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FFCP PHASE1:Mm9::chr9:56996145..56996181,-: Difference between revisions

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{{FFCP|EntrezGene=72774|HGNC=|MCL_coexpression_id=4|UniProt=Q3U296|association_with_transcript=-126bp_to_uc009pui.1,uc009puj.1_5end|description=CAGE_peak_3_at_Neil1_5end|id=chr9:56996145..56996181,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002031,1.15e-12,25;CL:0000838,1.46e-10,12;CL:0000542,1.31e-09,13;CL:0000051,1.31e-09,13;CL:0000988,4.30e-09,32;CL:0002032,4.30e-09,32;CL:0000037,4.30e-09,32;CL:0000837,4.30e-09,32;CL:0000084,6.29e-09,11;CL:0000827,6.29e-09,11;CL:0000791,1.03e-08,9;CL:0000789,1.03e-08,9;CL:0002420,1.03e-08,9;CL:0002419,1.03e-08,9;CL:0000790,1.03e-08,9;CL:0000738,1.42e-08,17;CL:0002087,1.42e-08,17;CL:0000624,2.66e-07,8|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!6.04e-09!29;UBERON:0002193!8.10e-08!48;UBERON:0003081!4.58e-07!88;UBERON:0003408!6.63e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.51e-24,48;UBERON:0002405,1.51e-24,48;UBERON:0004177,3.98e-22,29;UBERON:0005057,3.98e-22,29;UBERON:0002370,9.38e-21,23;UBERON:0000974,9.38e-21,23;UBERON:0004807,9.38e-21,23;UBERON:0005058,9.38e-21,23;UBERON:0003351,9.38e-21,23;UBERON:0009113,9.38e-21,23;UBERON:0003295,9.38e-21,23;UBERON:0009722,9.38e-21,23;UBERON:0005562,9.38e-21,23;UBERON:0007690,9.38e-21,23;UBERON:0002390,1.20e-20,45;UBERON:0003061,1.20e-20,45;UBERON:0006562,1.09e-19,24;UBERON:0003408,1.09e-19,24;UBERON:0001557,1.09e-19,24;UBERON:0001042,1.09e-19,24;UBERON:0008814,1.09e-19,24;UBERON:0009145,1.09e-19,24;UBERON:0000077,2.29e-17,35;UBERON:0000072,5.65e-17,27;UBERON:0000065,4.57e-12,41;UBERON:0001004,1.17e-11,42;UBERON:0007811,1.42e-11,36;UBERON:0003081,2.40e-11,87;UBERON:0000153,5.72e-09,43;UBERON:0003929,6.66e-07,55|phase1_expression=0.320297694209588,0.348975407639361,0,0,0.500895729946347,0.33575854382378,0.233612640595526,1.67860320474049,1.68946466582,1.87251621057595,0,0,2.05440875917447,1.13646523144697,1.33243904726265,0.607425802169478,0.699561878128147,2.99689057090326,3.15363197293199,2.97072756258621,0.340173160604279,0.893618560807968,1.30599894569468,1.27993938234725,1.83527424853736,0.57423196411502,0,0.215471232685889,0.190023419456374,0,0.443461021310609,0.635030673459631,1.23012957516914,0,0.288851619751275,0,0.204169356262369,0,0,0,0.588231488031014,0,0,0.377690453926732,0.101376931219515,0.183546752161682,0,1.74420125104357,0,0.194429899074283,0.139986421625363,1.43752564364972,8.89247812106003,2.17608642603403,2.35265659399725,0.257259436035947,0.573066879877513,0.515672092277442,0,0,0,0.338844532069132,0,0,0,0,0.299600110518405,1.53687322128622,0.103689612308478,0.270011876663381,0,0.285650984403804,0.220868540951614,0,0.191690942036473,0,0,0,0.153606533256243,0,0.182975287204819,0,0.279182999001381,0,0.30559649555362,0,0,0,0.302904773332736,0.0755715601067855,0.289864488701678,0,0,0,0.649776417447669,0,0.561777680527007,0,0.259786004602869,0,0.422530259330042,0,0,0,0.216491041011214,0.253359865475099,0.505524445014783,0.22836775943812,3.6251303710604,0.890652834388949,0.173485326766136,0.608930956624282,0.230615497256059,0,0.587943535678524,0.251333182659351,0.741584903203122,0.289198713839823,5.30766331169925,0.161766849947409,2.42925670306433,2.42437626567611,0,0.292780797011547,0.209446706813455,1.78819938646014,0.239630249011841,0,0,0.748953197024114,0,0,0.347648640384553,0,0.41557608911912,0,0.305518091550949,2.36373244159177,0.252722758433675,0.420883711772948,0.260240885925407,0.229902104433473,0.720248519221397,0.150704817835715,0.272145996605311,0.2562274405697,0.187403449119458,0,0,0.378212160335639,0.175951124163949,0.657587197282725,0.556094498451196,0,0.411564272815887,0.199034266818493,0,0,0,0,0.469052119962192,0,0.23674473558521,0.196764231747404,0.462801338662135,0.697601834251224,0.536546802799238,0.116765342367169,0.16455984991348,0.32833492815819,0.243206428637567,0.438599962275997,0.878200461164203,0.536825675041487,0.420579897128254,0,0.991256348951394,0.528901133327089,0,0,0.128867461322093,0.201683524623343,0.444756087689741,0.190225626112559,0.474529061544512,0,0.502670417600539,0.397912944082302,0.19496408711912,0.898819408654221,0.216138049874694,0.199141273254367,0,0.114248512609729,1.1270773567308,0.407302655690628,0.193952487167626,0.140271639780637,0.316182685621286,0.885660887877613,0.156998727841375,0.246794327843601,0.592905254174298,0,0.393117990226406,0,0,0.482354319504834,0.763877555344259,1.15078454980324,0.972811360650212,0,0,0.744281895337007,0.312037673114561,0.505157755894224,0,0,0.739012760666419,0,0.162964976442026,0.339490171550376,0,0.837531287209079,0.714130922658041,0.195133647857799,0.315270288212382,0.221464689648775,0.478364305972461,0.655453258862952,1.20879487306127,1.01254341007058,0,0,0.491764273019036,0.275936746304732,0.481651769963376,0.234423373184406,0,0.252470927204373,1.26203287766503,0.390438744296638,0.430846795465598,0.716906393857656,0,0,0,0.584511715822624,0,0,0.425820255624806,0.534196811001766,0.162886959353576,0,0,0.485561272309963,0,0.3772101595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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:72774
|HGNC=
|MCL_coexpression_id=4
|TSSclassifier=NA
|UniProt=uniprot:Q3U296
|association_with_transcript=-126bp_to_uc009pui.1,uc009puj.1_5end
|cluster_id=chr9:56996145..56996181,-
|description=CAGE_peak_3_at_Neil1_5end
|id=chr9:56996145..56996181,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0002031,1.15e-12,25;CL:0000838,1.46e-10,12;CL:0000542,1.31e-09,13;CL:0000051,1.31e-09,13;CL:0000988,4.30e-09,32;CL:0002032,4.30e-09,32;CL:0000037,4.30e-09,32;CL:0000837,4.30e-09,32;CL:0000084,6.29e-09,11;CL:0000827,6.29e-09,11;CL:0000791,1.03e-08,9;CL:0000789,1.03e-08,9;CL:0002420,1.03e-08,9;CL:0002419,1.03e-08,9;CL:0000790,1.03e-08,9;CL:0000738,1.42e-08,17;CL:0002087,1.42e-08,17;CL:0000624,2.66e-07,8
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004177!6.04e-09!29;UBERON:0002193!8.10e-08!48;UBERON:0003081!4.58e-07!88;UBERON:0003408!6.63e-07!24
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.51e-24,48;UBERON:0002405,1.51e-24,48;UBERON:0004177,3.98e-22,29;UBERON:0005057,3.98e-22,29;UBERON:0002370,9.38e-21,23;UBERON:0000974,9.38e-21,23;UBERON:0004807,9.38e-21,23;UBERON:0005058,9.38e-21,23;UBERON:0003351,9.38e-21,23;UBERON:0009113,9.38e-21,23;UBERON:0003295,9.38e-21,23;UBERON:0009722,9.38e-21,23;UBERON:0005562,9.38e-21,23;UBERON:0007690,9.38e-21,23;UBERON:0002390,1.20e-20,45;UBERON:0003061,1.20e-20,45;UBERON:0006562,1.09e-19,24;UBERON:0003408,1.09e-19,24;UBERON:0001557,1.09e-19,24;UBERON:0001042,1.09e-19,24;UBERON:0008814,1.09e-19,24;UBERON:0009145,1.09e-19,24;UBERON:0000077,2.29e-17,35;UBERON:0000072,5.65e-17,27;UBERON:0000065,4.57e-12,41;UBERON:0001004,1.17e-11,42;UBERON:0007811,1.42e-11,36;UBERON:0003081,2.40e-11,87;UBERON:0000153,5.72e-09,43;UBERON:0003929,6.66e-07,55
|phase1_expression=0.320297694209588,0.348975407639361,0,0,0.500895729946347,0.33575854382378,0.233612640595526,1.67860320474049,1.68946466582,1.87251621057595,0,0,2.05440875917447,1.13646523144697,1.33243904726265,0.607425802169478,0.699561878128147,2.99689057090326,3.15363197293199,2.97072756258621,0.340173160604279,0.893618560807968,1.30599894569468,1.27993938234725,1.83527424853736,0.57423196411502,0,0.215471232685889,0.190023419456374,0,0.443461021310609,0.635030673459631,1.23012957516914,0,0.288851619751275,0,0.204169356262369,0,0,0,0.588231488031014,0,0,0.377690453926732,0.101376931219515,0.183546752161682,0,1.74420125104357,0,0.194429899074283,0.139986421625363,1.43752564364972,8.89247812106003,2.17608642603403,2.35265659399725,0.257259436035947,0.573066879877513,0.515672092277442,0,0,0,0.338844532069132,0,0,0,0,0.299600110518405,1.53687322128622,0.103689612308478,0.270011876663381,0,0.285650984403804,0.220868540951614,0,0.191690942036473,0,0,0,0.153606533256243,0,0.182975287204819,0,0.279182999001381,0,0.30559649555362,0,0,0,0.302904773332736,0.0755715601067855,0.289864488701678,0,0,0,0.649776417447669,0,0.561777680527007,0,0.259786004602869,0,0.422530259330042,0,0,0,0.216491041011214,0.253359865475099,0.505524445014783,0.22836775943812,3.6251303710604,0.890652834388949,0.173485326766136,0.608930956624282,0.230615497256059,0,0.587943535678524,0.251333182659351,0.741584903203122,0.289198713839823,5.30766331169925,0.161766849947409,2.42925670306433,2.42437626567611,0,0.292780797011547,0.209446706813455,1.78819938646014,0.239630249011841,0,0,0.748953197024114,0,0,0.347648640384553,0,0.41557608911912,0,0.305518091550949,2.36373244159177,0.252722758433675,0.420883711772948,0.260240885925407,0.229902104433473,0.720248519221397,0.150704817835715,0.272145996605311,0.2562274405697,0.187403449119458,0,0,0.378212160335639,0.175951124163949,0.657587197282725,0.556094498451196,0,0.411564272815887,0.199034266818493,0,0,0,0,0.469052119962192,0,0.23674473558521,0.196764231747404,0.462801338662135,0.697601834251224,0.536546802799238,0.116765342367169,0.16455984991348,0.32833492815819,0.243206428637567,0.438599962275997,0.878200461164203,0.536825675041487,0.420579897128254,0,0.991256348951394,0.528901133327089,0,0,0.128867461322093,0.201683524623343,0.444756087689741,0.190225626112559,0.474529061544512,0,0.502670417600539,0.397912944082302,0.19496408711912,0.898819408654221,0.216138049874694,0.199141273254367,0,0.114248512609729,1.1270773567308,0.407302655690628,0.193952487167626,0.140271639780637,0.316182685621286,0.885660887877613,0.156998727841375,0.246794327843601,0.592905254174298,0,0.393117990226406,0,0,0.482354319504834,0.763877555344259,1.15078454980324,0.972811360650212,0,0,0.744281895337007,0.312037673114561,0.505157755894224,0,0,0.739012760666419,0,0.162964976442026,0.339490171550376,0,0.837531287209079,0.714130922658041,0.195133647857799,0.315270288212382,0.221464689648775,0.478364305972461,0.655453258862952,1.20879487306127,1.01254341007058,0,0,0.491764273019036,0.275936746304732,0.481651769963376,0.234423373184406,0,0.252470927204373,1.26203287766503,0.390438744296638,0.430846795465598,0.716906393857656,0,0,0,0.584511715822624,0,0,0.425820255624806,0.534196811001766,0.162886959353576,0,0,0.485561272309963,0,0.377210159511796,1.18120757152309,0.614870295887855,0.258428293168221,0,1.42598951353889,0.632073515871632,0,0,0,0.18006109403131,0.258717367565509,0,0.177340233642274,0.178368817602071,0.164549020602121,0,0.23467170806371,0.847328283455281,0.441056796109924,0,0.322928853391811,0.241251699712623,0.358117032009409,0,0,1.29797711407357,3.41741761595705,0.412773735926445,0.740778109478847,0.941842285023455,1.50363650493128,2.51655990527175,0.339956859987711,0.419854356970974,1.10559979043539,0,0.316335993581135,0.203319467126849,0.216010681643603,0.209088296014469,0.218362563746178,0,0.41326727862668,0.26175594198403,0.129614973291793,0.621339313086926,0,0.598066184175915,0.165458490457098,0.194451188344048,0.129159823477731,0.337912250981556,0.352071715937262,0.39061315453185,0.419437377702843,0.241584120826006,0,8.84831137758899,0.608175645870493,1.23253148597793,1.16928740680016,5.19177417435696,5.36439657909415,5.64918612743854,6.4983391956814,6.76475214652589,10.897573351665,8.36857336635776,7.50425681696094,8.46664206434899,13.2070899465173,0,0,0,0.167884616364078,0,0.187682475451182,0,0.214368379079066,0,0,0,0.572895513439397,0.171853182343688,0,0,0,0.45032120322422,0,0,0.207574695168353,0,0.682934423016537,0.486213434136588,0.209613162627982,0.367687016900028,0.888986911206461,0.206035057238894,0.64183841918363,0,0.25347929989024,0.188626341386076,0.468207537349412,0.512201219238954,0.287177344778066,0.476293691283074,0.347652977834566,0,0,0.735994600671987,0.342869252385415,0.354951612318675,0.953744759789284,0.145346416632329,0.376437521661322,0.338458431566706,0.73171189149109,0.526139422875686,0.407412341537585,1.12228454331548,0.355905054372522,0.197008964751127,0.409231043169689,0.154936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|short_description=p3@Neil1
}}

Revision as of 08:55, 5 August 2015

Short description:p3@Neil1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Neil1_5end
Coexpression cluster:MCL_coexpression_mm9:4
Association with transcript: -126bp_to_uc009pui.1, uc009puj.1_5end
EntrezGene:72774
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Neil1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.68
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.69
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.87
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E42.05
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.14
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.61
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A23.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A43.15
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.97
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.34
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.89
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.31
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.28
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.84
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.74
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A28.89
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.18
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.35
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E81.54
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.18
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.31
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.30
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H93.63
adrenal gland, adult.CNhs10508.49-24D70.89
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.59
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G25.31
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A62.43
bone (os femoris), neonate N20.CNhs11195.1350-25C32.42
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H71.79
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.75
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.35
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.42
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.36
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.27
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.19
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.24
heart, neonate N20.CNhs11127.821-26I60.44
heart, neonate N25.CNhs11196.1351-25D30.88
heart, neonate N30.CNhs11202.1390-42D20.54
hippocampus, adult.CNhs10478.13-16E80.42
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I30.99
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.32
kidney, neonate N20.CNhs11113.832-19I10.89
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A30.76
liver, embryo E18.CNhs10579.499-43G41.15
liver, neonate N00.CNhs11117.641-24F40.97
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.74
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.84
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.66
lung, neonate N25.CNhs11119.1359-25C71.21
lung, neonate N30.CNhs11133.1394-42H21.01
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.48
medulla oblongata, neonate N30.CNhs11200.1396-42A30.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G31.18
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D81.43
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.85
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.24
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C91.30
spleen, adult.CNhs10465.25-2G23.42
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.74
spleen, neonate N10.CNhs11116.752-24D10.94
spleen, neonate N20.CNhs11112.824-19H11.50
spleen, neonate N25.CNhs11099.1354-25G32.52
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.42
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.11
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.41
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.60
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D90.42
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B58.85
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I21.23
thymus, embryo E16.CNhs11002.456-26C51.17
thymus, embryo E17.CNhs10581.478-18C15.19
thymus, embryo E18.CNhs10595.1273-19G45.36
thymus, neonate N02.CNhs11181.1541-43F85.65
thymus, neonate N03.CNhs11137.2104-43C76.50
thymus, neonate N06.CNhs11197.681-26C46.76
thymus, neonate N07.CNhs11211.713-19D310.90
thymus, neonate N10.CNhs11194.748-24E48.37
thymus, neonate N20.CNhs11186.820-7A27.50
thymus, neonate N25.CNhs11125.1362-25G78.47
thymus, neonate N30.CNhs11132.1393-42G213.21
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B41.16





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
hemolymphoid system1.51e-2448
immune system1.51e-2448
hemopoietic organ3.98e-2229
immune organ3.98e-2229
thymus9.38e-2123
neck9.38e-2123
respiratory system epithelium9.38e-2123
hemolymphoid system gland9.38e-2123
pharyngeal epithelium9.38e-2123
thymic region9.38e-2123
pharyngeal gland9.38e-2123
entire pharyngeal arch endoderm9.38e-2123
thymus primordium9.38e-2123
early pharyngeal endoderm9.38e-2123
hematopoietic system1.20e-2045
blood island1.20e-2045
pharynx1.09e-1924
gland of gut1.09e-1924
upper respiratory tract1.09e-1924
chordate pharynx1.09e-1924
pharyngeal arch system1.09e-1924
pharyngeal region of foregut1.09e-1924
mixed endoderm/mesoderm-derived structure2.29e-1735
segment of respiratory tract5.65e-1727
respiratory tract4.57e-1241
respiratory system1.17e-1142
craniocervical region1.42e-1136
lateral plate mesoderm2.40e-1187
anterior region of body5.72e-0943
gut epithelium6.66e-0755
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