FFCP PHASE2:Hg19::chr17:39280430..39280436,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:83755 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:16776 |TSScla...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=83755 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=16776 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q9BQ66 | ||
|association_with_transcript=-11bp_to_ENST00000394014,NM_031854,uc002hwa.2_5end | |association_with_transcript=-11bp_to_ENST00000394014,NM_031854,uc002hwa.2_5end | ||
|cluster_id=chr17:39280430..39280436,- | |cluster_id=chr17:39280430..39280436,- |
Latest revision as of 04:34, 20 September 2015
Short description: | p1@KRTAP4-12 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KRTAP4-12_5end |
Coexpression cluster: | C208_skin_amniotic_papillotubular_salivary_umbilical_Alveolar_serous |
Association with transcript: | -11bp_to_ENST00000394014, NM_031854, uc002hwa.2_5end |
EntrezGene: | KRTAP4-12 |
HGNC: | 16776 |
UniProt: | Q9BQ66 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@KRTAP4-12 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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skin fibroblast | 1.87e-15 | 23 |
preadipocyte | 4.47e-14 | 12 |
fibroblast | 1.18e-12 | 76 |
aortic smooth muscle cell | 4.86e-12 | 10 |
visceral preadipocyte | 1.39e-07 | 3 |
Showing 1 to 5 of 5 entries
Ontology term | p-value | n |
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integument | 7.41e-13 | 46 |
integumental system | 7.41e-13 | 46 |
skin of body | 3.06e-12 | 41 |
blood vessel smooth muscle | 4.86e-12 | 10 |
arterial system smooth muscle | 4.86e-12 | 10 |
artery smooth muscle tissue | 4.86e-12 | 10 |
aorta smooth muscle tissue | 4.86e-12 | 10 |
smooth muscle tissue | 6.22e-08 | 15 |
Showing 1 to 8 of 8 entries
Ontology term | p-value | n |
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cell type benign neoplasm | 3.64e-16 | 3 |
leiomyoma | 3.64e-16 | 3 |
benign neoplasm | 3.04e-12 | 4 |
musculoskeletal system disease | 2.38e-09 | 5 |
myotonic disease | 2.38e-09 | 5 |
muscle tissue disease | 2.38e-09 | 5 |
myopathy | 2.38e-09 | 5 |
muscular disease | 2.38e-09 | 5 |
myotonic dystrophy | 2.38e-09 | 5 |
Showing 1 to 9 of 9 entries