FFCP PHASE1:Hg19::chr7:14028693..14028704,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000540!7.79e-08!6;CL:0000031!7.79e-08!6;CL:0000404!7.79e-08!6;CL:0000047!9.86e-08!8;CL:0000133!2.36e-07!59 | |ontology_enrichment_celltype=CL:0000540!7.79e-08!6;CL:0000031!7.79e-08!6;CL:0000404!7.79e-08!6;CL:0000047!9.86e-08!8;CL:0000133!2.36e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000540;1.99e-10;6!CL:0000404;1.99e-10;6!CL:0000047;1.50e-08;2 | |ontology_enrichment_celltype_v019=CL:0000540;1.99e-10;6!CL:0000404;1.99e-10;6!CL:0000047;1.50e-08;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.02e-16,8;CL:0000540,1.81e-10,6;CL:0000031,1.81e-10,6;CL:0000404,1.81e-10,6 | |||
|ontology_enrichment_development_v019=UBERON:0006215;4.48e-44;3!UBERON:0006222;2.21e-15;1!CL:0000031;1.99e-10;6 | |ontology_enrichment_development_v019=UBERON:0006215;4.48e-44;3!UBERON:0006222;2.21e-15;1!CL:0000031;1.99e-10;6 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.14e-25!94;UBERON:0001016!1.14e-25!94;UBERON:0005743!1.16e-25!86;UBERON:0001017!3.40e-25!82;UBERON:0001049!3.75e-24!57;UBERON:0005068!3.75e-24!57;UBERON:0006241!3.75e-24!57;UBERON:0007135!3.75e-24!57;UBERON:0003075!2.02e-21!86;UBERON:0007284!2.02e-21!86;UBERON:0002780!1.04e-20!41;UBERON:0001890!1.04e-20!41;UBERON:0006240!1.04e-20!41;UBERON:0002616!2.83e-20!59;UBERON:0003080!5.80e-20!42;UBERON:0002346!1.01e-19!90;UBERON:0001893!1.55e-19!34;UBERON:0002791!1.49e-18!33;UBERON:0001869!4.67e-18!32;UBERON:0002020!5.32e-18!34;UBERON:0003528!5.32e-18!34;UBERON:0000955!6.63e-18!69;UBERON:0006238!6.63e-18!69;UBERON:0004121!7.23e-18!169;UBERON:0003056!2.24e-17!61;UBERON:0000033!3.76e-17!123;UBERON:0000153!5.80e-17!129;UBERON:0007811!5.80e-17!129;UBERON:0000924!6.14e-17!173;UBERON:0006601!6.14e-17!173;UBERON:0007023!9.93e-15!115;UBERON:0000956!5.19e-13!25;UBERON:0000203!5.19e-13!25;UBERON:0002619!4.67e-11!22;UBERON:0001950!8.33e-11!20;UBERON:0000481!3.80e-10!347;UBERON:0000477!1.40e-07!286;UBERON:0000475!1.65e-07!365;UBERON:0000025!6.07e-07!194;UBERON:0000922!6.32e-07!612;UBERON:0004111!7.13e-07!241 | |ontology_enrichment_uberon=UBERON:0000073!1.14e-25!94;UBERON:0001016!1.14e-25!94;UBERON:0005743!1.16e-25!86;UBERON:0001017!3.40e-25!82;UBERON:0001049!3.75e-24!57;UBERON:0005068!3.75e-24!57;UBERON:0006241!3.75e-24!57;UBERON:0007135!3.75e-24!57;UBERON:0003075!2.02e-21!86;UBERON:0007284!2.02e-21!86;UBERON:0002780!1.04e-20!41;UBERON:0001890!1.04e-20!41;UBERON:0006240!1.04e-20!41;UBERON:0002616!2.83e-20!59;UBERON:0003080!5.80e-20!42;UBERON:0002346!1.01e-19!90;UBERON:0001893!1.55e-19!34;UBERON:0002791!1.49e-18!33;UBERON:0001869!4.67e-18!32;UBERON:0002020!5.32e-18!34;UBERON:0003528!5.32e-18!34;UBERON:0000955!6.63e-18!69;UBERON:0006238!6.63e-18!69;UBERON:0004121!7.23e-18!169;UBERON:0003056!2.24e-17!61;UBERON:0000033!3.76e-17!123;UBERON:0000153!5.80e-17!129;UBERON:0007811!5.80e-17!129;UBERON:0000924!6.14e-17!173;UBERON:0006601!6.14e-17!173;UBERON:0007023!9.93e-15!115;UBERON:0000956!5.19e-13!25;UBERON:0000203!5.19e-13!25;UBERON:0002619!4.67e-11!22;UBERON:0001950!8.33e-11!20;UBERON:0000481!3.80e-10!347;UBERON:0000477!1.40e-07!286;UBERON:0000475!1.65e-07!365;UBERON:0000025!6.07e-07!194;UBERON:0000922!6.32e-07!612;UBERON:0004111!7.13e-07!241 | ||
|ontology_enrichment_uberon_v019=UBERON:0002037;1.97e-22;6!UBERON:0004733;1.63e-19;12!UBERON:0002028;1.63e-19;12!UBERON:0004732;4.83e-18;13!UBERON:0002680;3.51e-15;9!UBERON:0001895;3.51e-15;9!UBERON:0000073;1.42e-09;53!UBERON:0002616;1.42e-09;53!UBERON:0002771;2.40e-08;2!UBERON:0001016;1.81e-07;83!UBERON:0000955;9.72e-07;68 | |ontology_enrichment_uberon_v019=UBERON:0002037;1.97e-22;6!UBERON:0004733;1.63e-19;12!UBERON:0002028;1.63e-19;12!UBERON:0004732;4.83e-18;13!UBERON:0002680;3.51e-15;9!UBERON:0001895;3.51e-15;9!UBERON:0000073;1.42e-09;53!UBERON:0002616;1.42e-09;53!UBERON:0002771;2.40e-08;2!UBERON:0001016;1.81e-07;83!UBERON:0000955;9.72e-07;68 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,1.97e-22,6;UBERON:0006215,1.97e-22,6;UBERON:0004733,1.67e-19,12;UBERON:0002028,1.67e-19,12;UBERON:0007277,1.67e-19,12;UBERON:0004732,4.94e-18,13;UBERON:0001017,3.89e-16,81;UBERON:0003076,1.13e-15,15;UBERON:0003057,1.13e-15,15;UBERON:0002680,3.52e-15,9;UBERON:0001895,3.52e-15,9;UBERON:0010092,3.52e-15,9;UBERON:0001016,1.85e-14,89;UBERON:0000073,2.01e-12,53;UBERON:0002616,2.01e-12,53;UBERON:0001049,9.61e-12,56;UBERON:0005068,9.61e-12,56;UBERON:0006241,9.61e-12,56;UBERON:0007135,9.61e-12,56;UBERON:0000955,1.82e-09,68;UBERON:0006238,1.82e-09,68;UBERON:0004121,1.01e-08,171;UBERON:0000924,1.01e-08,171;UBERON:0006601,1.01e-08,171;UBERON:0002771,2.87e-08,2;UBERON:0010371,6.01e-08,104;UBERON:0003075,6.74e-08,82;UBERON:0007284,6.74e-08,82;UBERON:0011216,9.68e-08,223;UBERON:0002346,1.65e-07,86 | |||
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| ||
|short_description=p12@ETV1 | |short_description=p12@ETV1 | ||
}} | }} |
Revision as of 05:08, 17 November 2012
Short description: | p12@ETV1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_ETV1_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | 23bp_to_ENST00000460438_5end |
EntrezGene: | ETV1 |
HGNC: | 3490 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.02e-16 | 8 |
neuron | 1.81e-10 | 6 |
neuroblast | 1.81e-10 | 6 |
electrically signaling cell | 1.81e-10 | 6 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 1.97e-22 | 6 |
rhombic lip | 1.97e-22 | 6 |
segmental subdivision of hindbrain | 1.67e-19 | 12 |
hindbrain | 1.67e-19 | 12 |
presumptive hindbrain | 1.67e-19 | 12 |
segmental subdivision of nervous system | 4.94e-18 | 13 |
central nervous system | 3.89e-16 | 81 |
posterior neural tube | 1.13e-15 | 15 |
chordal neural plate | 1.13e-15 | 15 |
regional part of metencephalon | 3.52e-15 | 9 |
metencephalon | 3.52e-15 | 9 |
future metencephalon | 3.52e-15 | 9 |
nervous system | 1.85e-14 | 89 |
regional part of nervous system | 2.01e-12 | 53 |
regional part of brain | 2.01e-12 | 53 |
neural tube | 9.61e-12 | 56 |
neural rod | 9.61e-12 | 56 |
future spinal cord | 9.61e-12 | 56 |
neural keel | 9.61e-12 | 56 |
brain | 1.82e-09 | 68 |
future brain | 1.82e-09 | 68 |
ectoderm-derived structure | 1.01e-08 | 171 |
ectoderm | 1.01e-08 | 171 |
presumptive ectoderm | 1.01e-08 | 171 |
middle temporal gyrus | 2.87e-08 | 2 |
ecto-epithelium | 6.01e-08 | 104 |
neural plate | 6.74e-08 | 82 |
presumptive neural plate | 6.74e-08 | 82 |
organ system subdivision | 9.68e-08 | 223 |
neurectoderm | 1.65e-07 | 86 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.