FFCP PHASE1:Hg19::chr12:111020600..111020632,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C686|description=CAGE_peak_at_chr12:111020600..111020632,+|id=chr12:111020600..111020632,+|ontology_enrichment_celltype=CL:0000738!2.14e-59!140;CL:0002057!3.74e-46!42;CL:0002031!2.61e-45!124;CL:0002087!1.51e-44!119;CL:0000037!2.88e-43!172;CL:0000566!2.88e-43!172;CL:0000988!4.29e-42!182;CL:0000860!6.43e-42!45;CL:0002032!1.28e-38!165;CL:0000837!1.28e-38!165;CL:0000766!2.33e-38!76;CL:0000557!7.45e-32!71;CL:0002009!8.63e-31!65;CL:0000839!4.15e-29!70;CL:0002194!1.05e-28!63;CL:0000576!1.05e-28!63;CL:0000040!1.05e-28!63;CL:0000559!1.05e-28!63;CL:0000763!5.99e-24!112;CL:0000049!5.99e-24!112;CL:0000134!3.37e-15!358;CL:0002320!2.87e-14!365;CL:0000838!1.06e-13!52;CL:0000542!2.98e-13!53;CL:0000051!2.98e-13!53;CL:0000219!1.92e-11!390;CL:0002393!2.25e-11!9;CL:0002397!2.25e-11!9;CL:0000094!6.43e-10!8;CL:0000048!1.43e-08!430;CL:0000081!2.64e-08!11;CL:0000034!3.00e-08!444;CL:0000723!4.76e-08!436;CL:0000624!2.67e-07!6;CL:0000791!3.39e-07!18;CL:0000789!3.39e-07!18;CL:0002420!3.39e-07!18;CL:0002419!3.39e-07!18;CL:0000790!3.39e-07!18|ontology_enrichment_celltype_v019=CL:0000860;3.24e-55;33!CL:0002057;3.24e-55;33!CL:0000576;1.49e-42;48!CL:0000473;4.14e-38;39!CL:0000234;4.14e-38;39!CL:0000766;2.39e-33;69!CL:0002087;4.50e-19;104!CL:0000094;7.25e-17;8!CL:0000738;8.97e-16;136!CL:0000763;1.01e-14;100!CL:0000081;1.09e-14;11!CL:0002393;2.67e-14;6!CL:0002397;2.67e-14;6!CL:0000988;2.58e-11;177!CL:0000623;1.70e-08;3!CL:0000219;2.72e-08;193!CL:0000767;2.64e-07;3!CL:0000784;5.70e-07;3!CL:0000875;6.34e-07;3!CL:0002396;6.34e-07;3!CL:0000226;6.83e-07;3!CL:0000842;6.83e-07;3!CL:0000775;8.71e-07;3|ontology_enrichment_celltype_v019_2=CL:0000860,4.82e-80,42;CL:0002057,4.82e-80,42;CL:0000738,2.86e-79,136;CL:0000766,7.24e-74,72;CL:0000473,1.87e-68,48;CL:0000234,1.87e-68,48;CL:0000037,1.90e-62,168;CL:0000557,9.80e-62,67;CL:0000988,4.96e-60,177;CL:0002009,5.88e-59,61;CL:0002031,1.01e-57,120;CL:0000839,1.05e-56,66;CL:0002087,1.98e-55,115;CL:0002194,5.67e-55,59;CL:0000576,5.67e-55,59;CL:0000040,5.67e-55,59;CL:0000559,5.67e-55,59;CL:0002032,2.36e-54,161;CL:0000837,2.36e-54,161;CL:0000763,1.16e-50,108;CL:0000049,1.16e-50,108;CL:0000134,6.11e-25,354;CL:0002320,4.56e-24,361;CL:0000219,5.40e-21,386;CL:0002393,1.47e-19,9;CL:0002397,1.47e-19,9;CL:0000034,1.08e-17,441;CL:0000048,3.04e-17,427;CL:0000094,6.95e-17,8;CL:0000723,1.00e-16,433;CL:0000081,1.10e-14,11;CL:0000623,1.56e-08,3;CL:0000825,1.56e-08,3;CL:0000767,2.59e-07,3;CL:0000784,5.64e-07,3;CL:0000875,6.55e-07,3;CL:0002396,6.55e-07,3;CL:0000226,6.98e-07,3;CL:0000842,6.98e-07,3;CL:0000775,8.44e-07,3|ontology_enrichment_development_v019=CL:0002057;4.50e-56;42!CL:0000049;4.35e-13;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!1.64e-29!102;UBERON:0003061!1.64e-29!102;UBERON:0002371!1.38e-27!80;UBERON:0002193!6.15e-27!112;UBERON:0001474!2.20e-24!86;UBERON:0004765!6.07e-19!101;UBERON:0001434!6.07e-19!101;UBERON:0002405!1.16e-18!115;UBERON:0002384!1.83e-13!375;UBERON:0003081!2.69e-09!216;UBERON:0002204!4.31e-07!167|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.48e-55,76;UBERON:0002390,5.57e-52,98;UBERON:0003061,5.57e-52,98;UBERON:0001474,2.66e-50,82;UBERON:0002193,8.63e-46,108;UBERON:0002405,7.92e-45,93;UBERON:0004765,1.24e-44,90;UBERON:0001434,8.07e-39,100;UBERON:0002384,7.07e-23,371;UBERON:0002204,6.05e-18,167;UBERON:0003081,1.55e-17,203|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.246301768349837,0.236132343941038,5.90046415273356,2.30297638858328,8.3600706590681,0,0,0,0,0,2.64240395401362,13.8498852132969,14.4392002178502,17.3608696572681,0.223915474239924,0,0,1.45398238779565,0.755751887377619,3.15359279544161,5.81072592264212,4.93401465626191,8.981484755958,6.61692502340946,6.40401766322752,7.80391358632331,26.200671735983,14.2006630388442,9.47985406160392,4.1413314699373,3.0019676506363,3.14612878223118,13.1616073719488,6.41858054152187,12.1474053901818,1.64925650093358,1.99463657621632,3.40979800426155,12.1887880224005,8.5107783703671,7.4738669879469,4.01997864410789,5.73631210262222,4.99534342821768,5.44859552370032,4.78760926783834,5.06339819905415,2.74631872205524,8.50417199860174,8.80566311135179,1.79725809834392,3.75442232103766,2.89306056054744,6.27028036230747,2.18808344918999,2.55729815270488,1.75996244461323,0.546138611262131,0,2.13365111283254,0.400395987036012,0.574752439954483,0,0.954053754535364,12.5226853204079,9.39579502993502,8.41001101875504,7.93027971474155,7.28661131875997,0,7.27826149421182,9.82526906872912,5.14003747498773,1.00311897234407,0.651844533267181,0.473447805734733,0,0.779873198196215,0.589211814949674,0.664601683750863,0.812411591295047,1.0247305578054,2.08094956095805,0.493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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C686 | |||
|description=CAGE_peak_at_chr12:111020600..111020632,+ | |||
|id=chr12:111020600..111020632,+ | |||
|ontology_enrichment_celltype=CL:0000738!2.14e-59!140;CL:0002057!3.74e-46!42;CL:0002031!2.61e-45!124;CL:0002087!1.51e-44!119;CL:0000037!2.88e-43!172;CL:0000566!2.88e-43!172;CL:0000988!4.29e-42!182;CL:0000860!6.43e-42!45;CL:0002032!1.28e-38!165;CL:0000837!1.28e-38!165;CL:0000766!2.33e-38!76;CL:0000557!7.45e-32!71;CL:0002009!8.63e-31!65;CL:0000839!4.15e-29!70;CL:0002194!1.05e-28!63;CL:0000576!1.05e-28!63;CL:0000040!1.05e-28!63;CL:0000559!1.05e-28!63;CL:0000763!5.99e-24!112;CL:0000049!5.99e-24!112;CL:0000134!3.37e-15!358;CL:0002320!2.87e-14!365;CL:0000838!1.06e-13!52;CL:0000542!2.98e-13!53;CL:0000051!2.98e-13!53;CL:0000219!1.92e-11!390;CL:0002393!2.25e-11!9;CL:0002397!2.25e-11!9;CL:0000094!6.43e-10!8;CL:0000048!1.43e-08!430;CL:0000081!2.64e-08!11;CL:0000034!3.00e-08!444;CL:0000723!4.76e-08!436;CL:0000624!2.67e-07!6;CL:0000791!3.39e-07!18;CL:0000789!3.39e-07!18;CL:0002420!3.39e-07!18;CL:0002419!3.39e-07!18;CL:0000790!3.39e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.24e-55;33!CL:0002057;3.24e-55;33!CL:0000576;1.49e-42;48!CL:0000473;4.14e-38;39!CL:0000234;4.14e-38;39!CL:0000766;2.39e-33;69!CL:0002087;4.50e-19;104!CL:0000094;7.25e-17;8!CL:0000738;8.97e-16;136!CL:0000763;1.01e-14;100!CL:0000081;1.09e-14;11!CL:0002393;2.67e-14;6!CL:0002397;2.67e-14;6!CL:0000988;2.58e-11;177!CL:0000623;1.70e-08;3!CL:0000219;2.72e-08;193!CL:0000767;2.64e-07;3!CL:0000784;5.70e-07;3!CL:0000875;6.34e-07;3!CL:0002396;6.34e-07;3!CL:0000226;6.83e-07;3!CL:0000842;6.83e-07;3!CL:0000775;8.71e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.82e-80,42;CL:0002057,4.82e-80,42;CL:0000738,2.86e-79,136;CL:0000766,7.24e-74,72;CL:0000473,1.87e-68,48;CL:0000234,1.87e-68,48;CL:0000037,1.90e-62,168;CL:0000557,9.80e-62,67;CL:0000988,4.96e-60,177;CL:0002009,5.88e-59,61;CL:0002031,1.01e-57,120;CL:0000839,1.05e-56,66;CL:0002087,1.98e-55,115;CL:0002194,5.67e-55,59;CL:0000576,5.67e-55,59;CL:0000040,5.67e-55,59;CL:0000559,5.67e-55,59;CL:0002032,2.36e-54,161;CL:0000837,2.36e-54,161;CL:0000763,1.16e-50,108;CL:0000049,1.16e-50,108;CL:0000134,6.11e-25,354;CL:0002320,4.56e-24,361;CL:0000219,5.40e-21,386;CL:0002393,1.47e-19,9;CL:0002397,1.47e-19,9;CL:0000034,1.08e-17,441;CL:0000048,3.04e-17,427;CL:0000094,6.95e-17,8;CL:0000723,1.00e-16,433;CL:0000081,1.10e-14,11;CL:0000623,1.56e-08,3;CL:0000825,1.56e-08,3;CL:0000767,2.59e-07,3;CL:0000784,5.64e-07,3;CL:0000875,6.55e-07,3;CL:0002396,6.55e-07,3;CL:0000226,6.98e-07,3;CL:0000842,6.98e-07,3;CL:0000775,8.44e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;4.50e-56;42!CL:0000049;4.35e-13;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.64e-29!102;UBERON:0003061!1.64e-29!102;UBERON:0002371!1.38e-27!80;UBERON:0002193!6.15e-27!112;UBERON:0001474!2.20e-24!86;UBERON:0004765!6.07e-19!101;UBERON:0001434!6.07e-19!101;UBERON:0002405!1.16e-18!115;UBERON:0002384!1.83e-13!375;UBERON:0003081!2.69e-09!216;UBERON:0002204!4.31e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.48e-55,76;UBERON:0002390,5.57e-52,98;UBERON:0003061,5.57e-52,98;UBERON:0001474,2.66e-50,82;UBERON:0002193,8.63e-46,108;UBERON:0002405,7.92e-45,93;UBERON:0004765,1.24e-44,90;UBERON:0001434,8.07e-39,100;UBERON:0002384,7.07e-23,371;UBERON:0002204,6.05e-18,167;UBERON:0003081,1.55e-17,203 | |||
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|short_description=p@chr12:111020600..111020632,+ | |||
}} |
Revision as of 20:51, 10 September 2013
Short description: | p@chr12:111020600..111020632, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:111020600..111020632, + |
Coexpression cluster: | C686_CD14_immature_CD19_Eosinophils_migratory_Mast_Basophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.48e-55 | 76 |
hematopoietic system | 5.57e-52 | 98 |
blood island | 5.57e-52 | 98 |
bone element | 2.66e-50 | 82 |
hemolymphoid system | 8.63e-46 | 108 |
immune system | 7.92e-45 | 93 |
skeletal element | 1.24e-44 | 90 |
skeletal system | 8.07e-39 | 100 |
connective tissue | 7.07e-23 | 371 |
musculoskeletal system | 6.05e-18 | 167 |
lateral plate mesoderm | 1.55e-17 | 203 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.