FFCP PHASE1:Mm9::chr10:19311485..19311498,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr10:19311485..19311498,- | |id=chr10:19311485..19311498,- | ||
|ontology_enrichment_celltype=CL:0000063!2.90e-10!66;CL:0002563!1.51e-09!9;CL:0002251!1.51e-09!9;CL:0000239!6.10e-07!6;CL:0000677!6.10e-07!6;CL:0000212!6.10e-07!6;CL:0000584!6.10e-07!6 | |ontology_enrichment_celltype=CL:0000063!2.90e-10!66;CL:0002563!1.51e-09!9;CL:0002251!1.51e-09!9;CL:0000239!6.10e-07!6;CL:0000677!6.10e-07!6;CL:0000212!6.10e-07!6;CL:0000584!6.10e-07!6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.20e-20,9;CL:0002251,1.20e-20,9;CL:0000066,2.14e-17,25;CL:0000239,1.98e-14,6;CL:0000677,1.98e-14,6;CL:0000584,1.98e-14,6;CL:0000223,5.83e-14,20;CL:0002076,7.28e-14,15;CL:0000075,3.10e-12,7;CL:0000682,8.24e-08,3;CL:0002250,8.67e-08,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!4.58e-12!15;UBERON:0001242!5.06e-11!13;UBERON:0000060!5.06e-11!13;UBERON:0001262!5.06e-11!13;UBERON:0004786!5.06e-11!13;UBERON:0002193!2.20e-10!48;UBERON:0002390!6.91e-10!45;UBERON:0003061!6.91e-10!45;UBERON:0000490!1.11e-09!66;UBERON:0003350!1.51e-09!9;UBERON:0004808!1.51e-09!9;UBERON:0001277!1.51e-09!9;UBERON:0004923!1.96e-09!24;UBERON:0004177!7.07e-09!29;UBERON:0003929!1.37e-08!55;UBERON:0002370!3.12e-08!23;UBERON:0000974!3.12e-08!23;UBERON:0004807!3.12e-08!23;UBERON:0005058!3.12e-08!23;UBERON:0003351!3.12e-08!23;UBERON:0009113!3.12e-08!23;UBERON:0003295!3.12e-08!23;UBERON:0009722!3.12e-08!23;UBERON:0005562!3.12e-08!23;UBERON:0007690!3.12e-08!23;UBERON:0006562!1.28e-07!24;UBERON:0003408!1.28e-07!24;UBERON:0001557!1.28e-07!24;UBERON:0001042!1.28e-07!24;UBERON:0008814!1.28e-07!24;UBERON:0009145!1.28e-07!24;UBERON:0005911!3.26e-07!69;UBERON:0000485!3.96e-07!11;UBERON:0000072!4.71e-07!27 | |ontology_enrichment_uberon=UBERON:0000344!4.58e-12!15;UBERON:0001242!5.06e-11!13;UBERON:0000060!5.06e-11!13;UBERON:0001262!5.06e-11!13;UBERON:0004786!5.06e-11!13;UBERON:0002193!2.20e-10!48;UBERON:0002390!6.91e-10!45;UBERON:0003061!6.91e-10!45;UBERON:0000490!1.11e-09!66;UBERON:0003350!1.51e-09!9;UBERON:0004808!1.51e-09!9;UBERON:0001277!1.51e-09!9;UBERON:0004923!1.96e-09!24;UBERON:0004177!7.07e-09!29;UBERON:0003929!1.37e-08!55;UBERON:0002370!3.12e-08!23;UBERON:0000974!3.12e-08!23;UBERON:0004807!3.12e-08!23;UBERON:0005058!3.12e-08!23;UBERON:0003351!3.12e-08!23;UBERON:0009113!3.12e-08!23;UBERON:0003295!3.12e-08!23;UBERON:0009722!3.12e-08!23;UBERON:0005562!3.12e-08!23;UBERON:0007690!3.12e-08!23;UBERON:0006562!1.28e-07!24;UBERON:0003408!1.28e-07!24;UBERON:0001557!1.28e-07!24;UBERON:0001042!1.28e-07!24;UBERON:0008814!1.28e-07!24;UBERON:0009145!1.28e-07!24;UBERON:0005911!3.26e-07!69;UBERON:0000485!3.96e-07!11;UBERON:0000072!4.71e-07!27 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,1.20e-20,9;UBERON:0004808,1.20e-20,9;UBERON:0001277,1.20e-20,9;UBERON:0000485,1.61e-16,11;UBERON:0001242,1.61e-16,13;UBERON:0001262,1.61e-16,13;UBERON:0004786,1.61e-16,13;UBERON:0003929,1.37e-14,55;UBERON:0000344,5.28e-14,15;UBERON:0000490,9.40e-14,66;UBERON:0005911,1.69e-10,69;UBERON:0002370,3.10e-09,23;UBERON:0000974,3.10e-09,23;UBERON:0004807,3.10e-09,23;UBERON:0005058,3.10e-09,23;UBERON:0003351,3.10e-09,23;UBERON:0009113,3.10e-09,23;UBERON:0003295,3.10e-09,23;UBERON:0009722,3.10e-09,23;UBERON:0005562,3.10e-09,23;UBERON:0007690,3.10e-09,23;UBERON:0000072,7.25e-09,27;UBERON:0006562,9.45e-09,24;UBERON:0003408,9.45e-09,24;UBERON:0001557,9.45e-09,24;UBERON:0001042,9.45e-09,24;UBERON:0008814,9.45e-09,24;UBERON:0009145,9.45e-09,24;UBERON:0000160,4.65e-08,31;UBERON:0004923,6.67e-08,24;UBERON:0004177,7.69e-07,29;UBERON:0005057,7.69e-07,29;UBERON:0004921,8.14e-07,114 | |||
|phase1_expression=0,20.2405736430829,17.7449703361919,22.3823516367054,21.0376206577466,13.4303417529512,6.54115393667472,3.48632973292256,0,0.234064526321993,0,0.0797721589953364,0.513602189793617,2.27293046289393,0.333109761815663,0.202475267389826,0,0.630924330716475,0.137114433605739,0,0,0.496454756004426,1.04479915655574,0.799962113967033,0.68822784320151,15.5042630311055,8.61523992318149,8.61884930743556,0.190023419456374,0.504060259519861,1.55211357458713,0.635030673459631,1.23012957516914,0,19.6419101430867,3.49092755252834,21.4377824075488,2.09265815368454,2.3440060335714,0.523523743973798,2.35292595212406,2.04913645487534,0.485510353031154,0.125896817975577,0.405507724878058,0.367093504323363,0,0,0,0.388859798148567,0,0,0.671130424230945,1.45072428402269,4.03312558970957,0,0.286533439938757,0,0,0,0,0,0,0,0.988866362566974,1.4209602298922,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0.153606533256243,0,0.0914876436024097,0,0.279182999001381,0,0.15279824777681,0,0,0,0,0,2.89864488701678,0,1.3599426674155,0,0,0,0.280888840263504,0,0,0.35333957451034,0,0,0,0,0,0,1.01104889002957,0.22836775943812,0,0,0,0,0,0,0,0.125666591329675,0,0.144599356919912,1.76922110389975,0,0.220841518460394,0.484875253135222,0,0,0,0.510914110417183,0.599075622529601,1.79970819298022,0.127070227073065,0,0,0,0,0,0.20778804455956,0,0,0,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0.175951124163949,0,0,0,0,0.199034266818493,0,1.28673953557358,1.13665399758237,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0.660837565967596,2.90895623329899,0,0.232236671860439,0,0,0,0,0.949058123089023,0,0,0,0,0,1.08069024937347,0.398282546508734,0,0,0,0,0,0,0.0632365371242573,0,0.156998727841375,0,0,0,0,0,0.202860121388503,0.241177159752417,0.25462585178142,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0.238043640886014,0.195133647857799,0,0,0,0.491589944147214,0,0.578596234326046,0,0.54390568381871,0,0,0,0,0.163934945376675,0.252470927204373,0,0,0,0,0,0.283076530788832,0,0,0,0,0,0.178065603667255,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,1.03135543248187,0,0,0,0,0,0,0.164549020602121,0,0,0,0.441056796109924,0,0,0.0603129249281559,0,0.164140899745061,0.582961673259701,0,0.170870880797853,0.412773735926445,0.185194527369712,0,0.136694227721025,0.457556346413045,0.509935289981566,0.839708713941948,0.552799895217695,0,0,0,0,0,0,0,0,0,0.777689839750757,0,0,0,0,0,0,0,0,0,0,0,0,0.948033361884535,0.810900861160657,0.718976700153791,0.389762468933385,4.11761400035207,4.37098980518783,4.08664528367894,3.69223817936443,4.2405908978222,4.11516755936999,3.2264379243789,2.53390489923356,2.5977197242889,3.85693777199178,0,0,0.0897138566094757,0,0,0,0,0.428736758158132,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0,0,0,0.320919209591815,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0.192909220463705,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0.644613162144895,0,0,0.463735671240843 | |phase1_expression=0,20.2405736430829,17.7449703361919,22.3823516367054,21.0376206577466,13.4303417529512,6.54115393667472,3.48632973292256,0,0.234064526321993,0,0.0797721589953364,0.513602189793617,2.27293046289393,0.333109761815663,0.202475267389826,0,0.630924330716475,0.137114433605739,0,0,0.496454756004426,1.04479915655574,0.799962113967033,0.68822784320151,15.5042630311055,8.61523992318149,8.61884930743556,0.190023419456374,0.504060259519861,1.55211357458713,0.635030673459631,1.23012957516914,0,19.6419101430867,3.49092755252834,21.4377824075488,2.09265815368454,2.3440060335714,0.523523743973798,2.35292595212406,2.04913645487534,0.485510353031154,0.125896817975577,0.405507724878058,0.367093504323363,0,0,0,0.388859798148567,0,0,0.671130424230945,1.45072428402269,4.03312558970957,0,0.286533439938757,0,0,0,0,0,0,0,0.988866362566974,1.4209602298922,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0.153606533256243,0,0.0914876436024097,0,0.279182999001381,0,0.15279824777681,0,0,0,0,0,2.89864488701678,0,1.3599426674155,0,0,0,0.280888840263504,0,0,0.35333957451034,0,0,0,0,0,0,1.01104889002957,0.22836775943812,0,0,0,0,0,0,0,0.125666591329675,0,0.144599356919912,1.76922110389975,0,0.220841518460394,0.484875253135222,0,0,0,0.510914110417183,0.599075622529601,1.79970819298022,0.127070227073065,0,0,0,0,0,0.20778804455956,0,0,0,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0.175951124163949,0,0,0,0,0.199034266818493,0,1.28673953557358,1.13665399758237,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0.660837565967596,2.90895623329899,0,0.232236671860439,0,0,0,0,0.949058123089023,0,0,0,0,0,1.08069024937347,0.398282546508734,0,0,0,0,0,0,0.0632365371242573,0,0.156998727841375,0,0,0,0,0,0.202860121388503,0.241177159752417,0.25462585178142,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0.238043640886014,0.195133647857799,0,0,0,0.491589944147214,0,0.578596234326046,0,0.54390568381871,0,0,0,0,0.163934945376675,0.252470927204373,0,0,0,0,0,0.283076530788832,0,0,0,0,0,0.178065603667255,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,1.03135543248187,0,0,0,0,0,0,0.164549020602121,0,0,0,0.441056796109924,0,0,0.0603129249281559,0,0.164140899745061,0.582961673259701,0,0.170870880797853,0.412773735926445,0.185194527369712,0,0.136694227721025,0.457556346413045,0.509935289981566,0.839708713941948,0.552799895217695,0,0,0,0,0,0,0,0,0,0.777689839750757,0,0,0,0,0,0,0,0,0,0,0,0,0.948033361884535,0.810900861160657,0.718976700153791,0.389762468933385,4.11761400035207,4.37098980518783,4.08664528367894,3.69223817936443,4.2405908978222,4.11516755936999,3.2264379243789,2.53390489923356,2.5977197242889,3.85693777199178,0,0,0.0897138566094757,0,0,0,0,0.428736758158132,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0,0,0,0.320919209591815,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0.192909220463705,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0.644613162144895,0,0,0.463735671240843 | ||
|short_description=p@chr10:19311485..19311498,- | |short_description=p@chr10:19311485..19311498,- | ||
}} | }} |
Revision as of 00:47, 14 November 2012
Short description: | p@chr10:19311485..19311498, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:19311485..19311498, - |
Coexpression cluster: | MCL_coexpression_mm9:232 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.20e-20 | 9 |
epithelial cell of alimentary canal | 1.20e-20 | 9 |
epithelial cell | 2.14e-17 | 25 |
brush border epithelial cell | 1.98e-14 | 6 |
gut absorptive cell | 1.98e-14 | 6 |
enterocyte | 1.98e-14 | 6 |
endodermal cell | 5.83e-14 | 20 |
endo-epithelial cell | 7.28e-14 | 15 |
columnar/cuboidal epithelial cell | 3.10e-12 | 7 |
M cell of gut | 8.24e-08 | 3 |
intestinal crypt stem cell | 8.67e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 1.20e-20 | 9 |
gastrointestinal system epithelium | 1.20e-20 | 9 |
intestinal epithelium | 1.20e-20 | 9 |
simple columnar epithelium | 1.61e-16 | 11 |
intestinal mucosa | 1.61e-16 | 13 |
wall of intestine | 1.61e-16 | 13 |
gastrointestinal system mucosa | 1.61e-16 | 13 |
gut epithelium | 1.37e-14 | 55 |
mucosa | 5.28e-14 | 15 |
unilaminar epithelium | 9.40e-14 | 66 |
endo-epithelium | 1.69e-10 | 69 |
thymus | 3.10e-09 | 23 |
neck | 3.10e-09 | 23 |
respiratory system epithelium | 3.10e-09 | 23 |
hemolymphoid system gland | 3.10e-09 | 23 |
pharyngeal epithelium | 3.10e-09 | 23 |
thymic region | 3.10e-09 | 23 |
pharyngeal gland | 3.10e-09 | 23 |
entire pharyngeal arch endoderm | 3.10e-09 | 23 |
thymus primordium | 3.10e-09 | 23 |
early pharyngeal endoderm | 3.10e-09 | 23 |
segment of respiratory tract | 7.25e-09 | 27 |
pharynx | 9.45e-09 | 24 |
gland of gut | 9.45e-09 | 24 |
upper respiratory tract | 9.45e-09 | 24 |
chordate pharynx | 9.45e-09 | 24 |
pharyngeal arch system | 9.45e-09 | 24 |
pharyngeal region of foregut | 9.45e-09 | 24 |
intestine | 4.65e-08 | 31 |
organ component layer | 6.67e-08 | 24 |
hemopoietic organ | 7.69e-07 | 29 |
immune organ | 7.69e-07 | 29 |
subdivision of digestive tract | 8.14e-07 | 114 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.