FFCP PHASE2:Mm9::chr17:34257323..34257367,-: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
(Created page with "{{FFCP |DHSsupport=NA |DPIdataset=NA |EntrezGene=entrezgene:14312 |HGNC= |TSSclassifier=NA |UniProt=uniprot:F8WIU6,uniprot:Q3TH63,uniprot:Q7JJ13 |association_with_transcript=0...") |
No edit summary |
||
Line 2: | Line 2: | ||
|DHSsupport=NA | |DHSsupport=NA | ||
|DPIdataset=NA | |DPIdataset=NA | ||
|EntrezGene= | |EntrezGene=14312 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |TSSclassifier=NA | ||
|UniProt= | |UniProt=F8WIU6,Q3TH63,Q7JJ13 | ||
|association_with_transcript=0bp_to_ENSMUST00000114241,ENSMUST00000154232,uc008cbh.1,uc008cbk.1_5end | |association_with_transcript=0bp_to_ENSMUST00000114241,ENSMUST00000154232,uc008cbh.1,uc008cbk.1_5end | ||
|cluster_id=chr17:34257323..34257367,- | |cluster_id=chr17:34257323..34257367,- |
Latest revision as of 07:31, 26 September 2015
Short description: | p2@Brd2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Brd2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000114241, ENSMUST00000154232, uc008cbh.1, uc008cbk.1_5end |
EntrezGene: | Brd2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p2@Brd2 |
---|
0
5
10
15
20
25
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 2.30e-09 | 43 |
ectodermal cell | 2.66e-09 | 44 |
neurectodermal cell | 2.66e-09 | 44 |
neuron | 3.96e-08 | 33 |
neuronal stem cell | 3.96e-08 | 33 |
neuroblast | 3.96e-08 | 33 |
electrically signaling cell | 3.96e-08 | 33 |
CNS neuron (sensu Vertebrata) | 1.60e-07 | 23 |
neuroblast (sensu Vertebrata) | 1.60e-07 | 23 |
Showing 1 to 9 of 9 entries
Ontology term | p-value | n |
---|---|---|
central nervous system | 3.00e-20 | 73 |
ectoderm-derived structure | 1.20e-19 | 95 |
ectoderm | 1.20e-19 | 95 |
presumptive ectoderm | 1.20e-19 | 95 |
nervous system | 5.94e-19 | 75 |
regional part of nervous system | 8.50e-16 | 54 |
neurectoderm | 7.29e-15 | 64 |
neural plate | 7.29e-15 | 64 |
presumptive neural plate | 7.29e-15 | 64 |
neural tube | 8.76e-15 | 52 |
Showing 1 to 10 of 28 entries