FFCP PHASE2:Hg19::chr9:8501305..8501323,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:5789 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:9668 |TSSclass...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=5789 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=9668 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
Latest revision as of 23:49, 17 September 2015
| Short description: | p19@PTPRD |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_19_at_PTPRD_5end |
| Coexpression cluster: | C3205_optic_occipital_parietal_middle_hippocampus_amygdala_temporal |
| Association with transcript: | -246bp_to_ENST00000471274_5end |
| EntrezGene: | PTPRD |
| HGNC: | 9668 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p19@PTPRD |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| neural tube | 2.09e-47 | 56 |
| neural rod | 2.09e-47 | 56 |
| future spinal cord | 2.09e-47 | 56 |
| neural keel | 2.09e-47 | 56 |
| regional part of nervous system | 6.10e-44 | 53 |
| regional part of brain | 6.10e-44 | 53 |
| brain grey matter | 6.73e-44 | 34 |
| gray matter | 6.73e-44 | 34 |
| neural plate | 2.32e-36 | 82 |
| presumptive neural plate | 2.32e-36 | 82 |
Showing 1 to 10 of 77 entries
