FFCP PHASE1:Hg19::chr11:1777573..1777587,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:1777573..1777587,-|id=chr11:1777573..1777587,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000322;1.31e-14;3|ontology_enrichment_celltype_v019_2=CL:0000322,1.40e-14,3|ontology_enrichment_development_v019=UBERON:0000358;8.10e-41;1!UBERON:0003056;1.83e-14;3|ontology_enrichment_disease=DOID:178!1.18e-07!1;DOID:326!1.18e-07!1;DOID:3978!1.18e-07!1;DOID:3394!1.18e-07!1;DOID:5844!1.18e-07!1|ontology_enrichment_disease_v019=DOID:3910;3.44e-21;2!DOID:3908;2.63e-09;5!DOID:1325;5.22e-07;7!DOID:3904;5.22e-07;7|ontology_enrichment_disease_v019_2=DOID:3910,3.81e-21,2;DOID:3908,2.74e-09,5;DOID:1325,5.38e-07,7;DOID:3904,5.38e-07,7|ontology_enrichment_uberon=UBERON:0001896!1.23e-19!3;UBERON:0005290!1.23e-19!3;UBERON:0010096!1.23e-19!3;UBERON:0007023!3.14e-15!115;UBERON:0002171!1.10e-07!1;UBERON:0006518!1.10e-07!1;UBERON:0008949!1.10e-07!1;UBERON:0000101!1.10e-07!1;UBERON:0002167!1.10e-07!1;UBERON:0002298!1.15e-07!8;UBERON:0002336!1.33e-07!1;UBERON:0001018!1.33e-07!1;UBERON:0002473!1.33e-07!1;UBERON:0005340!1.33e-07!1;UBERON:0002316!1.33e-07!1;UBERON:0003544!1.33e-07!1;UBERON:0001020!1.33e-07!1;UBERON:0005970!1.33e-07!1;UBERON:0002437!1.33e-07!1;UBERON:0002372!4.09e-07!1;UBERON:0001961!4.09e-07!1;UBERON:0001744!4.09e-07!1;UBERON:0001735!4.09e-07!1;UBERON:0002581!4.34e-07!1;UBERON:0001049!4.61e-07!57;UBERON:0005068!4.61e-07!57;UBERON:0006241!4.61e-07!57;UBERON:0007135!4.61e-07!57;UBERON:0003076!7.26e-07!15;UBERON:0003057!7.26e-07!15|ontology_enrichment_uberon_v019=UBERON:0004903;3.44e-21;2!UBERON:0002173;3.44e-21;2!UBERON:0002186;3.44e-21;2!UBERON:0003127;5.69e-21;2!UBERON:0004821;1.31e-14;3!UBERON:0007499;1.31e-14;3!UBERON:0003215;1.31e-14;3!UBERON:0010368;1.31e-14;3!UBERON:0009911;1.31e-14;3!UBERON:0002299;1.31e-14;3!UBERON:0006524;1.31e-14;3!UBERON:0008874;1.31e-14;3!UBERON:0002169;1.31e-14;3!UBERON:0004894;1.31e-14;3!UBERON:0001896;1.83e-14;3!UBERON:0005290;1.83e-14;3!UBERON:0007196;1.31e-11;15!UBERON:0001558;1.31e-11;15!UBERON:0009856;2.66e-11;4!UBERON:0000966;3.22e-09;5!UBERON:0005388;3.22e-09;5!UBERON:0001802;3.22e-09;5!UBERON:0002298;6.78e-08;6!UBERON:0003126;6.04e-07;7!UBERON:0001005;6.04e-07;7|ontology_enrichment_uberon_v019_2=UBERON:0004903,3.81e-21,2;UBERON:0002173,3.81e-21,2;UBERON:0002186,3.81e-21,2;UBERON:0003127,5.70e-21,2;UBERON:0004821,1.40e-14,3;UBERON:0003215,1.40e-14,3;UBERON:0010368,1.40e-14,3;UBERON:0009911,1.40e-14,3;UBERON:0002299,1.40e-14,3;UBERON:0006524,1.40e-14,3;UBERON:0008874,1.40e-14,3;UBERON:0002169,1.40e-14,3;UBERON:0004894,1.40e-14,3;UBERON:0001896,2.09e-14,3;UBERON:0005290,2.09e-14,3;UBERON:0010096,2.09e-14,3;UBERON:0007196,1.34e-11,15;UBERON:0001558,1.34e-11,15;UBERON:0000966,6.34e-08,6;UBERON:0005388,6.34e-08,6;UBERON:0001802,6.34e-08,6;UBERON:0002298,7.25e-08,6;UBERON:0003126,6.04e-07,7;UBERON:0001005,6.04e-07,7|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.03402920234213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0.337005664903385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.157611414598396,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.78602152549833,0.414239055347196,0,0,0,0,0,0,0,0.327872630709804,0,0,0,0,1.14681839138014,0.665574309221114,0.310482014706917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0.256241518587947,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:1777573..1777587,- | |||
|id=chr11:1777573..1777587,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000322;1.31e-14;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000322,1.40e-14,3 | |||
|ontology_enrichment_development_v019=UBERON:0000358;8.10e-41;1!UBERON:0003056;1.83e-14;3 | |||
|ontology_enrichment_disease=DOID:178!1.18e-07!1;DOID:326!1.18e-07!1;DOID:3978!1.18e-07!1;DOID:3394!1.18e-07!1;DOID:5844!1.18e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:3910;3.44e-21;2!DOID:3908;2.63e-09;5!DOID:1325;5.22e-07;7!DOID:3904;5.22e-07;7 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,3.81e-21,2;DOID:3908,2.74e-09,5;DOID:1325,5.38e-07,7;DOID:3904,5.38e-07,7 | |||
|ontology_enrichment_uberon=UBERON:0001896!1.23e-19!3;UBERON:0005290!1.23e-19!3;UBERON:0010096!1.23e-19!3;UBERON:0007023!3.14e-15!115;UBERON:0002171!1.10e-07!1;UBERON:0006518!1.10e-07!1;UBERON:0008949!1.10e-07!1;UBERON:0000101!1.10e-07!1;UBERON:0002167!1.10e-07!1;UBERON:0002298!1.15e-07!8;UBERON:0002336!1.33e-07!1;UBERON:0001018!1.33e-07!1;UBERON:0002473!1.33e-07!1;UBERON:0005340!1.33e-07!1;UBERON:0002316!1.33e-07!1;UBERON:0003544!1.33e-07!1;UBERON:0001020!1.33e-07!1;UBERON:0005970!1.33e-07!1;UBERON:0002437!1.33e-07!1;UBERON:0002372!4.09e-07!1;UBERON:0001961!4.09e-07!1;UBERON:0001744!4.09e-07!1;UBERON:0001735!4.09e-07!1;UBERON:0002581!4.34e-07!1;UBERON:0001049!4.61e-07!57;UBERON:0005068!4.61e-07!57;UBERON:0006241!4.61e-07!57;UBERON:0007135!4.61e-07!57;UBERON:0003076!7.26e-07!15;UBERON:0003057!7.26e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0004903;3.44e-21;2!UBERON:0002173;3.44e-21;2!UBERON:0002186;3.44e-21;2!UBERON:0003127;5.69e-21;2!UBERON:0004821;1.31e-14;3!UBERON:0007499;1.31e-14;3!UBERON:0003215;1.31e-14;3!UBERON:0010368;1.31e-14;3!UBERON:0009911;1.31e-14;3!UBERON:0002299;1.31e-14;3!UBERON:0006524;1.31e-14;3!UBERON:0008874;1.31e-14;3!UBERON:0002169;1.31e-14;3!UBERON:0004894;1.31e-14;3!UBERON:0001896;1.83e-14;3!UBERON:0005290;1.83e-14;3!UBERON:0007196;1.31e-11;15!UBERON:0001558;1.31e-11;15!UBERON:0009856;2.66e-11;4!UBERON:0000966;3.22e-09;5!UBERON:0005388;3.22e-09;5!UBERON:0001802;3.22e-09;5!UBERON:0002298;6.78e-08;6!UBERON:0003126;6.04e-07;7!UBERON:0001005;6.04e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,3.81e-21,2;UBERON:0002173,3.81e-21,2;UBERON:0002186,3.81e-21,2;UBERON:0003127,5.70e-21,2;UBERON:0004821,1.40e-14,3;UBERON:0003215,1.40e-14,3;UBERON:0010368,1.40e-14,3;UBERON:0009911,1.40e-14,3;UBERON:0002299,1.40e-14,3;UBERON:0006524,1.40e-14,3;UBERON:0008874,1.40e-14,3;UBERON:0002169,1.40e-14,3;UBERON:0004894,1.40e-14,3;UBERON:0001896,2.09e-14,3;UBERON:0005290,2.09e-14,3;UBERON:0010096,2.09e-14,3;UBERON:0007196,1.34e-11,15;UBERON:0001558,1.34e-11,15;UBERON:0000966,6.34e-08,6;UBERON:0005388,6.34e-08,6;UBERON:0001802,6.34e-08,6;UBERON:0002298,7.25e-08,6;UBERON:0003126,6.04e-07,7;UBERON:0001005,6.04e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.03402920234213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0.337005664903385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.157611414598396,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.78602152549833,0.414239055347196,0,0,0,0,0,0,0,0.327872630709804,0,0,0,0,1.14681839138014,0.665574309221114,0.310482014706917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0.256241518587947,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,1.92986669276972,0,0,0,0,0,0,0,0.860454717640555,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,1.43444410785353,0,0,0,0,0,2.34640942403454,0,0,0,0,0 | |||
|short_description=p@chr11:1777573..1777587,- | |||
}} |
Revision as of 16:57, 10 September 2013
Short description: | p@chr11:1777573..1777587, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:1777573..1777587, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 1.40e-14 | 3 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 3.81e-21 | 2 |
alveolar duct | 3.81e-21 | 2 |
bronchiole | 3.81e-21 | 2 |
open tracheal system trachea | 5.70e-21 | 2 |
pulmonary alveolus epithelium | 1.40e-14 | 3 |
alveolus | 1.40e-14 | 3 |
pulmonary lobule | 1.40e-14 | 3 |
lobule | 1.40e-14 | 3 |
alveolus of lung | 1.40e-14 | 3 |
alveolar system | 1.40e-14 | 3 |
pulmonary acinus | 1.40e-14 | 3 |
alveolar sac | 1.40e-14 | 3 |
alveolar wall | 1.40e-14 | 3 |
medulla oblongata | 2.09e-14 | 3 |
myelencephalon | 2.09e-14 | 3 |
future myelencephalon | 2.09e-14 | 3 |
tracheobronchial tree | 1.34e-11 | 15 |
lower respiratory tract | 1.34e-11 | 15 |
retina | 6.34e-08 | 6 |
photoreceptor array | 6.34e-08 | 6 |
posterior segment of eyeball | 6.34e-08 | 6 |
brainstem | 7.25e-08 | 6 |
trachea | 6.04e-07 | 7 |
respiratory airway | 6.04e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 3.81e-21 | 2 |
non-small cell lung carcinoma | 2.74e-09 | 5 |
bronchus cancer | 5.38e-07 | 7 |
bronchogenic carcinoma | 5.38e-07 | 7 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.