FFCP PHASE1:Hg19::chr12:26111512..26111556,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=11228|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=13232|TSSclassifier=W|UniProt=|association_with_transcript=-405bp_to_ENST00000381352_5end|description=CAGE_peak_3_at_RASSF8_5end|id=chr12:26111512..26111556,+|ontology_enrichment_celltype=CL:0000055!7.83e-10!180|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!1.75e-13!169;UBERON:0000073!1.80e-13!94;UBERON:0001016!1.80e-13!94;UBERON:0000924!2.42e-13!173;UBERON:0006601!2.42e-13!173;UBERON:0005743!2.90e-12!86;UBERON:0000475!7.15e-12!365;UBERON:0000033!1.19e-11!123;UBERON:0001017!1.20e-11!82;UBERON:0000468!5.00e-11!659;UBERON:0003075!5.31e-11!86;UBERON:0007284!5.31e-11!86;UBERON:0002346!1.04e-10!90;UBERON:0000153!1.14e-10!129;UBERON:0007811!1.14e-10!129;UBERON:0000955!1.67e-08!69;UBERON:0006238!1.67e-08!69;UBERON:0001049!2.63e-08!57;UBERON:0005068!2.63e-08!57;UBERON:0006241!2.63e-08!57;UBERON:0007135!2.63e-08!57;UBERON:0000119!5.03e-08!312;UBERON:0003056!5.27e-08!61;UBERON:0000477!5.81e-08!286;UBERON:0000483!1.05e-07!309;UBERON:0000480!4.00e-07!626;UBERON:0000467!5.14e-07!625;UBERON:0000064!5.68e-07!219;UBERON:0000481!6.52e-07!347;UBERON:0000922!6.67e-07!612;UBERON:0002616!7.51e-07!59|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0010314,2.12e-13,132;UBERON:0004121,2.74e-11,171;UBERON:0000924,2.74e-11,171;UBERON:0006601,2.74e-11,171;UBERON:0001016,7.92e-11,89;UBERON:0002346,6.89e-10,86;UBERON:0003075,7.46e-10,82;UBERON:0007284,7.46e-10,82;UBERON:0001017,1.99e-09,81;UBERON:0010371,9.12e-08,104|phase1_expression=1.99846217197612,0.856402095563933,2.39622486963151,0,0.446961094427288,1.74467704820074,0,0,0.522371256399677,0,0,0.873765488520689,0.263766978228454,0.495065411840187,0.331397375727916,1.34465029290355,0.602694528023977,0.730310090387373,0.487932798790507,0.492484232307152,0.408001382488506,0,0.572471974262113,1.36874425072884,1.00434111675842,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0.224723484445085,0.306083892370903,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0.263384084775077,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0,0.164437904603676,0.276350017785848,0.289803085735052,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,1.34140171940727,0.639312809217652,1.44575660953827,2.50668955317945,1.59331170856906,0.795285947051099,1.94653948121054,2.07976597760949,1.55210578223795,1.66886092816939,1.57174890597255,0,0.370784442784429,0,0,0,1.66943437013739,0,1.85728750664782,0.596287222100115,0.860234595106124,1.38856200643038,2.26123176769604,0,0.275118041940067,1.67195973229448,1.03366703667732,1.06729878806013,0,1.20848795132744,0,0.976248230192678,2.20597848207521,1.62028389576352,0.982297011124877,1.57170560838319,1.0135033243499,1.53316637465883,0.949265659568129,0.732806975721629,0,0,0,2.48485975847659,0.759783069987479,0.662045904066094,0.573673241497627,1.06400514659507,0,0,0.49333509683432,1.24484414159907,1.34710672069688,2.12500474047496,0.605429710579726,0,0.468642863667593,2.49728061464256,0.570471821544449,1.49448680551801,1.40921398372518,2.10434827678571,1.12360645361799,1.83738754129404,0.982674538494144,0.723280468230358,1.18800285728205,1.7308685049499,0,0,0.336672227908132,2.12701483782339,1.10825646193673,2.63386572528503,0.919463387397059,2.10333282469236,1.81491493056034,2.15267562826634,1.2813443329114,0.635795703478686,1.80054657650641,1.13357782162283,0.515281080091258,0.744467425326359,1.68776332241266,1.07180705677318,2.01947019395292,1.56484827691909,0.80823028409406,0.710019185033229,1.30977727695932,0.67824236924195,0.386521706326594,0.545492241181669,0.573609190778008,1.58565817968474,2.25300606146525,1.62671520017326,1.24393266018445,1.26160425437814,2.18986415445498,1.56449532329816,1.92972281457866,0,1.85747171212792,0,0.591534000199219,1.01150814046861,1.20505514941741,1.10293972732394,0.871517776369625,0.474541238222193,0.134831308160164,0.196221465125346,1.53898862778556,0.738155454624648,0,0.4115740113314,0,0,0.982827216677626,0.590789906681404,0,0.122988438543114,1.3725424823882,0.548751427043128,1.1240175325762,0.804231779293047,0.925884451585296,0.325808305310325,0,1.44331342025273,1.39116485970092,1.40890433082986,1.01056513432752,0.462985512576611,1.52203321787679,0.790204397959275,0.858486162094873,0,0.468008530278475,0.594524649154913,0.93733833986777,0.16798212819886,0.850650583454319,0.358234090811393,0.290633938513962,0.383382679165211,0,0,0.414656231081544,0.432359860250884,0.12624243342638,1.77794104018073,0.381988425558278,0,0,0.616964956219941,0.300343057843917,0.857479297891735,1.00917975910825,1.30788020649984,0.95339771567235,0.904902010304444,0,0.845302752556,1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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=11228 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13232 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=-405bp_to_ENST00000381352_5end | |||
|description=CAGE_peak_3_at_RASSF8_5end | |||
|id=chr12:26111512..26111556,+ | |||
|ontology_enrichment_celltype=CL:0000055!7.83e-10!180 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!1.75e-13!169;UBERON:0000073!1.80e-13!94;UBERON:0001016!1.80e-13!94;UBERON:0000924!2.42e-13!173;UBERON:0006601!2.42e-13!173;UBERON:0005743!2.90e-12!86;UBERON:0000475!7.15e-12!365;UBERON:0000033!1.19e-11!123;UBERON:0001017!1.20e-11!82;UBERON:0000468!5.00e-11!659;UBERON:0003075!5.31e-11!86;UBERON:0007284!5.31e-11!86;UBERON:0002346!1.04e-10!90;UBERON:0000153!1.14e-10!129;UBERON:0007811!1.14e-10!129;UBERON:0000955!1.67e-08!69;UBERON:0006238!1.67e-08!69;UBERON:0001049!2.63e-08!57;UBERON:0005068!2.63e-08!57;UBERON:0006241!2.63e-08!57;UBERON:0007135!2.63e-08!57;UBERON:0000119!5.03e-08!312;UBERON:0003056!5.27e-08!61;UBERON:0000477!5.81e-08!286;UBERON:0000483!1.05e-07!309;UBERON:0000480!4.00e-07!626;UBERON:0000467!5.14e-07!625;UBERON:0000064!5.68e-07!219;UBERON:0000481!6.52e-07!347;UBERON:0000922!6.67e-07!612;UBERON:0002616!7.51e-07!59 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,2.12e-13,132;UBERON:0004121,2.74e-11,171;UBERON:0000924,2.74e-11,171;UBERON:0006601,2.74e-11,171;UBERON:0001016,7.92e-11,89;UBERON:0002346,6.89e-10,86;UBERON:0003075,7.46e-10,82;UBERON:0007284,7.46e-10,82;UBERON:0001017,1.99e-09,81;UBERON:0010371,9.12e-08,104 | |||
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| |||
|short_description=p3@RASSF8 | |||
}} |
Revision as of 22:16, 10 September 2013
Short description: | p3@RASSF8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_RASSF8_5end |
Coexpression cluster: | NA |
Association with transcript: | -405bp_to_ENST00000381352_5end |
EntrezGene: | RASSF8 |
HGNC: | 13232 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 2.12e-13 | 132 |
ectoderm-derived structure | 2.74e-11 | 171 |
ectoderm | 2.74e-11 | 171 |
presumptive ectoderm | 2.74e-11 | 171 |
nervous system | 7.92e-11 | 89 |
neurectoderm | 6.89e-10 | 86 |
neural plate | 7.46e-10 | 82 |
presumptive neural plate | 7.46e-10 | 82 |
central nervous system | 1.99e-09 | 81 |
ecto-epithelium | 9.12e-08 | 104 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.