERON:0007690,3.00e-15,23;UBERON:0006562,2.80e-14,24;UBERON:0003408,2.80e-14,24;UBERON:0001557,2.80e-14,24;UBERON:0001042,2.80e-14,24;UBERON:0008814,2.80e-14,24;UBERON:0009145,2.80e-14,24;UBERON:0000077,4.29e-13,35;UBERON:0000065,4.45e-13,41;UBERON:0001004,1.61e-12,42;UBERON:0000072,7.96e-12,27;UBERON:0001041,1.90e-11,80;UBERON:0005911,3.44e-10,69;UBERON:0002384,2.03e-08,46;UBERON:0003929,3.71e-08,55;UBERON:0007811,1.05e-07,36;UBERON:0003081,4.17e-07,87 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0.16787927191189,0.233612640595526,11.4919757863003,6.47628121897667,8.19225842126977,2.05461561870606,2.95156988282745,13.6960583944965,15.0363092160676,2.6648780945253,4.656931149966,2.09868563438444,2.99689057090326,3.83920414096069,2.97072756258621,0.255129870453209,3.17731043842833,3.39559725880616,0.95995453676044,1.37645568640302,0,0,0,0,0,0,3.17515336729816,2.46025915033828,0,0.288851619751275,0.332469290716985,0.408338712524738,0.418531630736908,0.7813353445238,1.0470474879476,0.588231488031014,1.36609096991689,2.42755176515577,0,0,0,0,0.65407546914134,0,0,0,0,1.51004345451963,15.2326049822382,7.73015738027667,0,0,0,0.606949382578793,2.64495489636016,1.26766280701236,0,0,0,0,0,0.299600110518405,0.768436610643109,0.311068836925433,0.675029691658453,0.841299845405528,0.285650984403804,0.441737081903227,0.367472397644862,0.479227355091182,0,0,0,0,0.659431438650969,0.0914876436024097,0.52091337055676,0,0,0,0.589257170947335,0.427115042397309,0.559198337475902,0.075726193333184,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.22836775943812,6.47344709117929,0.29688427812965,0.520455980298408,0.608930956624282,0.461230994512117,0.452167921657868,0.117588707135705,0.125666591329675,0,0.289198713839823,5.30766331169925,0.970601099684455,4.41683036920787,5.33362778448744,0,0,0,0.766371165625774,8.98613433794402,5.39912457894067,7.62421362438388,0.149790639404823,0.457500602818626,0.251308704225729,0.347648640384553,0.511430914660661,0,0,0.101839363850316,2.23932547098167,0,0.210441855886474,1.04096354370163,0,0.360124259610698,0.452114453507145,0.544291993210623,0.512454881139399,0.281105173679186,0,0,0,0.879755620819744,0.219195732427575,0.556094498451196,0.348252166522167,0.205782136407943,0.59710280045548,10.5331978096985,4.11756651383544,7.10408748488982,0.621377317606506,0.234526059981096,0,0.710234206755631,0,0.154267112887378,0,0,0.350296027101508,0.16455984991348,0.164167464079095,0.0810688095458557,0,0.439100230582101,0,0,0.514523061896422,0.330418782983798,0,0.213288250535234,0.696710015581316,0.38660238396628,0.201683524623343,0,0.380451252225118,0,0.329397909448022,0.502670417600539,0.397912944082302,0.19496408711912,0,0.864552199498777,0,0,0.456994050438915,1.1270773567308,2.03651327845314,0.193952487167626,0.701358198903186,0.0632365371242573,0.147610147979602,0,0.370191491765402,0.296452627087149,2.66952169145751,3.34150291692445,5.39669069723649,4.46292267054706,2.894125917029,1.78238096246994,1.15078454980324,1.13494658742525,1.37280706594041,0,1.11642284300551,0.312037673114561,0.252578877947112,0,0.482443521363367,2.95605104266567,0.37898282354097,0.814824882210129,1.86719594352707,1.17345124144251,1.84256883185997,2.14239276797412,0.585400943573396,2.67979744980525,2.21464689648775,0.956728611944923,1.14704320301017,0.690739927463582,1.3018415272336,0,0,1.47529281905711,0,0,0,0,1.26235463602186,0.94652465824877,0.780877488593277,0.646270193198397,0.238968797952552,0.445597348164788,0,0,0.292255857911312,0.790575555893047,0,0,0,0.488660878060728,0.329940245945071,1.32745138339963,0.728341908464944,0.302323556964751,0.943025398779491,0.590603785761546,0.307435147943927,0.258428293168221,1.81766864738753,0.712994756769443,0.632073515871632,1.05418608574999,1.03135543248187,0,0,0.388076051348264,0.214337035031592,0,0.178368817602071,0,0.304464949114599,0.469343416127421,0,0,1.15420377059036,1.29171541356724,1.08563264870681,1.07435109602823,1.31312719796049,0.291480836629851,0.18542530201051,5.12612642393558,0.619160603889667,1.29636169158798,4.1441060541032,3.41735569302563,5.49067615695654,2.88963330989554,1.6794174278839,2.07299960706636,0,0.474503990371703,1.01659733563424,0.108005340821801,0,0.87345025498471,0.269728692769641,0.0826534557253359,0,0.259229946583586,0,0,0,0.496375471371293,0.777804753376191,0.258319646955462,0.168956125490778,0.234714477291508,1.0416350787516,2.72634295506848,0.483168241652012,0.576060012515731,8.84831137758899,2.43270258348197,2.05421914329655,4.54722880422283,6.08690765269437,6.75516606256301,6.85114062263822,6.64602872285597,8.07731599585181,8.23033511873998,7.66279007039988,7.11442529400193,7.79315917286669,8.88264456579924,0,0.221985953374065,0,0,0,0.187682475451182,0,0,0,0.564751842617067,0.920650473014354,1.14579102687879,0.859265911718438,0.685082519770642,0.755393897389701,0,0.900642406448441,0,0,0.207574695168353,1.59609949360412,1.36586884603307,0.729320151204882,1.67690530102386,1.2869045591501,1.11123363900808,0.618105171716683,1.92551525755089,0.252697211763798,1.01391719956096,0.754505365544305,0.842773567228942,0.704276676453562,0.804096565378586,1.42888107384922,0.347652977834566,0.964546102318525,0.824171801606613,0.735994600671987,0.685738504770831,1.06485483695602,0.953744759789284,0.290692833264657,0.846984423737976,0.846146078916765,0.548783918618318,1.31534855718921,0.543216455383447,1.12228454331548,0.474540072496697,0.591026894253381,0.818462086339379,0,1.15743966588685,1.498863467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| |||
|short_description=p@chr6:91066755..91066769,- | |||
}} |
Latest revision as of 07:41, 6 August 2015
Short description: | p@chr6:91066755..91066769, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:91066755..91066769, - |
Coexpression cluster: | MCL_coexpression_mm9:33 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 3.28e-16 | 32 |
hematopoietic oligopotent progenitor cell | 3.28e-16 | 32 |
hematopoietic stem cell | 3.28e-16 | 32 |
hematopoietic multipotent progenitor cell | 3.28e-16 | 32 |
hematopoietic lineage restricted progenitor cell | 7.81e-12 | 25 |
lymphoid lineage restricted progenitor cell | 2.38e-11 | 12 |
T cell | 5.62e-11 | 11 |
pro-T cell | 5.62e-11 | 11 |
lymphocyte | 3.85e-10 | 13 |
common lymphoid progenitor | 3.85e-10 | 13 |
mature alpha-beta T cell | 1.36e-09 | 9 |
alpha-beta T cell | 1.36e-09 | 9 |
immature T cell | 1.36e-09 | 9 |
mature T cell | 1.36e-09 | 9 |
immature alpha-beta T cell | 1.36e-09 | 9 |
CD4-positive, alpha-beta T cell | 1.20e-08 | 8 |
connective tissue cell | 2.03e-08 | 46 |
mesenchymal cell | 2.03e-08 | 46 |
common myeloid progenitor | 1.18e-07 | 19 |
leukocyte | 8.67e-07 | 17 |
nongranular leukocyte | 8.67e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.43e-19 | 48 |
immune system | 1.43e-19 | 48 |
hematopoietic system | 5.85e-19 | 45 |
blood island | 5.85e-19 | 45 |
hemopoietic organ | 7.91e-18 | 29 |
immune organ | 7.91e-18 | 29 |
thymus | 3.00e-15 | 23 |
neck | 3.00e-15 | 23 |
respiratory system epithelium | 3.00e-15 | 23 |
hemolymphoid system gland | 3.00e-15 | 23 |
pharyngeal epithelium | 3.00e-15 | 23 |
thymic region | 3.00e-15 | 23 |
pharyngeal gland | 3.00e-15 | 23 |
entire pharyngeal arch endoderm | 3.00e-15 | 23 |
thymus primordium | 3.00e-15 | 23 |
early pharyngeal endoderm | 3.00e-15 | 23 |
pharynx | 2.80e-14 | 24 |
gland of gut | 2.80e-14 | 24 |
upper respiratory tract | 2.80e-14 | 24 |
chordate pharynx | 2.80e-14 | 24 |
pharyngeal arch system | 2.80e-14 | 24 |
pharyngeal region of foregut | 2.80e-14 | 24 |
mixed endoderm/mesoderm-derived structure | 4.29e-13 | 35 |
respiratory tract | 4.45e-13 | 41 |
respiratory system | 1.61e-12 | 42 |
segment of respiratory tract | 7.96e-12 | 27 |
foregut | 1.90e-11 | 80 |
endo-epithelium | 3.44e-10 | 69 |
connective tissue | 2.03e-08 | 46 |
gut epithelium | 3.71e-08 | 55 |
craniocervical region | 1.05e-07 | 36 |
lateral plate mesoderm | 4.17e-07 | 87 |