FFCP PHASE1:Hg19::chr11:61722830..61722841,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7439|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=12703|TSSclassifier=S|UniProt=|association_with_transcript=126bp_to_uc010rlv.1_5end|coexpression_cluster_id=C2|description=CAGE_peak_7_at_BEST1_5end|id=chr11:61722830..61722841,+|ontology_enrichment_celltype=CL:0002057!4.75e-67!42;CL:0000766!2.40e-66!76;CL:0000860!1.42e-61!45;CL:0002009!1.74e-54!65;CL:0002194!2.91e-54!63;CL:0000576!2.91e-54!63;CL:0000040!2.91e-54!63;CL:0000559!2.91e-54!63;CL:0000557!7.83e-53!71;CL:0000839!1.54e-51!70;CL:0000738!2.33e-42!140;CL:0000763!1.35e-40!112;CL:0000049!1.35e-40!112;CL:0002087!3.01e-34!119;CL:0002031!2.82e-33!124;CL:0000037!1.07e-31!172;CL:0000566!1.07e-31!172;CL:0002032!3.71e-30!165;CL:0000837!3.71e-30!165;CL:0000988!8.50e-29!182;CL:0002393!7.69e-15!9;CL:0002397!7.69e-15!9;CL:0000094!1.36e-14!8;CL:0000134!1.69e-13!358;CL:0002320!8.27e-13!365;CL:0000048!8.63e-12!430;CL:0000034!1.00e-11!444;CL:0000723!2.69e-11!436;CL:0000219!2.06e-10!390;CL:0000081!4.44e-10!11;CL:0000775!5.79e-07!3|ontology_enrichment_celltype_v019=CL:0000860;9.99e-81;33!CL:0002057;9.99e-81;33!CL:0000576;1.37e-56;48!CL:0000473;4.12e-56;39!CL:0000234;4.12e-56;39!CL:0000766;8.10e-39;69!CL:0002393;3.72e-22;6!CL:0002397;3.72e-22;6!CL:0000094;7.62e-19;8!CL:0000763;3.78e-17;100!CL:0000775;7.28e-14;3!CL:0000081;1.63e-13;11!CL:0002087;2.80e-13;104!CL:0000738;6.30e-12;136!CL:0000771;6.62e-10;2|ontology_enrichment_celltype_v019_2=CL:0000860,1.26e-106,42;CL:0002057,1.26e-106,42;CL:0000473,2.83e-92,48;CL:0000234,2.83e-92,48;CL:0000766,6.15e-83,72;CL:0002194,3.51e-72,59;CL:0000576,3.51e-72,59;CL:0000040,3.51e-72,59;CL:0000559,3.51e-72,59;CL:0002009,1.38e-69,61;CL:0000839,8.81e-64,66;CL:0000557,1.01e-62,67;CL:0000763,1.48e-52,108;CL:0000049,1.48e-52,108;CL:0000738,1.68e-44,136;CL:0002087,8.00e-38,115;CL:0000037,2.60e-34,168;CL:0002032,3.00e-34,161;CL:0000837,3.00e-34,161;CL:0002031,9.95e-34,120;CL:0000988,4.19e-32,177;CL:0002393,1.18e-19,9;CL:0002397,1.18e-19,9;CL:0000094,7.41e-19,8;CL:0000775,7.29e-14,3;CL:0000081,1.60e-13,11;CL:0000134,2.03e-11,354;CL:0002320,5.12e-11,361;CL:0000771,6.63e-10,2;CL:0000219,1.33e-09,386;CL:0000048,7.06e-08,427;CL:0000723,1.22e-07,433;CL:0000034,2.47e-07,441|ontology_enrichment_development_v019=CL:0002057;1.17e-76;42!CL:0000049;2.93e-17;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!5.29e-58!102;UBERON:0003061!5.29e-58!102;UBERON:0002193!1.26e-54!112;UBERON:0002371!5.71e-47!80;UBERON:0001474!1.62e-42!86;UBERON:0004765!1.01e-33!101;UBERON:0001434!1.01e-33!101;UBERON:0002405!1.04e-32!115;UBERON:0003081!7.15e-21!216;UBERON:0002204!9.71e-21!167;UBERON:0000178!2.61e-13!15;UBERON:0000179!2.61e-13!15;UBERON:0000463!2.61e-13!15;UBERON:0002384!7.11e-12!375;UBERON:0000926!4.12e-07!448;UBERON:0004120!4.12e-07!448;UBERON:0006603!4.12e-07!448|ontology_enrichment_uberon_v019=UBERON:0000178;8.93e-21;15!UBERON:0000179;8.93e-21;15!UBERON:0000463;8.93e-21;15!UBERON:0002390;2.27e-08;32|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.28e-68,98;UBERON:0003061,1.28e-68,98;UBERON:0002193,1.81e-61,108;UBERON:0002371,1.97e-54,76;UBERON:0001474,6.68e-50,82;UBERON:0004765,8.60e-45,90;UBERON:0002405,4.23e-43,93;UBERON:0001434,1.52e-39,100;UBERON:0003081,1.83e-28,203;UBERON:0000178,8.54e-21,15;UBERON:0000179,8.54e-21,15;UBERON:0000463,8.54e-21,15;UBERON:0002204,1.64e-20,167;UBERON:0000926,5.26e-15,315;UBERON:0004120,5.26e-15,315;UBERON:0006603,5.26e-15,315;UBERON:0002384,1.81e-10,371|phase1_expression=0.363356758541113,0.214100523890983,0.140954404095971,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0.767658796194425,1.54816123316076,0,0,0,0,0,0.293600439334847,1.10799081706375,2.4065333696417,1.95309783644267,0,0.32389366601898,0.257575567634187,1.89017710413434,1.51150377475524,1.4555043671269,2.32429036905685,2.46700732813095,3.09706370895104,0.575384784644301,2.30544635876191,3.78371567821736,2.75796544589295,3.22742341791913,5.41705946377367,4.1413314699373,5.18521685109907,4.71919317334678,2.75475503133812,2.56743221660875,1.91801137739712,1.31940520074686,2.19410023383795,2.55734850319616,0.290209238628584,0.56738522469114,0.622822248995575,2.51248665256743,2.60741459210101,5.2125322729228,1.81619850790011,1.10483290796269,0.632924774881769,1.26753171787165,1.70083439972035,1.88692780957538,3.03287304095537,2.4028302854641,1.12507910687956,1.42506371870624,0.99458338599545,0.730656615058536,0,0,0,0,0,0.574752439954483,0.661044872784862,0,0,0,0,0,0.560508562981536,0.263384084775077,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0.150575119077773,0.127986611154418,0,1.4206635122641,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0.324547393654683,0,0.132957960518865,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,79.068250461638,73.6782501881818,0,0,0,0.397227542439656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=7439 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=12703 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=126bp_to_uc010rlv.1_5end | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_7_at_BEST1_5end | |||
|id=chr11:61722830..61722841,+ | |||
|ontology_enrichment_celltype=CL:0002057!4.75e-67!42;CL:0000766!2.40e-66!76;CL:0000860!1.42e-61!45;CL:0002009!1.74e-54!65;CL:0002194!2.91e-54!63;CL:0000576!2.91e-54!63;CL:0000040!2.91e-54!63;CL:0000559!2.91e-54!63;CL:0000557!7.83e-53!71;CL:0000839!1.54e-51!70;CL:0000738!2.33e-42!140;CL:0000763!1.35e-40!112;CL:0000049!1.35e-40!112;CL:0002087!3.01e-34!119;CL:0002031!2.82e-33!124;CL:0000037!1.07e-31!172;CL:0000566!1.07e-31!172;CL:0002032!3.71e-30!165;CL:0000837!3.71e-30!165;CL:0000988!8.50e-29!182;CL:0002393!7.69e-15!9;CL:0002397!7.69e-15!9;CL:0000094!1.36e-14!8;CL:0000134!1.69e-13!358;CL:0002320!8.27e-13!365;CL:0000048!8.63e-12!430;CL:0000034!1.00e-11!444;CL:0000723!2.69e-11!436;CL:0000219!2.06e-10!390;CL:0000081!4.44e-10!11;CL:0000775!5.79e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.99e-81;33!CL:0002057;9.99e-81;33!CL:0000576;1.37e-56;48!CL:0000473;4.12e-56;39!CL:0000234;4.12e-56;39!CL:0000766;8.10e-39;69!CL:0002393;3.72e-22;6!CL:0002397;3.72e-22;6!CL:0000094;7.62e-19;8!CL:0000763;3.78e-17;100!CL:0000775;7.28e-14;3!CL:0000081;1.63e-13;11!CL:0002087;2.80e-13;104!CL:0000738;6.30e-12;136!CL:0000771;6.62e-10;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.26e-106,42;CL:0002057,1.26e-106,42;CL:0000473,2.83e-92,48;CL:0000234,2.83e-92,48;CL:0000766,6.15e-83,72;CL:0002194,3.51e-72,59;CL:0000576,3.51e-72,59;CL:0000040,3.51e-72,59;CL:0000559,3.51e-72,59;CL:0002009,1.38e-69,61;CL:0000839,8.81e-64,66;CL:0000557,1.01e-62,67;CL:0000763,1.48e-52,108;CL:0000049,1.48e-52,108;CL:0000738,1.68e-44,136;CL:0002087,8.00e-38,115;CL:0000037,2.60e-34,168;CL:0002032,3.00e-34,161;CL:0000837,3.00e-34,161;CL:0002031,9.95e-34,120;CL:0000988,4.19e-32,177;CL:0002393,1.18e-19,9;CL:0002397,1.18e-19,9;CL:0000094,7.41e-19,8;CL:0000775,7.29e-14,3;CL:0000081,1.60e-13,11;CL:0000134,2.03e-11,354;CL:0002320,5.12e-11,361;CL:0000771,6.63e-10,2;CL:0000219,1.33e-09,386;CL:0000048,7.06e-08,427;CL:0000723,1.22e-07,433;CL:0000034,2.47e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;1.17e-76;42!CL:0000049;2.93e-17;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.29e-58!102;UBERON:0003061!5.29e-58!102;UBERON:0002193!1.26e-54!112;UBERON:0002371!5.71e-47!80;UBERON:0001474!1.62e-42!86;UBERON:0004765!1.01e-33!101;UBERON:0001434!1.01e-33!101;UBERON:0002405!1.04e-32!115;UBERON:0003081!7.15e-21!216;UBERON:0002204!9.71e-21!167;UBERON:0000178!2.61e-13!15;UBERON:0000179!2.61e-13!15;UBERON:0000463!2.61e-13!15;UBERON:0002384!7.11e-12!375;UBERON:0000926!4.12e-07!448;UBERON:0004120!4.12e-07!448;UBERON:0006603!4.12e-07!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;8.93e-21;15!UBERON:0000179;8.93e-21;15!UBERON:0000463;8.93e-21;15!UBERON:0002390;2.27e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.28e-68,98;UBERON:0003061,1.28e-68,98;UBERON:0002193,1.81e-61,108;UBERON:0002371,1.97e-54,76;UBERON:0001474,6.68e-50,82;UBERON:0004765,8.60e-45,90;UBERON:0002405,4.23e-43,93;UBERON:0001434,1.52e-39,100;UBERON:0003081,1.83e-28,203;UBERON:0000178,8.54e-21,15;UBERON:0000179,8.54e-21,15;UBERON:0000463,8.54e-21,15;UBERON:0002204,1.64e-20,167;UBERON:0000926,5.26e-15,315;UBERON:0004120,5.26e-15,315;UBERON:0006603,5.26e-15,315;UBERON:0002384,1.81e-10,371 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0.140954404095971,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0.767658796194425,1.54816123316076,0,0,0,0,0,0.293600439334847,1.10799081706375,2.4065333696417,1.95309783644267,0,0.32389366601898,0.257575567634187,1.89017710413434,1.51150377475524,1.4555043671269,2.32429036905685,2.46700732813095,3.09706370895104,0.575384784644301,2.30544635876191,3.78371567821736,2.75796544589295,3.22742341791913,5.41705946377367,4.1413314699373,5.18521685109907,4.71919317334678,2.75475503133812,2.56743221660875,1.91801137739712,1.31940520074686,2.19410023383795,2.55734850319616,0.290209238628584,0.56738522469114,0.622822248995575,2.51248665256743,2.60741459210101,5.2125322729228,1.81619850790011,1.10483290796269,0.632924774881769,1.26753171787165,1.70083439972035,1.88692780957538,3.03287304095537,2.4028302854641,1.12507910687956,1.42506371870624,0.99458338599545,0.730656615058536,0,0,0,0,0,0.574752439954483,0.661044872784862,0,0,0,0,0,0.560508562981536,0.263384084775077,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0.150575119077773,0.127986611154418,0,1.4206635122641,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0.324547393654683,0,0.132957960518865,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,79.068250461638,73.6782501881818,0,0,0,0.397227542439656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0.936017060556951,0.743155811443641,0,0,0,0,0,0,0,0,0,0.144119953416961,0.6312121671319,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,59.9205619157746,44.8742188806037,67.9641442035098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72571360654893,0.960548020230999,0,0,0,0,0.460385919864187,0,0.128139149255701,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0.229628896329213,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0.15350367472613,0,0.107420244868274,0.290033387828457,0,0.178064071293475,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,8.11916174771471,0.764637207142375,2.27858874869665,3.81170840732462,5.75907182320672,5.83625980073446,6.48037724685738,3.96562588147135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0.992332043623902,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0,0,0,0,0,0,0,0.899606224327209,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0.286679166302903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0.213233981900981,0,0.0645889098360061,0,0,0,0,0,0,0,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p7@BEST1 | |||
}} |
Revision as of 18:27, 10 September 2013
Short description: | p7@BEST1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_BEST1_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 126bp_to_uc010rlv.1_5end |
EntrezGene: | BEST1 |
HGNC: | 12703 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.28e-68 | 98 |
blood island | 1.28e-68 | 98 |
hemolymphoid system | 1.81e-61 | 108 |
bone marrow | 1.97e-54 | 76 |
bone element | 6.68e-50 | 82 |
skeletal element | 8.60e-45 | 90 |
immune system | 4.23e-43 | 93 |
skeletal system | 1.52e-39 | 100 |
lateral plate mesoderm | 1.83e-28 | 203 |
blood | 8.54e-21 | 15 |
haemolymphatic fluid | 8.54e-21 | 15 |
organism substance | 8.54e-21 | 15 |
musculoskeletal system | 1.64e-20 | 167 |
mesoderm | 5.26e-15 | 315 |
mesoderm-derived structure | 5.26e-15 | 315 |
presumptive mesoderm | 5.26e-15 | 315 |
connective tissue | 1.81e-10 | 371 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.