FFCP PHASE1:Hg19::chr5:157079401..157079413,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0002541!2.89e-12!3 | |ontology_enrichment_celltype=CL:0002541!2.89e-12!3 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.08e-27;10!UBERON:0005564;2.08e-27;10 | |ontology_enrichment_development_v019=UBERON:0009117;2.08e-27;10!UBERON:0005564;2.08e-27;10 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000473!8.09e-38!8;UBERON:0003135!8.90e-28!11;UBERON:0000991!5.66e-15!21;UBERON:0009196!5.66e-15!21;UBERON:0009117!5.66e-15!21;UBERON:0005564!5.66e-15!21;UBERON:0004176!2.49e-14!22;UBERON:0003101!2.49e-14!22;UBERON:0000079!2.49e-14!22;UBERON:0000476!2.89e-12!3;UBERON:0000920!2.89e-12!3;UBERON:0002046!7.49e-08!5;UBERON:0004117!7.49e-08!5;UBERON:0007689!7.49e-08!5;UBERON:0007123!7.49e-08!5;UBERON:0003091!7.49e-08!5;UBERON:0002323!3.12e-07!46;UBERON:0003133!5.88e-07!48;UBERON:0004458!7.91e-07!49 | |ontology_enrichment_uberon=UBERON:0000473!8.09e-38!8;UBERON:0003135!8.90e-28!11;UBERON:0000991!5.66e-15!21;UBERON:0009196!5.66e-15!21;UBERON:0009117!5.66e-15!21;UBERON:0005564!5.66e-15!21;UBERON:0004176!2.49e-14!22;UBERON:0003101!2.49e-14!22;UBERON:0000079!2.49e-14!22;UBERON:0000476!2.89e-12!3;UBERON:0000920!2.89e-12!3;UBERON:0002046!7.49e-08!5;UBERON:0004117!7.49e-08!5;UBERON:0007689!7.49e-08!5;UBERON:0007123!7.49e-08!5;UBERON:0003091!7.49e-08!5;UBERON:0002323!3.12e-07!46;UBERON:0003133!5.88e-07!48;UBERON:0004458!7.91e-07!49 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;6.50e-34;8!UBERON:0003135;4.86e-25;11!UBERON:0000991;1.02e-13;21!UBERON:0003101;3.77e-13;22!UBERON:0000079;3.77e-13;22 | |ontology_enrichment_uberon_v019=UBERON:0000473;6.50e-34;8!UBERON:0003135;4.86e-25;11!UBERON:0000991;1.02e-13;21!UBERON:0003101;3.77e-13;22!UBERON:0000079;3.77e-13;22 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,6.50e-34,8;UBERON:0003135,4.86e-25,11;UBERON:0000991,1.02e-13,21;UBERON:0009196,1.02e-13,21;UBERON:0009117,1.02e-13,21;UBERON:0005564,1.02e-13,21;UBERON:0004176,3.77e-13,22;UBERON:0003101,3.77e-13,22;UBERON:0000079,3.77e-13,22;UBERON:0002323,7.30e-07,46 | |||
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|short_description=p3@SOX30 | |short_description=p3@SOX30 | ||
}} | }} |
Revision as of 19:48, 19 November 2012
Short description: | p3@SOX30 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_SOX30_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 14bp_to_ENST00000265007, NM_007017, NM_178424, uc003lxb.1, uc003lxc.1_5end |
EntrezGene: | SOX30 |
HGNC: | 30635 |
UniProt: | O94993 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
testis | 6.50e-34 | 8 |
male reproductive organ | 4.86e-25 | 11 |
gonad | 1.02e-13 | 21 |
indifferent external genitalia | 1.02e-13 | 21 |
indifferent gonad | 1.02e-13 | 21 |
gonad primordium | 1.02e-13 | 21 |
external genitalia | 3.77e-13 | 22 |
male organism | 3.77e-13 | 22 |
male reproductive system | 3.77e-13 | 22 |
body cavity | 7.30e-07 | 46 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.