FFCP PHASE1:Hg19::chr11:68099033..68099038,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C203|description=CAGE_peak_at_chr11:68099033..68099038,-|id=chr11:68099033..68099038,-|ontology_enrichment_celltype=CL:0002139!3.46e-22!24;CL:0000115!7.42e-18!35;CL:0000071!1.04e-14!18;CL:0002546!1.04e-14!18;CL:0002078!9.13e-14!44;CL:1000413!2.02e-10!9;CL:0000213!3.82e-10!57;CL:0000215!3.82e-10!57;CL:0005020!2.07e-09!6;CL:0002138!2.07e-09!6;CL:0005022!2.07e-09!6;CL:0002544!2.82e-09!6;CL:0002618!2.42e-08!3;CL:0000181!7.96e-08!12;CL:0000417!7.96e-08!12;CL:0000668!7.96e-08!12;CL:0000414!7.96e-08!12;CL:0000412!7.96e-08!12;CL:0000182!7.96e-08!12|ontology_enrichment_celltype_v019=CL:0002138;6.78e-23;6!CL:0002262;9.07e-18;2!CL:1000398;9.07e-18;2!CL:0002139;4.11e-13;24!CL:0002144;2.59e-12;3!CL:0000115;7.93e-12;36!CL:0002078;1.50e-10;45|ontology_enrichment_celltype_v019_2=CL:0005020,9.46e-23,6;CL:0002138,9.46e-23,6;CL:0005022,9.46e-23,6;CL:0002262,7.67e-18,2;CL:1000398,7.67e-18,2;CL:0000115,3.57e-15,36;CL:0002139,4.65e-13,24;CL:0002144,2.59e-12,3;CL:0002078,2.91e-12,45;CL:0000213,1.22e-09,58;CL:0000215,1.22e-09,58|ontology_enrichment_development_v019=CL:0005022;6.78e-23;6|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001986!1.04e-14!18;UBERON:0004638!1.04e-14!18;UBERON:0004852!1.04e-14!18;UBERON:0000487!7.18e-12!22;UBERON:0003915!2.02e-10!9;UBERON:0004700!2.02e-10!9;UBERON:0001917!2.02e-10!9;UBERON:0006914!2.45e-10!25;UBERON:0005057!1.27e-09!26;UBERON:0002465!1.96e-09!10;UBERON:0000055!5.08e-08!69;UBERON:0002106!5.42e-08!3;UBERON:0004854!5.42e-08!3;UBERON:0009034!5.42e-08!3;UBERON:0002095!5.42e-08!3;UBERON:0004782!5.42e-08!3;UBERON:0003281!5.42e-08!3;UBERON:0009664!5.42e-08!3;UBERON:0002296!5.42e-08!3;UBERON:0005602!5.42e-08!3;UBERON:0001179!5.42e-08!3;UBERON:0006293!5.42e-08!3;UBERON:0004177!2.09e-07!7;UBERON:0001473!3.69e-07!8;UBERON:0004536!3.69e-07!8;UBERON:0006558!3.69e-07!8;UBERON:0002171!4.25e-07!1;UBERON:0006518!4.25e-07!1;UBERON:0008949!4.25e-07!1;UBERON:0000101!4.25e-07!1;UBERON:0002167!4.25e-07!1;UBERON:0002372!8.98e-07!1;UBERON:0001961!8.98e-07!1;UBERON:0001744!8.98e-07!1;UBERON:0001735!8.98e-07!1;UBERON:0002049!9.48e-07!79;UBERON:0007798!9.48e-07!79|ontology_enrichment_uberon_v019=UBERON:0001281;9.07e-18;2!UBERON:0003497;9.07e-18;2!UBERON:0003909;9.07e-18;2!UBERON:0003835;9.07e-18;2!UBERON:0001473;1.85e-17;8!UBERON:0004536;1.85e-17;8!UBERON:0006558;1.85e-17;8!UBERON:0002465;3.47e-14;10!UBERON:0010523;2.59e-12;3!UBERON:0001915;2.59e-12;3!UBERON:0001280;2.59e-12;3!UBERON:0004647;2.59e-12;3!UBERON:0001982;2.59e-12;3|ontology_enrichment_uberon_v019_2=UBERON:0001281,7.67e-18,2;UBERON:0003497,7.67e-18,2;UBERON:0003909,7.67e-18,2;UBERON:0003835,7.67e-18,2;UBERON:0001473,2.38e-17,8;UBERON:0004536,2.38e-17,8;UBERON:0006558,2.38e-17,8;UBERON:0002465,4.24e-14,10;UBERON:0001280,2.31e-12,3;UBERON:0004647,2.31e-12,3;UBERON:0005171,2.31e-12,3;UBERON:0010523,2.59e-12,3;UBERON:0001915,2.59e-12,3;UBERON:0001982,2.59e-12,3;UBERON:0000055,2.68e-08,68;UBERON:0002049,2.70e-07,78;UBERON:0007798,2.70e-07,78;UBERON:0002394,8.02e-07,6;UBERON:0003928,8.02e-07,6|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411202997999018,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0.829050053357545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.694281003215189,0.56530794192401,0,0,0.208994966536811,0,0,0,0,0,1.46437234528902,0.367663080345869,0,0.0892997282840798,0,0.450445921933289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4763109092493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29929802984966,0.462985512576611,1.14152491340759,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7235483311913,7.83192256078367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315132729228895,0.247247575143499,0.337017719270924,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124149428591716,0,0,0,0,0,0.134704106029175,0,0.665320713092027,0,0,0,0,0,0,0,0,0,0|short_description=p@chr11:68099033..68099038,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C203 | |||
|description=CAGE_peak_at_chr11:68099033..68099038,- | |||
|id=chr11:68099033..68099038,- | |||
|ontology_enrichment_celltype=CL:0002139!3.46e-22!24;CL:0000115!7.42e-18!35;CL:0000071!1.04e-14!18;CL:0002546!1.04e-14!18;CL:0002078!9.13e-14!44;CL:1000413!2.02e-10!9;CL:0000213!3.82e-10!57;CL:0000215!3.82e-10!57;CL:0005020!2.07e-09!6;CL:0002138!2.07e-09!6;CL:0005022!2.07e-09!6;CL:0002544!2.82e-09!6;CL:0002618!2.42e-08!3;CL:0000181!7.96e-08!12;CL:0000417!7.96e-08!12;CL:0000668!7.96e-08!12;CL:0000414!7.96e-08!12;CL:0000412!7.96e-08!12;CL:0000182!7.96e-08!12 | |||
|ontology_enrichment_celltype_v019=CL:0002138;6.78e-23;6!CL:0002262;9.07e-18;2!CL:1000398;9.07e-18;2!CL:0002139;4.11e-13;24!CL:0002144;2.59e-12;3!CL:0000115;7.93e-12;36!CL:0002078;1.50e-10;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0005020,9.46e-23,6;CL:0002138,9.46e-23,6;CL:0005022,9.46e-23,6;CL:0002262,7.67e-18,2;CL:1000398,7.67e-18,2;CL:0000115,3.57e-15,36;CL:0002139,4.65e-13,24;CL:0002144,2.59e-12,3;CL:0002078,2.91e-12,45;CL:0000213,1.22e-09,58;CL:0000215,1.22e-09,58 | |||
|ontology_enrichment_development_v019=CL:0005022;6.78e-23;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!1.04e-14!18;UBERON:0004638!1.04e-14!18;UBERON:0004852!1.04e-14!18;UBERON:0000487!7.18e-12!22;UBERON:0003915!2.02e-10!9;UBERON:0004700!2.02e-10!9;UBERON:0001917!2.02e-10!9;UBERON:0006914!2.45e-10!25;UBERON:0005057!1.27e-09!26;UBERON:0002465!1.96e-09!10;UBERON:0000055!5.08e-08!69;UBERON:0002106!5.42e-08!3;UBERON:0004854!5.42e-08!3;UBERON:0009034!5.42e-08!3;UBERON:0002095!5.42e-08!3;UBERON:0004782!5.42e-08!3;UBERON:0003281!5.42e-08!3;UBERON:0009664!5.42e-08!3;UBERON:0002296!5.42e-08!3;UBERON:0005602!5.42e-08!3;UBERON:0001179!5.42e-08!3;UBERON:0006293!5.42e-08!3;UBERON:0004177!2.09e-07!7;UBERON:0001473!3.69e-07!8;UBERON:0004536!3.69e-07!8;UBERON:0006558!3.69e-07!8;UBERON:0002171!4.25e-07!1;UBERON:0006518!4.25e-07!1;UBERON:0008949!4.25e-07!1;UBERON:0000101!4.25e-07!1;UBERON:0002167!4.25e-07!1;UBERON:0002372!8.98e-07!1;UBERON:0001961!8.98e-07!1;UBERON:0001744!8.98e-07!1;UBERON:0001735!8.98e-07!1;UBERON:0002049!9.48e-07!79;UBERON:0007798!9.48e-07!79 | |||
|ontology_enrichment_uberon_v019=UBERON:0001281;9.07e-18;2!UBERON:0003497;9.07e-18;2!UBERON:0003909;9.07e-18;2!UBERON:0003835;9.07e-18;2!UBERON:0001473;1.85e-17;8!UBERON:0004536;1.85e-17;8!UBERON:0006558;1.85e-17;8!UBERON:0002465;3.47e-14;10!UBERON:0010523;2.59e-12;3!UBERON:0001915;2.59e-12;3!UBERON:0001280;2.59e-12;3!UBERON:0004647;2.59e-12;3!UBERON:0001982;2.59e-12;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001281,7.67e-18,2;UBERON:0003497,7.67e-18,2;UBERON:0003909,7.67e-18,2;UBERON:0003835,7.67e-18,2;UBERON:0001473,2.38e-17,8;UBERON:0004536,2.38e-17,8;UBERON:0006558,2.38e-17,8;UBERON:0002465,4.24e-14,10;UBERON:0001280,2.31e-12,3;UBERON:0004647,2.31e-12,3;UBERON:0005171,2.31e-12,3;UBERON:0010523,2.59e-12,3;UBERON:0001915,2.59e-12,3;UBERON:0001982,2.59e-12,3;UBERON:0000055,2.68e-08,68;UBERON:0002049,2.70e-07,78;UBERON:0007798,2.70e-07,78;UBERON:0002394,8.02e-07,6;UBERON:0003928,8.02e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411202997999018,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0.829050053357545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.694281003215189,0.56530794192401,0,0,0.208994966536811,0,0,0,0,0,1.46437234528902,0.367663080345869,0,0.0892997282840798,0,0.450445921933289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4763109092493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29929802984966,0.462985512576611,1.14152491340759,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7235483311913,7.83192256078367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315132729228895,0.247247575143499,0.337017719270924,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124149428591716,0,0,0,0,0,0.134704106029175,0,0.665320713092027,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:68099033..68099038,- | |||
}} |
Revision as of 19:20, 10 September 2013
Short description: | p@chr11:68099033..68099038, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:68099033..68099038, - |
Coexpression cluster: | C203_acute_NK_chronic_CD133_lymphoma_immature_Dendritic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphangioblast | 9.46e-23 | 6 |
endothelial cell of lymphatic vessel | 9.46e-23 | 6 |
vascular lymphangioblast | 9.46e-23 | 6 |
endothelial cell of sinusoid | 7.67e-18 | 2 |
endothelial cell of hepatic sinusoid | 7.67e-18 | 2 |
endothelial cell | 3.57e-15 | 36 |
endothelial cell of vascular tree | 4.65e-13 | 24 |
capillary endothelial cell | 2.59e-12 | 3 |
meso-epithelial cell | 2.91e-12 | 45 |
lining cell | 1.22e-09 | 58 |
barrier cell | 1.22e-09 | 58 |
Ontology term | p-value | n |
---|---|---|
hepatic sinusoid | 7.67e-18 | 2 |
abdomen blood vessel | 7.67e-18 | 2 |
sinusoid | 7.67e-18 | 2 |
abdominal segment blood vessel | 7.67e-18 | 2 |
lymphatic vessel | 2.38e-17 | 8 |
lymph vasculature | 2.38e-17 | 8 |
lymphatic part of lymphoid system | 2.38e-17 | 8 |
lymphoid system | 4.24e-14 | 10 |
liver parenchyma | 2.31e-12 | 3 |
liver lobule | 2.31e-12 | 3 |
hepatic duct | 2.31e-12 | 3 |
microcirculatory vessel | 2.59e-12 | 3 |
endothelium of capillary | 2.59e-12 | 3 |
capillary | 2.59e-12 | 3 |
vessel | 2.68e-08 | 68 |
vasculature | 2.70e-07 | 78 |
vascular system | 2.70e-07 | 78 |
bile duct | 8.02e-07 | 6 |
digestive system duct | 8.02e-07 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.