FFCP PHASE1:Hg19::chr3:187871366..187871377,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000557!9.27e-27!71;CL:0000766!4.22e-26!76;CL:0002057!2.88e-25!42;CL:0002009!4.03e-25!65;CL:0002194!4.81e-24!63;CL:0000576!4.81e-24!63;CL:0000040!4.81e-24!63;CL:0000559!4.81e-24!63;CL:0000839!1.76e-23!70;CL:0000860!2.54e-23!45;CL:0000763!5.96e-23!112;CL:0000049!5.96e-23!112;CL:0000037!3.19e-11!172;CL:0000566!3.19e-11!172;CL:0000738!1.20e-10!140;CL:0000988!3.35e-10!182;CL:0002032!8.80e-10!165;CL:0000837!8.80e-10!165;CL:0002393!4.82e-09!9;CL:0002397!4.82e-09!9;CL:0002087!2.38e-08!119;CL:0002031!2.50e-08!124 | |ontology_enrichment_celltype=CL:0000557!9.27e-27!71;CL:0000766!4.22e-26!76;CL:0002057!2.88e-25!42;CL:0002009!4.03e-25!65;CL:0002194!4.81e-24!63;CL:0000576!4.81e-24!63;CL:0000040!4.81e-24!63;CL:0000559!4.81e-24!63;CL:0000839!1.76e-23!70;CL:0000860!2.54e-23!45;CL:0000763!5.96e-23!112;CL:0000049!5.96e-23!112;CL:0000037!3.19e-11!172;CL:0000566!3.19e-11!172;CL:0000738!1.20e-10!140;CL:0000988!3.35e-10!182;CL:0002032!8.80e-10!165;CL:0000837!8.80e-10!165;CL:0002393!4.82e-09!9;CL:0002397!4.82e-09!9;CL:0002087!2.38e-08!119;CL:0002031!2.50e-08!124 | ||
|ontology_enrichment_celltype_v019=CL:0000576;7.89e-36;48!CL:0000860;4.14e-24;33!CL:0002057;4.14e-24;33!CL:0002393;2.09e-21;6!CL:0002397;2.09e-21;6!CL:0000766;3.19e-19;69!CL:0000473;2.70e-17;39!CL:0000234;2.70e-17;39!CL:0000763;6.17e-13;100!CL:0002087;1.85e-09;104!CL:0000738;1.33e-07;136 | |ontology_enrichment_celltype_v019=CL:0000576;7.89e-36;48!CL:0000860;4.14e-24;33!CL:0002057;4.14e-24;33!CL:0002393;2.09e-21;6!CL:0002397;2.09e-21;6!CL:0000766;3.19e-19;69!CL:0000473;2.70e-17;39!CL:0000234;2.70e-17;39!CL:0000763;6.17e-13;100!CL:0002087;1.85e-09;104!CL:0000738;1.33e-07;136 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.08e-47,42;CL:0002057,1.08e-47,42;CL:0002009,4.80e-45,61;CL:0000557,1.32e-43,67;CL:0002194,2.02e-43,59;CL:0000576,2.02e-43,59;CL:0000040,2.02e-43,59;CL:0000559,2.02e-43,59;CL:0000473,6.61e-41,48;CL:0000234,6.61e-41,48;CL:0000766,4.65e-40,72;CL:0000839,4.27e-38,66;CL:0000763,1.57e-32,108;CL:0000049,1.57e-32,108;CL:0002393,4.24e-25,9;CL:0002397,4.24e-25,9;CL:0000738,3.37e-22,136;CL:0002087,3.85e-22,115;CL:0000037,1.33e-20,168;CL:0000988,2.02e-20,177;CL:0002031,2.41e-19,120;CL:0002032,4.90e-19,161;CL:0000837,4.90e-19,161;CL:0000134,1.36e-07,354;CL:0002320,2.86e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;1.45e-32;42!CL:0000049;4.19e-10;108 | |ontology_enrichment_development_v019=CL:0002057;1.45e-32;42!CL:0000049;4.19e-10;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.16e-26!112;UBERON:0002390!1.60e-25!102;UBERON:0003061!1.60e-25!102;UBERON:0002371!2.84e-24!80;UBERON:0001474!1.68e-23!86;UBERON:0002405!7.38e-22!115;UBERON:0004765!2.52e-21!101;UBERON:0001434!2.52e-21!101;UBERON:0007023!1.15e-18!115;UBERON:0002204!7.93e-11!167;UBERON:0001049!1.16e-09!57;UBERON:0005068!1.16e-09!57;UBERON:0006241!1.16e-09!57;UBERON:0007135!1.16e-09!57;UBERON:0003081!1.88e-09!216;UBERON:0002616!6.01e-08!59;UBERON:0002346!1.48e-07!90;UBERON:0003075!2.11e-07!86;UBERON:0007284!2.11e-07!86 | |ontology_enrichment_uberon=UBERON:0002193!2.16e-26!112;UBERON:0002390!1.60e-25!102;UBERON:0003061!1.60e-25!102;UBERON:0002371!2.84e-24!80;UBERON:0001474!1.68e-23!86;UBERON:0002405!7.38e-22!115;UBERON:0004765!2.52e-21!101;UBERON:0001434!2.52e-21!101;UBERON:0007023!1.15e-18!115;UBERON:0002204!7.93e-11!167;UBERON:0001049!1.16e-09!57;UBERON:0005068!1.16e-09!57;UBERON:0006241!1.16e-09!57;UBERON:0007135!1.16e-09!57;UBERON:0003081!1.88e-09!216;UBERON:0002616!6.01e-08!59;UBERON:0002346!1.48e-07!90;UBERON:0003075!2.11e-07!86;UBERON:0007284!2.11e-07!86 | ||
|ontology_enrichment_uberon_v019=UBERON:0005090;2.03e-08;2!UBERON:0001630;2.03e-08;2 | |ontology_enrichment_uberon_v019=UBERON:0005090;2.03e-08;2!UBERON:0001630;2.03e-08;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.42e-37,76;UBERON:0002193,3.06e-36,108;UBERON:0002390,4.55e-36,98;UBERON:0003061,4.55e-36,98;UBERON:0002405,5.41e-36,93;UBERON:0001474,2.78e-34,82;UBERON:0004765,1.44e-30,90;UBERON:0001434,9.27e-27,100;UBERON:0002204,1.42e-16,167;UBERON:0003081,3.37e-15,203;UBERON:0005090,1.74e-08,2;UBERON:0001630,1.74e-08,2;UBERON:0000926,3.97e-08,315;UBERON:0004120,3.97e-08,315;UBERON:0006603,3.97e-08,315;UBERON:0002384,1.96e-07,371 | |||
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| ||
|short_description=p20@LPP | |short_description=p20@LPP | ||
}} | }} |
Revision as of 21:38, 17 November 2012
Short description: | p20@LPP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_20_at_LPP_5end |
Coexpression cluster: | NA |
Association with transcript: | -282bp_to_ENST00000416784_5end |
EntrezGene: | LPP |
HGNC: | 6679 |
UniProt: | C9J4E3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.08e-47 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.08e-47 | 42 |
macrophage dendritic cell progenitor | 4.80e-45 | 61 |
granulocyte monocyte progenitor cell | 1.32e-43 | 67 |
monopoietic cell | 2.02e-43 | 59 |
monocyte | 2.02e-43 | 59 |
monoblast | 2.02e-43 | 59 |
promonocyte | 2.02e-43 | 59 |
defensive cell | 6.61e-41 | 48 |
phagocyte | 6.61e-41 | 48 |
myeloid leukocyte | 4.65e-40 | 72 |
myeloid lineage restricted progenitor cell | 4.27e-38 | 66 |
myeloid cell | 1.57e-32 | 108 |
common myeloid progenitor | 1.57e-32 | 108 |
intermediate monocyte | 4.24e-25 | 9 |
CD14-positive, CD16-positive monocyte | 4.24e-25 | 9 |
leukocyte | 3.37e-22 | 136 |
nongranular leukocyte | 3.85e-22 | 115 |
hematopoietic stem cell | 1.33e-20 | 168 |
hematopoietic cell | 2.02e-20 | 177 |
hematopoietic lineage restricted progenitor cell | 2.41e-19 | 120 |
hematopoietic oligopotent progenitor cell | 4.90e-19 | 161 |
hematopoietic multipotent progenitor cell | 4.90e-19 | 161 |
mesenchymal cell | 1.36e-07 | 354 |
connective tissue cell | 2.86e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.42e-37 | 76 |
hemolymphoid system | 3.06e-36 | 108 |
hematopoietic system | 4.55e-36 | 98 |
blood island | 4.55e-36 | 98 |
immune system | 5.41e-36 | 93 |
bone element | 2.78e-34 | 82 |
skeletal element | 1.44e-30 | 90 |
skeletal system | 9.27e-27 | 100 |
musculoskeletal system | 1.42e-16 | 167 |
lateral plate mesoderm | 3.37e-15 | 203 |
muscle structure | 1.74e-08 | 2 |
muscle organ | 1.74e-08 | 2 |
mesoderm | 3.97e-08 | 315 |
mesoderm-derived structure | 3.97e-08 | 315 |
presumptive mesoderm | 3.97e-08 | 315 |
connective tissue | 1.96e-07 | 371 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.