FFCP PHASE1:Hg19::chr11:34269639..34269643,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:34269639..34269643,-|id=chr11:34269639..34269643,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000222;2.46e-12;1!CL:0001014;8.52e-07;2!CL:0001016;8.52e-07;2|ontology_enrichment_celltype_v019_2=CL:0001014,8.52e-07,2;CL:0001016,8.52e-07,2|ontology_enrichment_development_v019=UBERON:0005754;2.46e-12;1!UBERON:0007297;8.52e-07;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:4929;8.52e-07;2|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.41e-11!115;UBERON:0001049!9.40e-11!57;UBERON:0005068!9.40e-11!57;UBERON:0006241!9.40e-11!57;UBERON:0007135!9.40e-11!57;UBERON:0000073!2.25e-09!94;UBERON:0001016!2.25e-09!94;UBERON:0001017!3.19e-08!82;UBERON:0005743!5.68e-08!86;UBERON:0003080!1.10e-07!42;UBERON:0002616!1.55e-07!59;UBERON:0003075!1.90e-07!86;UBERON:0007284!1.90e-07!86;UBERON:0002346!2.41e-07!90;UBERON:0002780!4.58e-07!41;UBERON:0001890!4.58e-07!41;UBERON:0006240!4.58e-07!41|ontology_enrichment_uberon_v019=UBERON:0006947;6.99e-16;3!UBERON:0004054;6.99e-16;3!UBERON:0002114;1.32e-15;2!UBERON:0001000;9.36e-13;1!UBERON:0005352;9.36e-13;1!UBERON:0000998;2.46e-12;1!UBERON:0004913;2.46e-12;1!UBERON:0006868;2.46e-12;1!UBERON:0003703;2.46e-12;1!UBERON:0001174;2.46e-12;1!UBERON:0004914;2.46e-12;1!UBERON:0005904;3.75e-12;4!UBERON:0000058;1.35e-10;10!UBERON:0002108;9.69e-10;4|ontology_enrichment_uberon_v019_2=UBERON:0006947,4.99e-16,3;UBERON:0004054,4.99e-16,3;UBERON:0002114,1.91e-15,2;UBERON:0001000,8.85e-13,1;UBERON:0005352,8.85e-13,1;UBERON:0000998,1.57e-12,1;UBERON:0006868,1.57e-12,1;UBERON:0005904,2.92e-12,4;UBERON:0004913,3.85e-12,1;UBERON:0003703,3.85e-12,1;UBERON:0001174,3.85e-12,1;UBERON:0004914,3.85e-12,1;UBERON:0002108,1.21e-09,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,1.66198622559563,0.200544447470142,0.868043482863407,0,0,0,0,0,0,0,0,0.929119112685311,0,0,0.47296445977717,0,0.645484683583826,0,0,0,0,0,0,1.91801137739712,0,0.199463657621632,0,0,2.26954089876456,3.11411124497787,0,0,0.217188844705117,0.605399502633369,0,2.21523671208619,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0.400395987036012,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0.512365278902701,0.260118695119756,0.164437904603676,0.276350017785848,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0.434473211648397,0,0,0,0,0,0,0,0.486634870302636,0.189069634328136,0,0.175669571386252,0.392937226493138,0,0,0.324547393654683,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397227542439656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0.286804595389004,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.94848165003288,1.18157981336281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.299918973546171,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0.215627574859517,0.128343036279748,0,0,0.773288812777695,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0.182091168006717,0.262248829918848,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0.487426979262569,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0.476463550915578,0,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0.307240764308458,0,0.333698283423817,0,0,0,0,0,0,0,0.146508179271894,0,0,0.284136146806413,0.47748896947538,0,0,0,0.140669416410513,0.445234820091624,0,0,0.398495976502139,0,0.503865495708552,0,0.738508832766417,0,0.808815160325942,0.179021174675609,0,0,0,0,0,0,0,0.520855522170466,0.0874599999961957,0.724999575434793,0.1137934482855,0,0,0,0,0,0,0.241192877250816,0,0,0.295547618953547,0.219385397153973,0,0.139423744278603,0.230850775511391,0,0.23056390438806,0,0.54323685961004,0.31900115973192,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0.530745387020035,0,1.18608451472249,0.370691816839509,0.835375596043643,0.269604531922708,0,0.234264445725339,0,0,0,2.76209081994573,0,0.61214552326098,0.063186579628488,0.300646838828985,0.207376382794494,0,0,0.313932918407225,0,0.569219092059585,0.138674673013139,0.347119476670262,0.0979923974143777,0.261177619741208,0.17472666824203,0,0.19351266257817,0.146178634172371,0,0,0.0882561266915003,0.451961481561065,0.137041924646751,0.19871461170299,0.0633107959558787,0.195551382734803,0.240476460754601,0,0.39961921916426,0.432271251462318,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.279282401272254,0,0,0,0,0,0.0671834724867263,0,0,0.315132729228895,0.329663433524666,0.202210631562555,0,0.0846733320657845,0,0.136203406111576,0,0.137539436597234,0,1.349843349309,0.77380195455795,0.0607495566580247,0,0.472834243795189,0.367182116944987,0.422401346077626,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0.113312091520126,0.439656701034247,0,0,0.39669780522807,0.513260513652988,0,0,0,0,0,0,0.60896299190448,0,1.08803560673895,0,0.306345576763462,0,0,0,0,0.1251909307065,0.573409195690071,0.443716206147409,0.558867626472451,0,0.249960815924213,0.909894705249887,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0.336749488765919,1.26184898228651,0,0,0,0,0,0,0,0,0,0,0.38582807654183,0.168942440653073,0,0,0,0.138258436151731,0.194860308839388,0.132864840313363,0,0,0.983091635014877,0,0,0.106691729694141,0,0,0.184105950251841,0,0,0,0.107824811396682,0.471797825567689,0.109209638192014,0,0,1.85903646388503,0.558644917973244,0,0,0,0,0,0.128458450192919,1.41696576325585,0.159633859057151,0.205116364240755,0.504143392443436,0,0.322951291263702,0,0.0981477185010256,0,0,0,0,0,0,0,0.20170506870352,0.781514011233092,0.261906694481422,0.327543835020193,1.18284868973636,0.0675375846183947,0.781078098613847,0.206686796501184,0.0634158101939068,0,0.548257766857182,0,0,0,0,0,0,0.227662191351298,0.266107110487916,0,0,0.543757863814654,0.197318320688547,0,0,0,0,0,0,0,0,0.357382720883282,0.316027223465453,0.581207126840626,0,0,0.414432328326074,0.17071847709395,0,0,0.118332000730565,0.170426809518315,1.69354820076372,0.4582137370881,0,0,0.223710863595585,0.196300467230486,0.121917924982269,0,0,0,0,0,0,0,0,0,0.150962843566674,0.385870790539723,0.437119121007915,0,0,0,0.196308467114945,0.594092800654172,1.6906229103336,0,0,0,0.799529247399431,0,0,0,0,0.917458566809082,0,0.157771562193185,0.203974470572744,1.30905207102113,0,0,0,0,0.252332849670158,0,0.506794004045748,0.101988829741982,0,0,0,0.378893491091197,0.267964130156178,0.829169439458779,0.517164979309476,0.213233981900981,0.476128862927481,0.0645889098360061,0.372448285775147,0.672791175483681,0,0,0,0.684466602170562,0.26940821205835,0,0.665320713092027,0.162806537221949,0,0,0.0898252021065869,0,0.122241444182866,0,0,0,0|short_description=p@chr11:34269639..34269643,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:34269639..34269643,- | |||
|id=chr11:34269639..34269643,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000222;2.46e-12;1!CL:0001014;8.52e-07;2!CL:0001016;8.52e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,8.52e-07,2;CL:0001016,8.52e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0005754;2.46e-12;1!UBERON:0007297;8.52e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4929;8.52e-07;2 | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.41e-11!115;UBERON:0001049!9.40e-11!57;UBERON:0005068!9.40e-11!57;UBERON:0006241!9.40e-11!57;UBERON:0007135!9.40e-11!57;UBERON:0000073!2.25e-09!94;UBERON:0001016!2.25e-09!94;UBERON:0001017!3.19e-08!82;UBERON:0005743!5.68e-08!86;UBERON:0003080!1.10e-07!42;UBERON:0002616!1.55e-07!59;UBERON:0003075!1.90e-07!86;UBERON:0007284!1.90e-07!86;UBERON:0002346!2.41e-07!90;UBERON:0002780!4.58e-07!41;UBERON:0001890!4.58e-07!41;UBERON:0006240!4.58e-07!41 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;6.99e-16;3!UBERON:0004054;6.99e-16;3!UBERON:0002114;1.32e-15;2!UBERON:0001000;9.36e-13;1!UBERON:0005352;9.36e-13;1!UBERON:0000998;2.46e-12;1!UBERON:0004913;2.46e-12;1!UBERON:0006868;2.46e-12;1!UBERON:0003703;2.46e-12;1!UBERON:0001174;2.46e-12;1!UBERON:0004914;2.46e-12;1!UBERON:0005904;3.75e-12;4!UBERON:0000058;1.35e-10;10!UBERON:0002108;9.69e-10;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,4.99e-16,3;UBERON:0004054,4.99e-16,3;UBERON:0002114,1.91e-15,2;UBERON:0001000,8.85e-13,1;UBERON:0005352,8.85e-13,1;UBERON:0000998,1.57e-12,1;UBERON:0006868,1.57e-12,1;UBERON:0005904,2.92e-12,4;UBERON:0004913,3.85e-12,1;UBERON:0003703,3.85e-12,1;UBERON:0001174,3.85e-12,1;UBERON:0004914,3.85e-12,1;UBERON:0002108,1.21e-09,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,1.66198622559563,0.200544447470142,0.868043482863407,0,0,0,0,0,0,0,0,0.929119112685311,0,0,0.47296445977717,0,0.645484683583826,0,0,0,0,0,0,1.91801137739712,0,0.199463657621632,0,0,2.26954089876456,3.11411124497787,0,0,0.217188844705117,0.605399502633369,0,2.21523671208619,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0.400395987036012,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0.512365278902701,0.260118695119756,0.164437904603676,0.276350017785848,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0.434473211648397,0,0,0,0,0,0,0,0.486634870302636,0.189069634328136,0,0.175669571386252,0.392937226493138,0,0,0.324547393654683,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397227542439656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0.286804595389004,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.94848165003288,1.18157981336281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.299918973546171,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0.215627574859517,0.128343036279748,0,0,0.773288812777695,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0.182091168006717,0.262248829918848,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0.487426979262569,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0.476463550915578,0,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0.307240764308458,0,0.333698283423817,0,0,0,0,0,0,0,0.146508179271894,0,0,0.284136146806413,0.47748896947538,0,0,0,0.140669416410513,0.445234820091624,0,0,0.398495976502139,0,0.503865495708552,0,0.738508832766417,0,0.808815160325942,0.179021174675609,0,0,0,0,0,0,0,0.520855522170466,0.0874599999961957,0.724999575434793,0.1137934482855,0,0,0,0,0,0,0.241192877250816,0,0,0.295547618953547,0.219385397153973,0,0.139423744278603,0.230850775511391,0,0.23056390438806,0,0.54323685961004,0.31900115973192,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0.530745387020035,0,1.18608451472249,0.370691816839509,0.835375596043643,0.269604531922708,0,0.234264445725339,0,0,0,2.76209081994573,0,0.61214552326098,0.063186579628488,0.300646838828985,0.207376382794494,0,0,0.313932918407225,0,0.569219092059585,0.138674673013139,0.347119476670262,0.0979923974143777,0.261177619741208,0.17472666824203,0,0.19351266257817,0.146178634172371,0,0,0.0882561266915003,0.451961481561065,0.137041924646751,0.19871461170299,0.0633107959558787,0.195551382734803,0.240476460754601,0,0.39961921916426,0.432271251462318,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.279282401272254,0,0,0,0,0,0.0671834724867263,0,0,0.315132729228895,0.329663433524666,0.202210631562555,0,0.0846733320657845,0,0.136203406111576,0,0.137539436597234,0,1.349843349309,0.77380195455795,0.0607495566580247,0,0.472834243795189,0.367182116944987,0.422401346077626,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0.113312091520126,0.439656701034247,0,0,0.39669780522807,0.513260513652988,0,0,0,0,0,0,0.60896299190448,0,1.08803560673895,0,0.306345576763462,0,0,0,0,0.1251909307065,0.573409195690071,0.443716206147409,0.558867626472451,0,0.249960815924213,0.909894705249887,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0.336749488765919,1.26184898228651,0,0,0,0,0,0,0,0,0,0,0.38582807654183,0.168942440653073,0,0,0,0.138258436151731,0.194860308839388,0.132864840313363,0,0,0.983091635014877,0,0,0.106691729694141,0,0,0.184105950251841,0,0,0,0.107824811396682,0.471797825567689,0.109209638192014,0,0,1.85903646388503,0.558644917973244,0,0,0,0,0,0.128458450192919,1.41696576325585,0.159633859057151,0.205116364240755,0.504143392443436,0,0.322951291263702,0,0.0981477185010256,0,0,0,0,0,0,0,0.20170506870352,0.781514011233092,0.261906694481422,0.327543835020193,1.18284868973636,0.0675375846183947,0.781078098613847,0.206686796501184,0.0634158101939068,0,0.548257766857182,0,0,0,0,0,0,0.227662191351298,0.266107110487916,0,0,0.543757863814654,0.197318320688547,0,0,0,0,0,0,0,0,0.357382720883282,0.316027223465453,0.581207126840626,0,0,0.414432328326074,0.17071847709395,0,0,0.118332000730565,0.170426809518315,1.69354820076372,0.4582137370881,0,0,0.223710863595585,0.196300467230486,0.121917924982269,0,0,0,0,0,0,0,0,0,0.150962843566674,0.385870790539723,0.437119121007915,0,0,0,0.196308467114945,0.594092800654172,1.6906229103336,0,0,0,0.799529247399431,0,0,0,0,0.917458566809082,0,0.157771562193185,0.203974470572744,1.30905207102113,0,0,0,0,0.252332849670158,0,0.506794004045748,0.101988829741982,0,0,0,0.378893491091197,0.267964130156178,0.829169439458779,0.517164979309476,0.213233981900981,0.476128862927481,0.0645889098360061,0.372448285775147,0.672791175483681,0,0,0,0.684466602170562,0.26940821205835,0,0.665320713092027,0.162806537221949,0,0,0.0898252021065869,0,0.122241444182866,0,0,0,0 | |||
|short_description=p@chr11:34269639..34269643,- | |||
}} |
Revision as of 17:33, 10 September 2013
Short description: | p@chr11:34269639..34269643, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:34269639..34269643, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 8.52e-07 | 2 |
immature CD1a-positive Langerhans cell | 8.52e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 4.99e-16 | 3 |
internal male genitalia | 4.99e-16 | 3 |
duodenum | 1.91e-15 | 2 |
vas deferens | 8.85e-13 | 1 |
spermatic cord | 8.85e-13 | 1 |
seminal vesicle | 1.57e-12 | 1 |
seminal fluid secreting gland | 1.57e-12 | 1 |
duct of male reproductive system | 2.92e-12 | 4 |
hepatopancreatic ampulla | 3.85e-12 | 1 |
extrahepatic bile duct | 3.85e-12 | 1 |
common bile duct | 3.85e-12 | 1 |
duodenal papilla | 3.85e-12 | 1 |
small intestine | 1.21e-09 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.