FFCP PHASE1:Hg19::chr1:111182849..111182891,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0002057!7.58e-73!42;CL:0002194!1.46e-69!63;CL:0000576!1.46e-69!63;CL:0000040!1.46e-69!63;CL:0000559!1.46e-69!63;CL:0000766!7.78e-68!76;CL:0000860!2.61e-67!45;CL:0002009!4.33e-67!65;CL:0000839!1.47e-64!70;CL:0000557!1.71e-63!71;CL:0000763!2.82e-44!112;CL:0000049!2.82e-44!112;CL:0002087!2.61e-33!119;CL:0000738!6.37e-33!140;CL:0002031!1.86e-31!124;CL:0002032!4.49e-26!165;CL:0000837!4.49e-26!165;CL:0000037!7.78e-26!172;CL:0000566!7.78e-26!172;CL:0000988!4.85e-25!182;CL:0000134!5.64e-13!358;CL:0000219!1.18e-12!390;CL:0002320!1.87e-12!365;CL:0000767!9.19e-09!3;CL:0000048!1.80e-08!430;CL:0000034!2.41e-08!444;CL:0000723!3.62e-08!436 | |ontology_enrichment_celltype=CL:0002057!7.58e-73!42;CL:0002194!1.46e-69!63;CL:0000576!1.46e-69!63;CL:0000040!1.46e-69!63;CL:0000559!1.46e-69!63;CL:0000766!7.78e-68!76;CL:0000860!2.61e-67!45;CL:0002009!4.33e-67!65;CL:0000839!1.47e-64!70;CL:0000557!1.71e-63!71;CL:0000763!2.82e-44!112;CL:0000049!2.82e-44!112;CL:0002087!2.61e-33!119;CL:0000738!6.37e-33!140;CL:0002031!1.86e-31!124;CL:0002032!4.49e-26!165;CL:0000837!4.49e-26!165;CL:0000037!7.78e-26!172;CL:0000566!7.78e-26!172;CL:0000988!4.85e-25!182;CL:0000134!5.64e-13!358;CL:0000219!1.18e-12!390;CL:0002320!1.87e-12!365;CL:0000767!9.19e-09!3;CL:0000048!1.80e-08!430;CL:0000034!2.41e-08!444;CL:0000723!3.62e-08!436 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.22e-128;33!CL:0002057;2.22e-128;33!CL:0000473;1.39e-116;39!CL:0000234;1.39e-116;39!CL:0000576;2.07e-71;48!CL:0000766;1.98e-50;69!CL:0000763;7.55e-24;100!CL:0002087;3.45e-17;104!CL:0000235;1.20e-13;6!CL:0000738;5.37e-13;136!CL:0002393;4.11e-08;6!CL:0002397;4.11e-08;6!CL:0000988;7.72e-07;177 | |ontology_enrichment_celltype_v019=CL:0000860;2.22e-128;33!CL:0002057;2.22e-128;33!CL:0000473;1.39e-116;39!CL:0000234;1.39e-116;39!CL:0000576;2.07e-71;48!CL:0000766;1.98e-50;69!CL:0000763;7.55e-24;100!CL:0002087;3.45e-17;104!CL:0000235;1.20e-13;6!CL:0000738;5.37e-13;136!CL:0002393;4.11e-08;6!CL:0002397;4.11e-08;6!CL:0000988;7.72e-07;177 | ||
|ontology_enrichment_celltype_v019_2=CL:0000473,2.76e-145,48;CL:0000234,2.76e-145,48;CL:0000860,1.08e-132,42;CL:0002057,1.08e-132,42;CL:0002194,5.78e-115,59;CL:0000576,5.78e-115,59;CL:0000040,5.78e-115,59;CL:0000559,5.78e-115,59;CL:0002009,4.74e-111,61;CL:0000839,2.74e-102,66;CL:0000557,1.09e-100,67;CL:0000766,1.25e-98,72;CL:0000763,6.32e-64,108;CL:0000049,6.32e-64,108;CL:0002087,2.36e-56,115;CL:0002031,9.35e-54,120;CL:0000738,1.59e-49,136;CL:0002032,7.25e-41,161;CL:0000837,7.25e-41,161;CL:0000037,6.72e-39,168;CL:0000988,1.35e-36,177;CL:0000134,5.81e-15,354;CL:0002320,1.54e-14,361;CL:0000235,1.18e-13,6;CL:0000219,4.79e-13,386;CL:0000048,3.23e-11,427;CL:0000723,5.78e-11,433;CL:0000034,1.22e-10,441 | |||
|ontology_enrichment_development_v019=CL:0002057;9.32e-98;42!CL:0000049;6.92e-19;108 | |ontology_enrichment_development_v019=CL:0002057;9.32e-98;42!CL:0000049;6.92e-19;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.39e-55!80;UBERON:0001474!4.45e-53!86;UBERON:0002390!2.95e-47!102;UBERON:0003061!2.95e-47!102;UBERON:0002193!6.34e-44!112;UBERON:0004765!1.84e-43!101;UBERON:0001434!1.84e-43!101;UBERON:0002405!2.23e-40!115;UBERON:0002204!1.19e-21!167;UBERON:0003081!4.96e-20!216;UBERON:0002384!1.95e-12!375;UBERON:0000062!4.06e-07!511;UBERON:0000926!5.13e-07!448;UBERON:0004120!5.13e-07!448;UBERON:0006603!5.13e-07!448 | |ontology_enrichment_uberon=UBERON:0002371!4.39e-55!80;UBERON:0001474!4.45e-53!86;UBERON:0002390!2.95e-47!102;UBERON:0003061!2.95e-47!102;UBERON:0002193!6.34e-44!112;UBERON:0004765!1.84e-43!101;UBERON:0001434!1.84e-43!101;UBERON:0002405!2.23e-40!115;UBERON:0002204!1.19e-21!167;UBERON:0003081!4.96e-20!216;UBERON:0002384!1.95e-12!375;UBERON:0000062!4.06e-07!511;UBERON:0000926!5.13e-07!448;UBERON:0004120!5.13e-07!448;UBERON:0006603!5.13e-07!448 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.57e-88,76;UBERON:0001474,2.46e-81,82;UBERON:0004765,1.28e-73,90;UBERON:0002405,4.61e-71,93;UBERON:0002390,3.79e-67,98;UBERON:0003061,3.79e-67,98;UBERON:0001434,1.09e-65,100;UBERON:0002193,2.16e-60,108;UBERON:0002204,7.11e-37,167;UBERON:0003081,3.44e-29,203;UBERON:0000926,1.95e-16,315;UBERON:0004120,1.95e-16,315;UBERON:0006603,1.95e-16,315;UBERON:0002384,5.82e-14,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,1.96682138424452,0.383829398097213,0.77408061658038,0,0,0,0,0,0,3.32397245119126,1.20326668482085,2.60413044859022,0,0,0,12.2134520574834,9.44689859222024,10.1885305698883,15.3403164357752,13.1573724166984,7.74265927237759,9.49384894663097,6.40401766322752,10.4052181150977,16.8925383560943,6.45484683583826,1.35426486594342,10.3533286748433,10.643339852256,11.2361742222542,14.0798590490615,17.009238435033,15.983428144976,6.59702600373432,5.98390972864896,4.26224750532694,39.758665692116,41.4191214024532,32.3867569477699,8.03995728821578,7.82224377630302,5.2125322729228,28.4537766237683,39.773984686657,32.5956259064111,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348259474598534,0.531831842075461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.70838706696137,1.63802985597466,5.35072184239422,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0.502257091432126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173767228936166,0,0,0,0,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341826167541004,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889563386041866,0,0,0,0,0,0,0,0,0,0,0,0,0.300646838828985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0.209205692624666,0,0,0,0,0,0,0,0.558564802544508,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0.492555124496034,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0.122026264901963,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0.265841714557995,0,0.150257608997218,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0.690359926060101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,1.96682138424452,0.383829398097213,0.77408061658038,0,0,0,0,0,0,3.32397245119126,1.20326668482085,2.60413044859022,0,0,0,12.2134520574834,9.44689859222024,10.1885305698883,15.3403164357752,13.1573724166984,7.74265927237759,9.49384894663097,6.40401766322752,10.4052181150977,16.8925383560943,6.45484683583826,1.35426486594342,10.3533286748433,10.643339852256,11.2361742222542,14.0798590490615,17.009238435033,15.983428144976,6.59702600373432,5.98390972864896,4.26224750532694,39.758665692116,41.4191214024532,32.3867569477699,8.03995728821578,7.82224377630302,5.2125322729228,28.4537766237683,39.773984686657,32.5956259064111,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348259474598534,0.531831842075461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.70838706696137,1.63802985597466,5.35072184239422,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0.502257091432126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173767228936166,0,0,0,0,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341826167541004,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889563386041866,0,0,0,0,0,0,0,0,0,0,0,0,0.300646838828985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0.209205692624666,0,0,0,0,0,0,0,0.558564802544508,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0.492555124496034,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0.122026264901963,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0.265841714557995,0,0.150257608997218,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0.690359926060101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr1:111182849..111182891,+ | |short_description=p@chr1:111182849..111182891,+ | ||
}} | }} | ||
Revision as of 21:52, 15 November 2012
| Short description: | p@chr1:111182849..111182891, + |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_at_chr1:111182849..111182891, + |
| Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
| Association with transcript: | NA |
| EntrezGene: | NA |
| HGNC: | NA |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| defensive cell | 2.76e-145 | 48 |
| phagocyte | 2.76e-145 | 48 |
| classical monocyte | 1.08e-132 | 42 |
| CD14-positive, CD16-negative classical monocyte | 1.08e-132 | 42 |
| monopoietic cell | 5.78e-115 | 59 |
| monocyte | 5.78e-115 | 59 |
| monoblast | 5.78e-115 | 59 |
| promonocyte | 5.78e-115 | 59 |
| macrophage dendritic cell progenitor | 4.74e-111 | 61 |
| myeloid lineage restricted progenitor cell | 2.74e-102 | 66 |
| granulocyte monocyte progenitor cell | 1.09e-100 | 67 |
| myeloid leukocyte | 1.25e-98 | 72 |
| myeloid cell | 6.32e-64 | 108 |
| common myeloid progenitor | 6.32e-64 | 108 |
| nongranular leukocyte | 2.36e-56 | 115 |
| hematopoietic lineage restricted progenitor cell | 9.35e-54 | 120 |
| leukocyte | 1.59e-49 | 136 |
| hematopoietic oligopotent progenitor cell | 7.25e-41 | 161 |
| hematopoietic multipotent progenitor cell | 7.25e-41 | 161 |
| hematopoietic stem cell | 6.72e-39 | 168 |
| hematopoietic cell | 1.35e-36 | 177 |
| mesenchymal cell | 5.81e-15 | 354 |
| connective tissue cell | 1.54e-14 | 361 |
| macrophage | 1.18e-13 | 6 |
| motile cell | 4.79e-13 | 386 |
| multi fate stem cell | 3.23e-11 | 427 |
| somatic stem cell | 5.78e-11 | 433 |
| stem cell | 1.22e-10 | 441 |
| Ontology term | p-value | n |
|---|---|---|
| bone marrow | 3.57e-88 | 76 |
| bone element | 2.46e-81 | 82 |
| skeletal element | 1.28e-73 | 90 |
| immune system | 4.61e-71 | 93 |
| hematopoietic system | 3.79e-67 | 98 |
| blood island | 3.79e-67 | 98 |
| skeletal system | 1.09e-65 | 100 |
| hemolymphoid system | 2.16e-60 | 108 |
| musculoskeletal system | 7.11e-37 | 167 |
| lateral plate mesoderm | 3.44e-29 | 203 |
| mesoderm | 1.95e-16 | 315 |
| mesoderm-derived structure | 1.95e-16 | 315 |
| presumptive mesoderm | 1.95e-16 | 315 |
| connective tissue | 5.82e-14 | 371 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
